| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120608890
Identifier: 120608890
GI number: 120608890
Start: 203708
End: 204691
Strand: Reverse
Name: 120608890
Synonym: Aave_0182
Alternate gene names: NA
Gene position: 204691-203708 (Counterclockwise)
Preceding gene: 120608891
Following gene: 120608888
Centisome position: 3.82
GC content: 69.11
Gene sequence:
>984_bases GTGGAGAAGCTCGAACGCGAAACGCCCGGCCAGTTCGGCCTGTACGTGAAACGCCTGGACAACGGCGAGACCTTCGCGTG GCAGGCGGACCGGCGCTGGTACCTGGCATCGTCCGCGAAGCTGCCCCTGGCCATCGCGGTGCTGCAGGAGGTGCAGCAGG GCCGCCTGCGCCTGGACCAGGAACTGCGCGTGGAAGAGCGCGACAAGATCGACGGCTCGGGTGCGCTGGTCTGGCAGCCC GTGGGCACGCAGCACAGCGTGGAGACGCTGCTGCGCCGCATGCTGATGGACAGCGACAACACCGCGGCGAACCTGCTGAT CCGCACCATCGGGCCGGACACGTTCAATACACGCGCCCGGGCGCTGATGGGCGCGCGCAACGTGGGGCCGCTCACCAACT TCACCCAGGTGCGCCAGGATGTGTACGCGGAGCTGCATCCCCGCGCGCGAGAGATCGCGCCGATGGAACTGGTGCGCGTG GCCGCGGCCCCCATGGGCTCGCAGCGCGTGCAGGCTTTGGCCCGCACGCTGCAGGTCCAGAAGGATGACCTGAAGGTGAA GACGATGGAAGAGGCCTACGACCGCTACTACGCGTGGGGCACCAACACCGCCACCCTGGCGGGCTACGGCGGCATGCTGG AAAAGCTGGTGCGCGGCCAGTTGCTGACGCCGCCGCACCAGCAGATGCTCTACAAGGACCTGAAGTTCGACACCTATGAC GCCTACCGGCTGGAAGCCGGGCTGCCGCGCACCGTGCGCTTCATCCACAAGACCGGCACGCAGTACCACCGCGCCTGCCA CATGGGTGTGATCGATCCGCAGGACGGGGGCGCGCAGGCGATCGTAGTGGCTACCTGCGCCGAGGACATGGACGAGATGC GCCAGGCGGGCCGCCTGTTCGAGCAGCTCGGGCGCGCGATCACCCGCACGCTGCTGAAGGACCGCCCGGCCACCGGTCCG GGCGCGGCGCAGGCCAGCGGCTGA
Upstream 100 bases:
>100_bases GCTGGCGGCGGTGCTGCCCCTGCTGCTGGCGGCGCTGGGGACGACGACGCCTGAGCGGGCGCTGGCCGCGCCCGCATGGG CCGAGGCCCTGAGGAGCCAG
Downstream 100 bases:
>100_bases CGCCGGCGCGCAGCGCGCGGTGCGGCGTCAGGACACCGCGGCGCCCTGGCGGCACACGCGCAGCACGTCCTCGCCGTAGG CTTCCAGCTTCTTGGCGCCC
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase Protein; Beta-Lactamase Class A
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MEKLERETPGQFGLYVKRLDNGETFAWQADRRWYLASSAKLPLAIAVLQEVQQGRLRLDQELRVEERDKIDGSGALVWQP VGTQHSVETLLRRMLMDSDNTAANLLIRTIGPDTFNTRARALMGARNVGPLTNFTQVRQDVYAELHPRAREIAPMELVRV AAAPMGSQRVQALARTLQVQKDDLKVKTMEEAYDRYYAWGTNTATLAGYGGMLEKLVRGQLLTPPHQQMLYKDLKFDTYD AYRLEAGLPRTVRFIHKTGTQYHRACHMGVIDPQDGGAQAIVVATCAEDMDEMRQAGRLFEQLGRAITRTLLKDRPATGP GAAQASG
Sequences:
>Translated_327_residues MEKLERETPGQFGLYVKRLDNGETFAWQADRRWYLASSAKLPLAIAVLQEVQQGRLRLDQELRVEERDKIDGSGALVWQP VGTQHSVETLLRRMLMDSDNTAANLLIRTIGPDTFNTRARALMGARNVGPLTNFTQVRQDVYAELHPRAREIAPMELVRV AAAPMGSQRVQALARTLQVQKDDLKVKTMEEAYDRYYAWGTNTATLAGYGGMLEKLVRGQLLTPPHQQMLYKDLKFDTYD AYRLEAGLPRTVRFIHKTGTQYHRACHMGVIDPQDGGAQAIVVATCAEDMDEMRQAGRLFEQLGRAITRTLLKDRPATGP GAAQASG >Mature_327_residues MEKLERETPGQFGLYVKRLDNGETFAWQADRRWYLASSAKLPLAIAVLQEVQQGRLRLDQELRVEERDKIDGSGALVWQP VGTQHSVETLLRRMLMDSDNTAANLLIRTIGPDTFNTRARALMGARNVGPLTNFTQVRQDVYAELHPRAREIAPMELVRV AAAPMGSQRVQALARTLQVQKDDLKVKTMEEAYDRYYAWGTNTATLAGYGGMLEKLVRGQLLTPPHQQMLYKDLKFDTYD AYRLEAGLPRTVRFIHKTGTQYHRACHMGVIDPQDGGAQAIVVATCAEDMDEMRQAGRLFEQLGRAITRTLLKDRPATGP GAAQASG
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36656; Mature: 36656
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLERETPGQFGLYVKRLDNGETFAWQADRRWYLASSAKLPLAIAVLQEVQQGRLRLDQ CCCCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCCH ELRVEERDKIDGSGALVWQPVGTQHSVETLLRRMLMDSDNTAANLLIRTIGPDTFNTRAR HCCCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCHHHH ALMGARNVGPLTNFTQVRQDVYAELHPRAREIAPMELVRVAAAPMGSQRVQALARTLQVQ HHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH KDDLKVKTMEEAYDRYYAWGTNTATLAGYGGMLEKLVRGQLLTPPHQQMLYKDLKFDTYD HCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC AYRLEAGLPRTVRFIHKTGTQYHRACHMGVIDPQDGGAQAIVVATCAEDMDEMRQAGRLF CEEECCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH EQLGRAITRTLLKDRPATGPGAAQASG HHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MEKLERETPGQFGLYVKRLDNGETFAWQADRRWYLASSAKLPLAIAVLQEVQQGRLRLDQ CCCCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCCH ELRVEERDKIDGSGALVWQPVGTQHSVETLLRRMLMDSDNTAANLLIRTIGPDTFNTRAR HCCCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCHHHH ALMGARNVGPLTNFTQVRQDVYAELHPRAREIAPMELVRVAAAPMGSQRVQALARTLQVQ HHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH KDDLKVKTMEEAYDRYYAWGTNTATLAGYGGMLEKLVRGQLLTPPHQQMLYKDLKFDTYD HCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC AYRLEAGLPRTVRFIHKTGTQYHRACHMGVIDPQDGGAQAIVVATCAEDMDEMRQAGRLF CEEECCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH EQLGRAITRTLLKDRPATGPGAAQASG HHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA