Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120599322

Identifier: 120599322

GI number: 120599322

Start: 2879405

End: 2879989

Strand: Direct

Name: 120599322

Synonym: Sputw3181_2518

Alternate gene names: NA

Gene position: 2879405-2879989 (Clockwise)

Preceding gene: 120599321

Following gene: 120599323

Centisome position: 61.15

GC content: 45.47

Gene sequence:

>585_bases
ATGAGCCAACAAATCGAAATCCCTGCATTCTTGCTTGAAATGTCACAGCAAATGCACCAGCAGGATAACCGCTGCACCGC
CGAACCTATCTGGCAAGTTCGCTGCAAGCGCTATTTGCCTACCGAAGAAGGCTATGACGAACATCACTGGGAGATTGTTG
ATACCGATGGCGATGCCACCGCGCTATATCGCTCTGATAAATGCGATAAGCAAGCACTGGCCGAATGGTTAGCTGAAAAC
GACTTGGGATGGTGCGATCAATGGTTAGAAGCTATTGATGTAAGCGCTGACATTGATAATCTTGAGGCTTTTTCAGAAAT
CTTTATTGAATCATTTATCGACGACTTTAATGTTGAGTCAGATTACGACCAGCTACCTGATCCGCTTAAAAAGTTTCACC
TTCAAGAAACGGAAGAAGTTATTAAAACCTGTTTTACCGAAGCCGATGCACGGGCATTTATCGCCCGTAAGCAGCACGAC
TATCCAAAGCTTTACACCTATGTCGAATCAATGGTGTTTTGCCCGCAGATGATCCAATTACGCCATTGGATCATGTCACT
CACCACGCCAGAGGTGAAAGCATGA

Upstream 100 bases:

>100_bases
TTGGATGTTGCCAGGCGGCAAATTCACCACCAATCGCGCCGTTGCCATCCGTGCTGCCAAAGGCCTGCACCGTTTTCTGG
TTAAAAGATAAGGACGTCAC

Downstream 100 bases:

>100_bases
GCCAATTATTCTACCTGCGCGATTCGCGCACCAATGTCGGCAGCACTTGCCTTTTTTGGGCTAAAGATGGTTGCGGCTAC
ACCAGCGACTTAAACAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSQQIEIPAFLLEMSQQMHQQDNRCTAEPIWQVRCKRYLPTEEGYDEHHWEIVDTDGDATALYRSDKCDKQALAEWLAEN
DLGWCDQWLEAIDVSADIDNLEAFSEIFIESFIDDFNVESDYDQLPDPLKKFHLQETEEVIKTCFTEADARAFIARKQHD
YPKLYTYVESMVFCPQMIQLRHWIMSLTTPEVKA

Sequences:

>Translated_194_residues
MSQQIEIPAFLLEMSQQMHQQDNRCTAEPIWQVRCKRYLPTEEGYDEHHWEIVDTDGDATALYRSDKCDKQALAEWLAEN
DLGWCDQWLEAIDVSADIDNLEAFSEIFIESFIDDFNVESDYDQLPDPLKKFHLQETEEVIKTCFTEADARAFIARKQHD
YPKLYTYVESMVFCPQMIQLRHWIMSLTTPEVKA
>Mature_193_residues
SQQIEIPAFLLEMSQQMHQQDNRCTAEPIWQVRCKRYLPTEEGYDEHHWEIVDTDGDATALYRSDKCDKQALAEWLAEND
LGWCDQWLEAIDVSADIDNLEAFSEIFIESFIDDFNVESDYDQLPDPLKKFHLQETEEVIKTCFTEADARAFIARKQHDY
PKLYTYVESMVFCPQMIQLRHWIMSLTTPEVKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22868; Mature: 22737

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQIEIPAFLLEMSQQMHQQDNRCTAEPIWQVRCKRYLPTEEGYDEHHWEIVDTDGDAT
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCH
ALYRSDKCDKQALAEWLAENDLGWCDQWLEAIDVSADIDNLEAFSEIFIESFIDDFNVES
HHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
DYDQLPDPLKKFHLQETEEVIKTCFTEADARAFIARKQHDYPKLYTYVESMVFCPQMIQL
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RHWIMSLTTPEVKA
HHHHHHHCCCCCCC
>Mature Secondary Structure 
SQQIEIPAFLLEMSQQMHQQDNRCTAEPIWQVRCKRYLPTEEGYDEHHWEIVDTDGDAT
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCH
ALYRSDKCDKQALAEWLAENDLGWCDQWLEAIDVSADIDNLEAFSEIFIESFIDDFNVES
HHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
DYDQLPDPLKKFHLQETEEVIKTCFTEADARAFIARKQHDYPKLYTYVESMVFCPQMIQL
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RHWIMSLTTPEVKA
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA