| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608891
Identifier: 120608891
GI number: 120608891
Start: 204738
End: 206048
Strand: Reverse
Name: 120608891
Synonym: Aave_0183
Alternate gene names: NA
Gene position: 206048-204738 (Counterclockwise)
Preceding gene: 120608896
Following gene: 120608890
Centisome position: 3.85
GC content: 74.37
Gene sequence:
>1311_bases ATGCCCCAGCTACCCGCAACCACGCACCTTCGCTTCCGCCCGTATCGCCCCCTTCGCCCGCTCCGGCTCCTGGCCTGCGC CACGTCCGCGCTGTGGCACATCGCCACGGGCACGGCGCATGCCCAGGCCGCGGATGCACCGCCCGCCGCGCTGCCGGCTC CCGCCTCCGCGCCGGCCTGGGTGCAGCCGCTGGAGCGCGCGCTGGCGCGGGCGGAGGCGGACAGCGGCGTGCGCATCGGC GTCCATGTACGCGATCTGGAGACGGGCGCCTCCGCATCGCTGCATGGCACGGAGCCGTGGTACCTGGCCTCGTCCATCAA GGTGCCGGTGGCGATCGCGGTGCTGCGCGGGGCGGAGCGCGGCGACTTCACGCTGGACACGCCCCTCACCCTGCGCGCCG CCGACTACGTGGACGGCGCGGGCCCCACCAACGGACGCCCCGTGGGCACGCCCCTCACCGTGCGCTACCTGCTGGAGCAG ATGATCATCTACAGCGACAACACCGCCAGCGACATGCTCATCGGCCTGGTCGGCATCGGCACGGTGAACGCGGTGGTGCA GTCGCTGGTGCCCCGGGGCTTCGGGCGCATCACCACGCTGGCCGACGTGCGCCGCCACGTGTACGGCGTGCTCACGCCCG CGGCATCGCACCTGTCCGGCACCGACTTCCTGGCGCTGCGGCAGCAGCAGCGGCTGCATGGCGACGCCGCGGCACGGTCC GCGCTGGCGACGCTGCTGCGCGTGCCCGAGCGCTCCCTCGCGCCCGCCGACCTGGCTTCCGCCTACGAGAGCTACTACGC CACGGGCCTCAACAGCGGCCGGCTCGACGCCTACGCCGACCTGCTGCAGGCACTCGTCGAGGGCCGCGCGCTCGATGCCC GGCACACGGCCTACCTGCTGTCCGTGATGGAGCGCGTGAAAACCGGCCCCCAGCGCATCAAGGCGGGACTACCGCCGGGT GCGCGCTTCGCCCACAAGACCGGCACGCAGCGCGCACGAACATGCGATTCAGGCTTGGTCACCGTGCCGCGCGCCCTTCC GGAGCGGCGGGTGCTGGTGGTGGCCTGCACGCGCGGCGAACCTTCCACGGCCCGGTCCGATCGCGCGCTCCGGCAGGTGG GCATCGCCCTTTGCCAGTCGGGCCTGCTGTCCGACGGGAGATCGCATGAACCACGCTGCCCCACCCTGCCCCCCCGGGCT TCCGGCGCCACGGCCGCGCCCGCAGGCGGCGAGGCGCCGGCGGCTCGCCCGCACGGTGCTGGCGGCGGTGCTGCCCCTGC TGCTGGCGGCGCTGGGGACGACGACGCCTGA
Upstream 100 bases:
>100_bases GCCCCGCGCCGCCCTGCGGGCCGCAAGGGACATTGCCCTACGGCGCCGCGCGCGCGCCGGCGCTAGGGTGGACCTTCGCG CCCGTTCCGAGACCGTCCGC
Downstream 100 bases:
>100_bases GCGGGCGCTGGCCGCGCCCGCATGGGCCGAGGCCCTGAGGAGCCAGGTGGAGAAGCTCGAACGCGAAACGCCCGGCCAGT TCGGCCTGTACGTGAAACGC
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase Class A
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MPQLPATTHLRFRPYRPLRPLRLLACATSALWHIATGTAHAQAADAPPAALPAPASAPAWVQPLERALARAEADSGVRIG VHVRDLETGASASLHGTEPWYLASSIKVPVAIAVLRGAERGDFTLDTPLTLRAADYVDGAGPTNGRPVGTPLTVRYLLEQ MIIYSDNTASDMLIGLVGIGTVNAVVQSLVPRGFGRITTLADVRRHVYGVLTPAASHLSGTDFLALRQQQRLHGDAAARS ALATLLRVPERSLAPADLASAYESYYATGLNSGRLDAYADLLQALVEGRALDARHTAYLLSVMERVKTGPQRIKAGLPPG ARFAHKTGTQRARTCDSGLVTVPRALPERRVLVVACTRGEPSTARSDRALRQVGIALCQSGLLSDGRSHEPRCPTLPPRA SGATAAPAGGEAPAARPHGAGGGAAPAAGGAGDDDA
Sequences:
>Translated_436_residues MPQLPATTHLRFRPYRPLRPLRLLACATSALWHIATGTAHAQAADAPPAALPAPASAPAWVQPLERALARAEADSGVRIG VHVRDLETGASASLHGTEPWYLASSIKVPVAIAVLRGAERGDFTLDTPLTLRAADYVDGAGPTNGRPVGTPLTVRYLLEQ MIIYSDNTASDMLIGLVGIGTVNAVVQSLVPRGFGRITTLADVRRHVYGVLTPAASHLSGTDFLALRQQQRLHGDAAARS ALATLLRVPERSLAPADLASAYESYYATGLNSGRLDAYADLLQALVEGRALDARHTAYLLSVMERVKTGPQRIKAGLPPG ARFAHKTGTQRARTCDSGLVTVPRALPERRVLVVACTRGEPSTARSDRALRQVGIALCQSGLLSDGRSHEPRCPTLPPRA SGATAAPAGGEAPAARPHGAGGGAAPAAGGAGDDDA >Mature_435_residues PQLPATTHLRFRPYRPLRPLRLLACATSALWHIATGTAHAQAADAPPAALPAPASAPAWVQPLERALARAEADSGVRIGV HVRDLETGASASLHGTEPWYLASSIKVPVAIAVLRGAERGDFTLDTPLTLRAADYVDGAGPTNGRPVGTPLTVRYLLEQM IIYSDNTASDMLIGLVGIGTVNAVVQSLVPRGFGRITTLADVRRHVYGVLTPAASHLSGTDFLALRQQQRLHGDAAARSA LATLLRVPERSLAPADLASAYESYYATGLNSGRLDAYADLLQALVEGRALDARHTAYLLSVMERVKTGPQRIKAGLPPGA RFAHKTGTQRARTCDSGLVTVPRALPERRVLVVACTRGEPSTARSDRALRQVGIALCQSGLLSDGRSHEPRCPTLPPRAS GATAAPAGGEAPAARPHGAGGGAAPAAGGAGDDDA
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45500; Mature: 45369
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLPATTHLRFRPYRPLRPLRLLACATSALWHIATGTAHAQAADAPPAALPAPASAPAW CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH VQPLERALARAEADSGVRIGVHVRDLETGASASLHGTEPWYLASSIKVPVAIAVLRGAER HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCC GDFTLDTPLTLRAADYVDGAGPTNGRPVGTPLTVRYLLEQMIIYSDNTASDMLIGLVGIG CCEEECCCEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TVNAVVQSLVPRGFGRITTLADVRRHVYGVLTPAASHLSGTDFLALRQQQRLHGDAAARS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALATLLRVPERSLAPADLASAYESYYATGLNSGRLDAYADLLQALVEGRALDARHTAYLL HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH SVMERVKTGPQRIKAGLPPGARFAHKTGTQRARTCDSGLVTVPRALPERRVLVVACTRGE HHHHHHHCCHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCEECCCCCCCCEEEEEEECCCC PSTARSDRALRQVGIALCQSGLLSDGRSHEPRCPTLPPRASGATAAPAGGEAPAARPHGA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGAAPAAGGAGDDDA CCCCCCCCCCCCCCCC >Mature Secondary Structure PQLPATTHLRFRPYRPLRPLRLLACATSALWHIATGTAHAQAADAPPAALPAPASAPAW CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH VQPLERALARAEADSGVRIGVHVRDLETGASASLHGTEPWYLASSIKVPVAIAVLRGAER HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCC GDFTLDTPLTLRAADYVDGAGPTNGRPVGTPLTVRYLLEQMIIYSDNTASDMLIGLVGIG CCEEECCCEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TVNAVVQSLVPRGFGRITTLADVRRHVYGVLTPAASHLSGTDFLALRQQQRLHGDAAARS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALATLLRVPERSLAPADLASAYESYYATGLNSGRLDAYADLLQALVEGRALDARHTAYLL HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH SVMERVKTGPQRIKAGLPPGARFAHKTGTQRARTCDSGLVTVPRALPERRVLVVACTRGE HHHHHHHCCHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCEECCCCCCCCEEEEEEECCCC PSTARSDRALRQVGIALCQSGLLSDGRSHEPRCPTLPPRASGATAAPAGGEAPAARPHGA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGAAPAAGGAGDDDA CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA