Click here to switch to the map view.

The map label for this gene is yccT [C]

Identifier: 120599216

GI number: 120599216

Start: 2784088

End: 2784843

Strand: Direct

Name: yccT [C]

Synonym: Sputw3181_2412

Alternate gene names: 120599216

Gene position: 2784088-2784843 (Clockwise)

Preceding gene: 120599215

Following gene: 120599226

Centisome position: 59.13

GC content: 42.99

Gene sequence:

>756_bases
ATGAAGTATCAATCAATCCTATGTACTACGGCGCTAATACTAACCACTGTGCAGCCAGCAACCGCCGAGATTACTTTGAA
CCTGCCTAAAAATGCTGAAGTGTTAACGGTCAATGGTAGGCCCGCAGTAAAGAGTGACTCTCTCATTTTAGCCGATGGTA
TTAATCAAATTGCCTTTCGCTATAGCGTGCAATATCGACAACAAGCTGAGACGGTACGCTATCAGTCTGATGTGCTTATT
GTCCGTTTTGATGCATCAACACAGATACTCACACTGAGACTTCCCGCCATCAACTCAGCCAGAGATGCAAAAAAATTTGA
TGAGTCACCCAAGCTGGCGCTATTAAATGCTCAAGATGAAGCCGTGAGTTTTACCAGCGATATATTAGTTAAGCATGGTA
TTCAACTGGGACGGGATTTCGAACACGAAATATTGCAGTACAACCTTAGCAATCAACCTGCTTCATTAAATATCACAATG
AATGGCGCGACAACAATACCAAACAACGCAATAGCGGTATCATCGACAACAGCAATTTCAGCAAACCAGCCACCAGTGCA
TCAAGCCCCCGCGGTTAAATCTACAAGCTTGATCGCGATTGAATCAACAATTTCAACATCCAACGATCAGTCTTCGCAAA
CAACTTCTGCCACCACACCTAGTCAAGCGGAAATTAGTCAAATGCTGGATTACTGGTATAAACAGGCCAATGAAGACACT
AAAGCTAGCTTCAAAGCAAAAATCAATCAAAGGTGA

Upstream 100 bases:

>100_bases
CGCTATTTATCTGATCTTGATCCACACTAGAATTAACCCTGCTTTCGCAAAATAACTGCCCTATTATTTAGCAACCGACT
CGCAATAACAGAGAAAGTGT

Downstream 100 bases:

>100_bases
TTCGATTCATTTAACATATGAGTTCGAAACTAAGGAGATTTATTAGTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAA
TTGGTTAAAAGCCAACTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKYQSILCTTALILTTVQPATAEITLNLPKNAEVLTVNGRPAVKSDSLILADGINQIAFRYSVQYRQQAETVRYQSDVLI
VRFDASTQILTLRLPAINSARDAKKFDESPKLALLNAQDEAVSFTSDILVKHGIQLGRDFEHEILQYNLSNQPASLNITM
NGATTIPNNAIAVSSTTAISANQPPVHQAPAVKSTSLIAIESTISTSNDQSSQTTSATTPSQAEISQMLDYWYKQANEDT
KASFKAKINQR

Sequences:

>Translated_251_residues
MKYQSILCTTALILTTVQPATAEITLNLPKNAEVLTVNGRPAVKSDSLILADGINQIAFRYSVQYRQQAETVRYQSDVLI
VRFDASTQILTLRLPAINSARDAKKFDESPKLALLNAQDEAVSFTSDILVKHGIQLGRDFEHEILQYNLSNQPASLNITM
NGATTIPNNAIAVSSTTAISANQPPVHQAPAVKSTSLIAIESTISTSNDQSSQTTSATTPSQAEISQMLDYWYKQANEDT
KASFKAKINQR
>Mature_251_residues
MKYQSILCTTALILTTVQPATAEITLNLPKNAEVLTVNGRPAVKSDSLILADGINQIAFRYSVQYRQQAETVRYQSDVLI
VRFDASTQILTLRLPAINSARDAKKFDESPKLALLNAQDEAVSFTSDILVKHGIQLGRDFEHEILQYNLSNQPASLNITM
NGATTIPNNAIAVSSTTAISANQPPVHQAPAVKSTSLIAIESTISTSNDQSSQTTSATTPSQAEISQMLDYWYKQANEDT
KASFKAKINQR

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 27402; Mature: 27402

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYQSILCTTALILTTVQPATAEITLNLPKNAEVLTVNGRPAVKSDSLILADGINQIAFR
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCEEEEE
YSVQYRQQAETVRYQSDVLIVRFDASTQILTLRLPAINSARDAKKFDESPKLALLNAQDE
EEHHHHHHHHHEEECCCEEEEEECCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEECCCH
AVSFTSDILVKHGIQLGRDFEHEILQYNLSNQPASLNITMNGATTIPNNAIAVSSTTAIS
HHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEEEECCCEECCCCEEEEECCEEEE
ANQPPVHQAPAVKSTSLIAIESTISTSNDQSSQTTSATTPSQAEISQMLDYWYKQANEDT
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
KASFKAKINQR
CCEEEEEECCC
>Mature Secondary Structure
MKYQSILCTTALILTTVQPATAEITLNLPKNAEVLTVNGRPAVKSDSLILADGINQIAFR
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCEEEEE
YSVQYRQQAETVRYQSDVLIVRFDASTQILTLRLPAINSARDAKKFDESPKLALLNAQDE
EEHHHHHHHHHEEECCCEEEEEECCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEECCCH
AVSFTSDILVKHGIQLGRDFEHEILQYNLSNQPASLNITMNGATTIPNNAIAVSSTTAIS
HHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEEEECCCEECCCCEEEEECCEEEE
ANQPPVHQAPAVKSTSLIAIESTISTSNDQSSQTTSATTPSQAEISQMLDYWYKQANEDT
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
KASFKAKINQR
CCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA