| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608905
Identifier: 120608905
GI number: 120608905
Start: 222166
End: 222681
Strand: Reverse
Name: 120608905
Synonym: Aave_0197
Alternate gene names: NA
Gene position: 222681-222166 (Counterclockwise)
Preceding gene: 120608906
Following gene: 120608903
Centisome position: 4.16
GC content: 67.44
Gene sequence:
>516_bases ATGAACGACTCCCCCATGCAGAAGACCGCAGAGGCATCTCCCGATACCTCCGAAGCGCCCATCCAGGAAGCGCGCCTGTG GAGCGACGGACGCTGGACGGCCGAGGTGATCAAGAACGAAGACGACGACGGCTGGGCCGTGTCCATGACGCTGCGCGGCG AATCGGAGCCGGCGCTGGTGGGCCCGTGGACGATGGGCCGCGACAAGAAGAACCCCAAGCCGCTGGACGTGACCGCCTTC CACACGCTGGTCAAGACCGCCTCCGAAGTGCTGCGCCGCCACGAGCAGCAGTTGCATGCGCAGCTGCACAAGGAGGTGAC CGTGGGTTCCGGCGCGGACCTCGTCCGGGTGGCGCTGCGCATCGTGCCGGACGAGGAATATCCGTACGCGATGCTGACGG CGCATGACGCTTCCGGCCAGCTGCTGGGCGAGGCGCGCGTGGAGGCGAACTTCAAGCTCAGCCAGGGCAGCGCGCTGGCG TGGGTCGAGAGCGATTATTCGTCGAGCGGGCGCTGA
Upstream 100 bases:
>100_bases GCAGCGCGGCAGCGCGGGAGTTCGTGGCGCGGCTGCGGCCCATCGTGGGCGCCACGGCCACCGCTGCCCGCCGTCCGGCA GCGTGCCGGACAATGCGGTG
Downstream 100 bases:
>100_bases CGGCACCGATGCCCCAGGGTGGCAGGGCGGGCCGTAGCTGCCGGCATCGGAGTTGCGCGCTGGTCAAGAGTCCCGGGCAG CCCCTTCCGCGAATGTCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNDSPMQKTAEASPDTSEAPIQEARLWSDGRWTAEVIKNEDDDGWAVSMTLRGESEPALVGPWTMGRDKKNPKPLDVTAF HTLVKTASEVLRRHEQQLHAQLHKEVTVGSGADLVRVALRIVPDEEYPYAMLTAHDASGQLLGEARVEANFKLSQGSALA WVESDYSSSGR
Sequences:
>Translated_171_residues MNDSPMQKTAEASPDTSEAPIQEARLWSDGRWTAEVIKNEDDDGWAVSMTLRGESEPALVGPWTMGRDKKNPKPLDVTAF HTLVKTASEVLRRHEQQLHAQLHKEVTVGSGADLVRVALRIVPDEEYPYAMLTAHDASGQLLGEARVEANFKLSQGSALA WVESDYSSSGR >Mature_171_residues MNDSPMQKTAEASPDTSEAPIQEARLWSDGRWTAEVIKNEDDDGWAVSMTLRGESEPALVGPWTMGRDKKNPKPLDVTAF HTLVKTASEVLRRHEQQLHAQLHKEVTVGSGADLVRVALRIVPDEEYPYAMLTAHDASGQLLGEARVEANFKLSQGSALA WVESDYSSSGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18828; Mature: 18828
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDSPMQKTAEASPDTSEAPIQEARLWSDGRWTAEVIKNEDDDGWAVSMTLRGESEPALV CCCCCCCHHCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEE GPWTMGRDKKNPKPLDVTAFHTLVKTASEVLRRHEQQLHAQLHKEVTVGSGADLVRVALR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IVPDEEYPYAMLTAHDASGQLLGEARVEANFKLSQGSALAWVESDYSSSGR HCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCC >Mature Secondary Structure MNDSPMQKTAEASPDTSEAPIQEARLWSDGRWTAEVIKNEDDDGWAVSMTLRGESEPALV CCCCCCCHHCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEE GPWTMGRDKKNPKPLDVTAFHTLVKTASEVLRRHEQQLHAQLHKEVTVGSGADLVRVALR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IVPDEEYPYAMLTAHDASGQLLGEARVEANFKLSQGSALAWVESDYSSSGR HCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA