| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609174
Identifier: 120609174
GI number: 120609174
Start: 506937
End: 507386
Strand: Reverse
Name: 120609174
Synonym: Aave_0471
Alternate gene names: NA
Gene position: 507386-506937 (Counterclockwise)
Preceding gene: 120609175
Following gene: 120609173
Centisome position: 9.48
GC content: 69.78
Gene sequence:
>450_bases ATGATCAACGCCCCCTACCCCGCCGCTGCTCCGTACGCCGCCGCCGAAGCGCCGGCCGCGCCCTACCCGGTGATCTACCG CAACCTCATGAGCGTCGCCCTGCTGGGCACCGTGTACCGCGTCGGCAGCGACGCGGACACGATCAGCCGGGCGGTCGAGG CCACGCTCGAGGACTCGAGCACCTACCTGCTCTACCGCATCATCGTGCTGGCCATGGCCGGACAGCGGGGCAAGGAACAC GACCAGCTGCTGCACCACGTGGAGACCCACCCGGAAGACGGCGTGAGCAAGGTCGCCCTGGCGCTCACGCTGCTCTTCAA CGGCGACCCCGCCTGGCGCCACTGGATCGACAACGTGCTGGCGACCAGCGTGGACCAGCCGGTGCGGCAGGCCGCGCAAG GGGTGCTGCATTTCCTGGGCCGGGCCACCCAGAAGCCCGTCATCCACTGA
Upstream 100 bases:
>100_bases GGCCAGCTGGTCGATGCGTTCCAGGTCTCGCAGCGCGTGATCCGCAAGATCTGGGAAACCCTGCACGGCACGACGCTGGC GGTCTGAGGAAGGCACGACC
Downstream 100 bases:
>100_bases AGGGCAGGCCACAAGACACGGCGCGGCGGCGTTGCCGGCGCGCCTCCCGGATGGAGATCGCAGGGTGCGGTCTTCGCTAA CCGCGGTTCGCACCGCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MINAPYPAAAPYAAAEAPAAPYPVIYRNLMSVALLGTVYRVGSDADTISRAVEATLEDSSTYLLYRIIVLAMAGQRGKEH DQLLHHVETHPEDGVSKVALALTLLFNGDPAWRHWIDNVLATSVDQPVRQAAQGVLHFLGRATQKPVIH
Sequences:
>Translated_149_residues MINAPYPAAAPYAAAEAPAAPYPVIYRNLMSVALLGTVYRVGSDADTISRAVEATLEDSSTYLLYRIIVLAMAGQRGKEH DQLLHHVETHPEDGVSKVALALTLLFNGDPAWRHWIDNVLATSVDQPVRQAAQGVLHFLGRATQKPVIH >Mature_149_residues MINAPYPAAAPYAAAEAPAAPYPVIYRNLMSVALLGTVYRVGSDADTISRAVEATLEDSSTYLLYRIIVLAMAGQRGKEH DQLLHHVETHPEDGVSKVALALTLLFNGDPAWRHWIDNVLATSVDQPVRQAAQGVLHFLGRATQKPVIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16207; Mature: 16207
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINAPYPAAAPYAAAEAPAAPYPVIYRNLMSVALLGTVYRVGSDADTISRAVEATLEDSS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC TYLLYRIIVLAMAGQRGKEHDQLLHHVETHPEDGVSKVALALTLLFNGDPAWRHWIDNVL HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH ATSVDQPVRQAAQGVLHFLGRATQKPVIH HHCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MINAPYPAAAPYAAAEAPAAPYPVIYRNLMSVALLGTVYRVGSDADTISRAVEATLEDSS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC TYLLYRIIVLAMAGQRGKEHDQLLHHVETHPEDGVSKVALALTLLFNGDPAWRHWIDNVL HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH ATSVDQPVRQAAQGVLHFLGRATQKPVIH HHCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA