| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609149
Identifier: 120609149
GI number: 120609149
Start: 483843
End: 484298
Strand: Reverse
Name: 120609149
Synonym: Aave_0446
Alternate gene names: NA
Gene position: 484298-483843 (Counterclockwise)
Preceding gene: 120609150
Following gene: 120609147
Centisome position: 9.05
GC content: 64.25
Gene sequence:
>456_bases ATGAGCTTCCAGCAGTACGAACAACTCGTCACCGACCTCTGCGGGGTCATCGACCTGCCCGACCCGCAGGCCGTGCTGGA CCGGGGCTGGGTGGAGGTGGAGGGCTTCGAGGTCCAGATAGCGCACTACGAGAACGACGTGGCAGCGATGTACCTCAACT TCCATTTCGGCATCGTCACGGCCGGCCGCACGCTGGCCGTCTACCGGCTCCTGCTGGAAGCCAACCTCACGGTCTATGCG CAGGACCAGGCGCAGGCCGGGATCAATCCGGACACCGGCGGCATCATCCTCATCGTGCGCGTGCCGATGACGCCCGACAT CACGGGCACCTGGCTGGCCGAAACGCTCACGCACTATGCAGAGCACGGCCGCTACTGGGGCGACAACATCCTGACCTCCA CCGACGAGGCCTTTCTGGGAATCTGCTCCGGCGACTACCTGTGGATCAAGGTGTGA
Upstream 100 bases:
>100_bases TCAACTACAGCCGGCCCCGGACCACGTCCCAGCTCCGGCTGACCACGGAGCGGCTGGCGGGCGGTCCGGCATGGCTTCTG CCGCGCATGCCCGAACGATC
Downstream 100 bases:
>100_bases GCCTTTGAAGAGCCTGCAGCCCCAGGGGCTCGCGCCCCGGCGCCGCGGTGCCCCGCAGGGTCTCAACTGCCCAGGGGCGG CATGGAATGCATGGCGGGAA
Product: TIR chaperone family protein
Products: NA
Alternate protein names: Glutamine Synthetase; HpaB Protein; Type III Secretion Protein HpaB; Tir Chaperone Family Protein
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSFQQYEQLVTDLCGVIDLPDPQAVLDRGWVEVEGFEVQIAHYENDVAAMYLNFHFGIVTAGRTLAVYRLLLEANLTVYA QDQAQAGINPDTGGIILIVRVPMTPDITGTWLAETLTHYAEHGRYWGDNILTSTDEAFLGICSGDYLWIKV
Sequences:
>Translated_151_residues MSFQQYEQLVTDLCGVIDLPDPQAVLDRGWVEVEGFEVQIAHYENDVAAMYLNFHFGIVTAGRTLAVYRLLLEANLTVYA QDQAQAGINPDTGGIILIVRVPMTPDITGTWLAETLTHYAEHGRYWGDNILTSTDEAFLGICSGDYLWIKV >Mature_150_residues SFQQYEQLVTDLCGVIDLPDPQAVLDRGWVEVEGFEVQIAHYENDVAAMYLNFHFGIVTAGRTLAVYRLLLEANLTVYAQ DQAQAGINPDTGGIILIVRVPMTPDITGTWLAETLTHYAEHGRYWGDNILTSTDEAFLGICSGDYLWIKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16855; Mature: 16724
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQQYEQLVTDLCGVIDLPDPQAVLDRGWVEVEGFEVQIAHYENDVAAMYLNFHFGIVT CCHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEECEEEEEEEECCCEEEEEEEEEEEEEE AGRTLAVYRLLLEANLTVYAQDQAQAGINPDTGGIILIVRVPMTPDITGTWLAETLTHYA CCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH EHGRYWGDNILTSTDEAFLGICSGDYLWIKV HCCCCCCCCCCCCCCCCEEEEECCCEEEEEC >Mature Secondary Structure SFQQYEQLVTDLCGVIDLPDPQAVLDRGWVEVEGFEVQIAHYENDVAAMYLNFHFGIVT CHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEECEEEEEEEECCCEEEEEEEEEEEEEE AGRTLAVYRLLLEANLTVYAQDQAQAGINPDTGGIILIVRVPMTPDITGTWLAETLTHYA CCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH EHGRYWGDNILTSTDEAFLGICSGDYLWIKV HCCCCCCCCCCCCCCCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA