| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609196
Identifier: 120609196
GI number: 120609196
Start: 532566
End: 533504
Strand: Reverse
Name: 120609196
Synonym: Aave_0494
Alternate gene names: NA
Gene position: 533504-532566 (Counterclockwise)
Preceding gene: 120609197
Following gene: 120609195
Centisome position: 9.97
GC content: 64.54
Gene sequence:
>939_bases ATGAAACGAAAGATCGTCGCTGCACTCGTCGCAGCCCTTCCATTGCTGGCTTCGGCGTTTCCTGAGAGGCCGATCAAGCT GATCGTGCCCATGGCTGCCGGGAGCATCACCGACGTCGCTGCGCGTTCAGTCGCGGAAGCCATGTCGCAGCGCCTCAAGC AGCCAGTCGTCGTGGACAACCAGCAGAACCTGGTTGGCACGATGGCCGCGGTCCGAGCCGCGCCCGACGGGTACACGCTG CTGATCGTCGGCATCACCAATGCCGCAACCAACGTAATCACCATGAAGTCGCCGCCCTACGATCCGCGCAAGGACTTCAC GCCGATCGGCCAGATGGCCGAGTTGCCCTACCTCCTTGTAGCCAGCACGAAGCTGCCCGCGCAGACGATGAAGGACCTCA TCAGCTACGGGAAGTCACATCCGGACAAGCTGTCCTATGGCTACGGCTCAGGCAGCGCCCAGTTGGCGACGGTGCGCTTT ACGTCGATGGCCAATTTCACCGCGACCGGAGTCGGCTACAAGGGCGTCCCGCAGGCGATGACGGATCTGATGGGTGGCAC CATCGACTTCGTCGTCGCCGATCTGAACAACGGGCTTCAGGCAGCTCGTGCCGGCCGCGTCACGGCGCTCGGGGTGACCT CCGCGAAGCGCTCCCCCCTCGCTCCCGACGTTCCCACGTTGCACGAGCAAGGCCTGGAAGGCTATGACATCTCGGTTCGC TTCGGCCTTGCCGGTCCGGCACACCTGCCCGCCTCCATCACCGAACAGCTCAACGCCGCGTTGCGTGAAGCCCTCAACGA TCCAGCCGTGCGGCAGCGCTTTGACGGCGCGGGCATCGCGATCGTGCCCTCTTCCCCCGAGGTCTTCGCCCGCAACATCC GGGACGACATTGCCAAATGGTCGGCGATCGCTAGGGACGCCGGCATCGCCCCCCAGTAG
Upstream 100 bases:
>100_bases CCATGCCGGCGTCGTTTTCGGCGAGTTGTGACATTGCCCTGCCCAAAGCGGATGCTCGCGGCACCCTACACAAGAACACC AGATCATCGAGGAGAAAACC
Downstream 100 bases:
>100_bases AGGCCGCGCTCTCAGCACCCTCGTCCATCTGCATTGAGGACGGGGCGTCTTCTCGGCTGACCGTGCTCAGCCCGCCCTGG GCGGCTGCGCCCACCTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKRKIVAALVAALPLLASAFPERPIKLIVPMAAGSITDVAARSVAEAMSQRLKQPVVVDNQQNLVGTMAAVRAAPDGYTL LIVGITNAATNVITMKSPPYDPRKDFTPIGQMAELPYLLVASTKLPAQTMKDLISYGKSHPDKLSYGYGSGSAQLATVRF TSMANFTATGVGYKGVPQAMTDLMGGTIDFVVADLNNGLQAARAGRVTALGVTSAKRSPLAPDVPTLHEQGLEGYDISVR FGLAGPAHLPASITEQLNAALREALNDPAVRQRFDGAGIAIVPSSPEVFARNIRDDIAKWSAIARDAGIAPQ
Sequences:
>Translated_312_residues MKRKIVAALVAALPLLASAFPERPIKLIVPMAAGSITDVAARSVAEAMSQRLKQPVVVDNQQNLVGTMAAVRAAPDGYTL LIVGITNAATNVITMKSPPYDPRKDFTPIGQMAELPYLLVASTKLPAQTMKDLISYGKSHPDKLSYGYGSGSAQLATVRF TSMANFTATGVGYKGVPQAMTDLMGGTIDFVVADLNNGLQAARAGRVTALGVTSAKRSPLAPDVPTLHEQGLEGYDISVR FGLAGPAHLPASITEQLNAALREALNDPAVRQRFDGAGIAIVPSSPEVFARNIRDDIAKWSAIARDAGIAPQ >Mature_312_residues MKRKIVAALVAALPLLASAFPERPIKLIVPMAAGSITDVAARSVAEAMSQRLKQPVVVDNQQNLVGTMAAVRAAPDGYTL LIVGITNAATNVITMKSPPYDPRKDFTPIGQMAELPYLLVASTKLPAQTMKDLISYGKSHPDKLSYGYGSGSAQLATVRF TSMANFTATGVGYKGVPQAMTDLMGGTIDFVVADLNNGLQAARAGRVTALGVTSAKRSPLAPDVPTLHEQGLEGYDISVR FGLAGPAHLPASITEQLNAALREALNDPAVRQRFDGAGIAIVPSSPEVFARNIRDDIAKWSAIARDAGIAPQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 32802; Mature: 32802
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKIVAALVAALPLLASAFPERPIKLIVPMAAGSITDVAARSVAEAMSQRLKQPVVVDN CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECC QQNLVGTMAAVRAAPDGYTLLIVGITNAATNVITMKSPPYDPRKDFTPIGQMAELPYLLV CHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHCCEEEE ASTKLPAQTMKDLISYGKSHPDKLSYGYGSGSAQLATVRFTSMANFTATGVGYKGVPQAM ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCEECCCCCCCCHHHH TDLMGGTIDFVVADLNNGLQAARAGRVTALGVTSAKRSPLAPDVPTLHEQGLEGYDISVR HHHHCCCEEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEEE FGLAGPAHLPASITEQLNAALREALNDPAVRQRFDGAGIAIVPSSPEVFARNIRDDIAKW ECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH SAIARDAGIAPQ HHHHHCCCCCCC >Mature Secondary Structure MKRKIVAALVAALPLLASAFPERPIKLIVPMAAGSITDVAARSVAEAMSQRLKQPVVVDN CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECC QQNLVGTMAAVRAAPDGYTLLIVGITNAATNVITMKSPPYDPRKDFTPIGQMAELPYLLV CHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHCCEEEE ASTKLPAQTMKDLISYGKSHPDKLSYGYGSGSAQLATVRFTSMANFTATGVGYKGVPQAM ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCEECCCCCCCCHHHH TDLMGGTIDFVVADLNNGLQAARAGRVTALGVTSAKRSPLAPDVPTLHEQGLEGYDISVR HHHHCCCEEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEEE FGLAGPAHLPASITEQLNAALREALNDPAVRQRFDGAGIAIVPSSPEVFARNIRDDIAKW ECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH SAIARDAGIAPQ HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]