| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609175
Identifier: 120609175
GI number: 120609175
Start: 507400
End: 507663
Strand: Reverse
Name: 120609175
Synonym: Aave_0472
Alternate gene names: NA
Gene position: 507663-507400 (Counterclockwise)
Preceding gene: 120609176
Following gene: 120609174
Centisome position: 9.48
GC content: 62.5
Gene sequence:
>264_bases ATGACCGCATCCATCGAATCCACCATTTTCAGCGATCTGGAGAACCTAGAGCAGGCCCTGAGCGAAGACCTCAGCGGAGA CCGCGCACGCGCCATGATCCGCTACTTCGACGAAGTCGCCCGCGAAAGCAGTGCGATGCGGATCCAGGCGGAGATCGACG CCGAGCGCCAGTTGATCGGCCAGCTGGTCGATGCGTTCCAGGTCTCGCAGCGCGTGATCCGCAAGATCTGGGAAACCCTG CACGGCACGACGCTGGCGGTCTGA
Upstream 100 bases:
>100_bases GACGGGGTGAAGCACCTTTCGCTCACGTCCGGTGCGCGGATCGCTTCGGCCGACCAGCCGGCGTCCTTCCGATAACACAC CCAAGAGACCTTTTCAGACC
Downstream 100 bases:
>100_bases GGAAGGCACGACCATGATCAACGCCCCCTACCCCGCCGCTGCTCCGTACGCCGCCGCCGAAGCGCCGGCCGCGCCCTACC CGGTGATCTACCGCAACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MTASIESTIFSDLENLEQALSEDLSGDRARAMIRYFDEVARESSAMRIQAEIDAERQLIGQLVDAFQVSQRVIRKIWETL HGTTLAV
Sequences:
>Translated_87_residues MTASIESTIFSDLENLEQALSEDLSGDRARAMIRYFDEVARESSAMRIQAEIDAERQLIGQLVDAFQVSQRVIRKIWETL HGTTLAV >Mature_86_residues TASIESTIFSDLENLEQALSEDLSGDRARAMIRYFDEVARESSAMRIQAEIDAERQLIGQLVDAFQVSQRVIRKIWETLH GTTLAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9843; Mature: 9712
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASIESTIFSDLENLEQALSEDLSGDRARAMIRYFDEVARESSAMRIQAEIDAERQLIG CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLVDAFQVSQRVIRKIWETLHGTTLAV HHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TASIESTIFSDLENLEQALSEDLSGDRARAMIRYFDEVARESSAMRIQAEIDAERQLIG CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLVDAFQVSQRVIRKIWETLHGTTLAV HHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA