| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is glnP [H]
Identifier: 120608917
GI number: 120608917
Start: 232981
End: 233667
Strand: Reverse
Name: glnP [H]
Synonym: Aave_0210
Alternate gene names: 120608917
Gene position: 233667-232981 (Counterclockwise)
Preceding gene: 120608918
Following gene: 120608916
Centisome position: 4.37
GC content: 69.43
Gene sequence:
>687_bases ATGGCATATGCATTCGACTTCGGCGCCGTCTTCGACTACAGCGGCCAGCTGGCGCAGGGCGCCGCCTTCACGCTGGGGCT GACGGCGGCCGGTGCCGTGCTGGGCGGCGCGATCGGCGTGGCCGGCGGCGTCTGCCGCGCCTGGCGCATCGCGCCGCTGA ACTGGCTGTTCAAGCTGTATGTGGAGGCCATCCGCAACACGCCCTTCCTGGTGCAGCTGATGTTCGTGTTCTTCGGCCTG CCGTCGCTGGGCCTGCAGCTCAATGAATGGCAGGCCTGCCTGCTGACCACCGTGGTCAACCTGGGCGCCTACCTCACGGA GATCGTGCGGGCCGGCATCCAGGAAACGCCGCGCGGCCAGCTGGAGGCCGCGAGCGCGCTGGGCATGGGCCGCTGGGCCT GCTTCCGGCACGTGGTGCTGCGGCCCGCGCTGCAGAAGGTGTGGCCCGCGCTCAGCAGCCAGATCGTCATCGTGATGCTG GGCACATCGGTGGTGTCGCAGATCGCGGCGCAGGACCTGACCTTCGCCGCCAATTTCATCCAGTCGCGCAATTTCCGCGC GTTCGAGACCTACATCGTGGTGACGGCGCTCTACTTCGCGCTGGCCCTGCTGCTGCGCCAGGCGCTGGCCTGGATCGGGC AGCACGTCATCGTGGCGCGCCGCGCGCCGGCCGGAGACGCCGCATGA
Upstream 100 bases:
>100_bases TGTCGCAGCGCTGGATGAAGATGCCGCTGCCCGCCACGCTGTAAGCGGCCGGGACCGCACCGTCCGCACAGGGCCACGTT GACCGGAAGAGACCTCCTCC
Downstream 100 bases:
>100_bases TCGCCGACATTCCCCTGCTGCCCATCCTGCTCAAGCTGGCCGAAGGCCTTTGGGCCACCCTGCTGCTGTCGCTCATGGCT TTCGCGCTGGGCGGCGCGGC
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MAYAFDFGAVFDYSGQLAQGAAFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLYVEAIRNTPFLVQLMFVFFGL PSLGLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQLEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVML GTSVVSQIAAQDLTFAANFIQSRNFRAFETYIVVTALYFALALLLRQALAWIGQHVIVARRAPAGDAA
Sequences:
>Translated_228_residues MAYAFDFGAVFDYSGQLAQGAAFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLYVEAIRNTPFLVQLMFVFFGL PSLGLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQLEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVML GTSVVSQIAAQDLTFAANFIQSRNFRAFETYIVVTALYFALALLLRQALAWIGQHVIVARRAPAGDAA >Mature_227_residues AYAFDFGAVFDYSGQLAQGAAFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLYVEAIRNTPFLVQLMFVFFGLP SLGLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQLEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVMLG TSVVSQIAAQDLTFAANFIQSRNFRAFETYIVVTALYFALALLLRQALAWIGQHVIVARRAPAGDAA
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=33.9901477832512, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1788226, Length=196, Percent_Identity=31.1224489795918, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=30, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788646, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787087, Length=238, Percent_Identity=24.7899159663866, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=26.7281105990783, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1787086, Length=219, Percent_Identity=25.1141552511416, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1786874, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI48994930, Length=134, Percent_Identity=28.3582089552239, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24596; Mature: 24465
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYAFDFGAVFDYSGQLAQGAAFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLY CCEEECCCHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEAIRNTPFLVQLMFVFFGLPSLGLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQ HHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH LEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQDLTFAANFI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHH QSRNFRAFETYIVVTALYFALALLLRQALAWIGQHVIVARRAPAGDAA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC >Mature Secondary Structure AYAFDFGAVFDYSGQLAQGAAFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLY CEEECCCHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEAIRNTPFLVQLMFVFFGLPSLGLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQ HHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH LEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQDLTFAANFI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHH QSRNFRAFETYIVVTALYFALALLLRQALAWIGQHVIVARRAPAGDAA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]