| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609150
Identifier: 120609150
GI number: 120609150
Start: 484295
End: 485269
Strand: Reverse
Name: 120609150
Synonym: Aave_0447
Alternate gene names: NA
Gene position: 485269-484295 (Counterclockwise)
Preceding gene: 120609151
Following gene: 120609149
Centisome position: 9.07
GC content: 70.26
Gene sequence:
>975_bases ATGATGCTGAACCTGTTCTCGGTATTCCGCCTCAAGCAGCAGCGCAACCGCCAGCAGCTGCAGCAGCAGCTCATCAAGCG CGAGAACCTGCGCGAGCAGCTGCATGAAGAGGACGTGCACAAGCGGCAGCGTGCCGTGCTGCAGGGCCGATACGGCGATT ACGTCTTCAAGACGCTGGGGCGCCCTCCGCCGCCTCCACCGCCCCGGCAGAGCCACCTGCCCGGCCAGGGCAGCGAACAC GCGCCCGACGGGGAGCGCACGGTGCTGGACTTCCAGGCGGACTTCGAGCAGGCCAGCGAAACCGGCGAAGCCGTGCGCAG CGAGCGCAAGGGCCAGGATGAGGAAGGCAGCCGGGAGGCGCACGAGCACGGCATGGAAGGCGTCGCCGAGCACCGGCGCG ACCTGGAAGAACTGGAGCAGTACTCGCAGGACATCTTCCTGCAGCCGGGCAGCGGCACGGCACAGCAGGACGGGCGCGAA AGCGGATCCGGCACCGGCGGGCAGTCCGGCGGCAGCCACCAGGGCGGCGAAGGCCGGGGCCATGGCGGTCAGTCGCAGGC CGGCGGCAGCGCGGCGAAGCTGCGCATGCAGGCCATGCTGGCGGACTTCGAGGTGGGAATGTCCAGCGAAGATCCCGTGG TGCAGGCCGATACGCTGGTGGCCGCGCTCGGATCGATCGTCTGGGCATCGCACGGGAATGGCCATCCCGCGCAGGCCATG CTGCTGGCGCGGATCGCAGAGCACCTGCGCCGCCAGAACGGAGGCAAGCCGCTCGCGACGGTCGCGGAAGTCCGGGAAGC GCTGCTGCGCGCCGGCCTGGATGTCGCGGGCAAACCGTCCGACCGCTTCGCGCTGCTGCCCCTGCAGCTCCTCAACTACA GCCGGCCCCGGACCACGTCCCAGCTCCGGCTGACCACGGAGCGGCTGGCGGGCGGTCCGGCATGGCTTCTGCCGCGCATG CCCGAACGATCATGA
Upstream 100 bases:
>100_bases AGCTGATCTGCGTGACGGTCACCGTCGCTGTGAGCGCGCCCTGGGTGGGCAGCACCGTGCTGCAGTTCTCGCAGCGGCTT CTCACGGCCGTCTTTTCGCC
Downstream 100 bases:
>100_bases GCTTCCAGCAGTACGAACAACTCGTCACCGACCTCTGCGGGGTCATCGACCTGCCCGACCCGCAGGCCGTGCTGGACCGG GGCTGGGTGGAGGTGGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MMLNLFSVFRLKQQRNRQQLQQQLIKRENLREQLHEEDVHKRQRAVLQGRYGDYVFKTLGRPPPPPPPRQSHLPGQGSEH APDGERTVLDFQADFEQASETGEAVRSERKGQDEEGSREAHEHGMEGVAEHRRDLEELEQYSQDIFLQPGSGTAQQDGRE SGSGTGGQSGGSHQGGEGRGHGGQSQAGGSAAKLRMQAMLADFEVGMSSEDPVVQADTLVAALGSIVWASHGNGHPAQAM LLARIAEHLRRQNGGKPLATVAEVREALLRAGLDVAGKPSDRFALLPLQLLNYSRPRTTSQLRLTTERLAGGPAWLLPRM PERS
Sequences:
>Translated_324_residues MMLNLFSVFRLKQQRNRQQLQQQLIKRENLREQLHEEDVHKRQRAVLQGRYGDYVFKTLGRPPPPPPPRQSHLPGQGSEH APDGERTVLDFQADFEQASETGEAVRSERKGQDEEGSREAHEHGMEGVAEHRRDLEELEQYSQDIFLQPGSGTAQQDGRE SGSGTGGQSGGSHQGGEGRGHGGQSQAGGSAAKLRMQAMLADFEVGMSSEDPVVQADTLVAALGSIVWASHGNGHPAQAM LLARIAEHLRRQNGGKPLATVAEVREALLRAGLDVAGKPSDRFALLPLQLLNYSRPRTTSQLRLTTERLAGGPAWLLPRM PERS >Mature_324_residues MMLNLFSVFRLKQQRNRQQLQQQLIKRENLREQLHEEDVHKRQRAVLQGRYGDYVFKTLGRPPPPPPPRQSHLPGQGSEH APDGERTVLDFQADFEQASETGEAVRSERKGQDEEGSREAHEHGMEGVAEHRRDLEELEQYSQDIFLQPGSGTAQQDGRE SGSGTGGQSGGSHQGGEGRGHGGQSQAGGSAAKLRMQAMLADFEVGMSSEDPVVQADTLVAALGSIVWASHGNGHPAQAM LLARIAEHLRRQNGGKPLATVAEVREALLRAGLDVAGKPSDRFALLPLQLLNYSRPRTTSQLRLTTERLAGGPAWLLPRM PERS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35541; Mature: 35541
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLNLFSVFRLKQQRNRQQLQQQLIKRENLREQLHEEDVHKRQRAVLQGRYGDYVFKTLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC RPPPPPPPRQSHLPGQGSEHAPDGERTVLDFQADFEQASETGEAVRSERKGQDEEGSREA CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH HEHGMEGVAEHRRDLEELEQYSQDIFLQPGSGTAQQDGRESGSGTGGQSGGSHQGGEGRG HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC HGGQSQAGGSAAKLRMQAMLADFEVGMSSEDPVVQADTLVAALGSIVWASHGNGHPAQAM CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH LLARIAEHLRRQNGGKPLATVAEVREALLRAGLDVAGKPSDRFALLPLQLLNYSRPRTTS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHCCCCCCCCH QLRLTTERLAGGPAWLLPRMPERS HHHHHHHHHCCCCCEECCCCCCCC >Mature Secondary Structure MMLNLFSVFRLKQQRNRQQLQQQLIKRENLREQLHEEDVHKRQRAVLQGRYGDYVFKTLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC RPPPPPPPRQSHLPGQGSEHAPDGERTVLDFQADFEQASETGEAVRSERKGQDEEGSREA CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH HEHGMEGVAEHRRDLEELEQYSQDIFLQPGSGTAQQDGRESGSGTGGQSGGSHQGGEGRG HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC HGGQSQAGGSAAKLRMQAMLADFEVGMSSEDPVVQADTLVAALGSIVWASHGNGHPAQAM CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH LLARIAEHLRRQNGGKPLATVAEVREALLRAGLDVAGKPSDRFALLPLQLLNYSRPRTTS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHCCCCCCCCH QLRLTTERLAGGPAWLLPRMPERS HHHHHHHHHCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA