The gene/protein map for NC_008750 is currently unavailable.
Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120599149

Identifier: 120599149

GI number: 120599149

Start: 2701791

End: 2704430

Strand: Direct

Name: 120599149

Synonym: Sputw3181_2345

Alternate gene names: NA

Gene position: 2701791-2704430 (Clockwise)

Preceding gene: 120599148

Following gene: 120599152

Centisome position: 57.38

GC content: 39.73

Gene sequence:

>2640_bases
ATGAAAAGTGGTATTCGGAACTCTGTGATGATGGAAAAAAAGTCAATATCTGAGCCACAGACCCCATTGACCCAATGGCA
AAATAGCTTGCCGTTTAAATTTAGTCTTGTCCAACTTATCATCGCGAGTATTTTGATTTTTAGCACAGCTTGGGTCATGT
TACGCATTCAAAATCAGCAAATAACAGAACAGCAGGCAGTACTAAATCAGAATCATGGACAGATTGTTATTGCAAAATTG
CAGGAAATGACCTCTCAAGTCGAAAATCTTGTCAATGCAATTGCCAGTATCGCTAAGTTATATCGCTATGACCATGAGCA
ACTCAGTAAGACTATCCCCACTTTGCTTGCGCTTGAAAATCAAAAGGATGTGATATCCGGCGGCGGTATTTGGCCCGAAC
CGAGTGCCTTTAATCAACAAAAGTTTCGCAATAGTCTCTTTTGGTCGCGTAATATTCACGATGAGCTCATTAAGATAGAT
ACCTATAATGATGACGCGTTCCCAAGTTACCACACAGAAGCATGGTATCGCCCCACACGTTATTTCCCCTCAGGAAAAAC
CTTTTGGTCTAAATCTTATATCGACCCAAGCACACAGGAACCAATGATTACAGCCTCGGCTGCTGTCTGGATGGACCATC
AATTTATAGGCGCAGCAACGGCCGATATCAGTTTAGAAAAACTCAATACGCTACTGCGTAATGCAATGACGGATATCAGT
GGTTATGTGATAGTGCTTGATTATCACAATCAGGTATTAGCTTATCCGCGTGGGAAAAATCATACCGCGATCTTGGACCA
AGCAGCAAACTCGTTGCTGACATTTAATGATCTGACAAAACAGCACCCAAACTTTGATCCACTTGCATTAGCCCTAAATA
CGGCTGACAGTGCCTTTGTGACTAAAGCTATTGCTGAACGTGTGTTTACCCAAGAACAAATGGATAATCTCACCCGTTTA
ACAGCAGACAATGAACGCAAAATGCTCACCGCAATTGTTAATAATAATGCTCGCAATCATTTCACAACCCCTCAACAGCT
TGCATCGGTTCCCTTAGCGACAGATCCAATACTCAACACCCCAGCATTAGCATCTATCTTTTTAATGCCCAATACCTACT
GGAAGATATTGGTCGTGACACCCATTGCTCCGCTGCAGGATACAGCCAAACATTTAGTTGAAAAAATAGGAATATATTTA
GTTTTAATTCAACTCATTGGGTTAATTATCTTGTTCATATTGCAACATAGGTTAATCATTACCCCAATCATGAAAATGGT
TGAAGCATTAAAACGTGACGATCCTACTGCCATCGAATTTAAGGCTAAACAACGTCACGATGAAATAGGCTTACTGGCAA
AAACATTACTCTCACGCACTCAACAACTCGATGTCGCCATGGCAAGCCTTGATGCAAGCAATCTCGCCCTAGAACAGCAA
TTGAAAACTCAGCAACTATTTCAACAAGAATTAAATCACCATAAAGAACAATTAAGATCCCTACTTAAATTTTCTAAACA
CCTCATTTATATTAAAGATTTAAGTGGTAAATACACGTTAGTTAACGATAAATATTGCGAAGTACTTGGGATTGAACGCA
GACGAATTATCGGTGTATCTGACTTTGAATTGTTTCAAAGTCAATTAGCACAGACATTTCAAAAAAATGATCAGCGAGTC
ACCCAAAACCAAGATGCCATCCATTTTGAAGAATCAATTCCGACGCCTCACGGATATCAAGTCTATCAAATGACAAAATT
TGATATCAGGGATGATGAAGATAATTCTATTGCCGTTGGTGCTATCGGTTTCAATATGGATCTCAAAAAACGCCAAGAAC
AAGAGCAAGAAAAACGATTCCAGAACCAAGCTGCTCACCTACAAAAGCAACAGAGTAAAATGCAGATAGTCAACGATGAG
AATAATGCTCTGAAACAACAGCTTGCAGAGTTTAACAAAGCGTTCGAGATGCAATTCCAAATCAACCTAAGCAAAGCACA
AAGCCAAAAGCTAATGCAAAATTTCCTTGCTGAAGTCATCACGCAAATAATGCAAGAACAAGATCGCTTACTTGCACAAA
TCTGTCAGACACAAGCCAATGGGGGTGATGAATCTCAAATTGCCATTACTGACATGATGACAGTCCAAGCAAAAAGGCTT
AGGCACATAGCACAACTTTTTAACGCGCATCAAAATGATGTCAGGCCATTACATTTAGCGCTGTTTATGCGCCAATTACT
GGATTTATTACAAGTACAGTTCATTCGCGCTAATGTCACTGTATGCTTAACATGTGATGAAAACCTGATTATCGATGGCA
ACTCATGGCAATATCTGCAACTCTTCTATCGGCTACTCAACAACACACTCAATCATGCCTTTAAAAACCATCATCAAATA
CGGGAAATCACCATTCATCTTCAAAGAAATGCTAATGAACTCCAAGTGGAACTCACTGATAATGGAATTGGTATGACAGA
CCAACAACTTTCACAGTTACAGCAAAATATGGCACAAAATCTCTGCCTAGGGACACTCACTTGCTTAAATTTATGGATGA
AAAATGACCTAAAAGGACAACTCACCATACAAAGTGAGCTTAATAAAGGGACTAAAATTCTCTGCCGTTGGCCATGTTAG

Upstream 100 bases:

>100_bases
ATAAAATTTTCTTCTTAAATCAACCATTATTACCTTCTTTATCCCACTGATTTTGATATAGACCAATAGCAAAAGACTAA
AAAGACGCTAAACTGGCTCA

Downstream 100 bases:

>100_bases
GACTAAACCTATATTCAAGCCGCATATGCGGCTTGATCGAATGGAATGAATGGTAGACGTGACCTATATATATAAAAAAA
TGGTCAAATCTACATTGCCC

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: PAS/PAC Sensor Protein; Sensor Histidine Kinase; Sensory Box Histidine Kinase; Methyl-Accepting Chemotaxis Receptor Protein; Signal Transduction Histidine Kinase; Methyl-Accepting Chemotaxis Sensory Transducer; Multi-Sensor Signal Transduction Histidine Kinase; Methyl-Accepting Chemotaxis Transducer; GGDEF Domain-Containing Protein; Histidine Kinase; Fog Ggdef Domain Containing Protein; Two-Component Hybrid Histidine Kinase; Methyl-Accepting Chemotaxis Protein I; Sensory Histidine Kinase; Sensory Box Protein; Chemotaxis Sensory Transducer; Signal Transduction Histidine Kinase Sensor; PAS Domain-Containing Protein; ATPase Histidine Kinase- DNA Gyrase B- And

Number of amino acids: Translated: 879; Mature: 879

Protein sequence:

>879_residues
MKSGIRNSVMMEKKSISEPQTPLTQWQNSLPFKFSLVQLIIASILIFSTAWVMLRIQNQQITEQQAVLNQNHGQIVIAKL
QEMTSQVENLVNAIASIAKLYRYDHEQLSKTIPTLLALENQKDVISGGGIWPEPSAFNQQKFRNSLFWSRNIHDELIKID
TYNDDAFPSYHTEAWYRPTRYFPSGKTFWSKSYIDPSTQEPMITASAAVWMDHQFIGAATADISLEKLNTLLRNAMTDIS
GYVIVLDYHNQVLAYPRGKNHTAILDQAANSLLTFNDLTKQHPNFDPLALALNTADSAFVTKAIAERVFTQEQMDNLTRL
TADNERKMLTAIVNNNARNHFTTPQQLASVPLATDPILNTPALASIFLMPNTYWKILVVTPIAPLQDTAKHLVEKIGIYL
VLIQLIGLIILFILQHRLIITPIMKMVEALKRDDPTAIEFKAKQRHDEIGLLAKTLLSRTQQLDVAMASLDASNLALEQQ
LKTQQLFQQELNHHKEQLRSLLKFSKHLIYIKDLSGKYTLVNDKYCEVLGIERRRIIGVSDFELFQSQLAQTFQKNDQRV
TQNQDAIHFEESIPTPHGYQVYQMTKFDIRDDEDNSIAVGAIGFNMDLKKRQEQEQEKRFQNQAAHLQKQQSKMQIVNDE
NNALKQQLAEFNKAFEMQFQINLSKAQSQKLMQNFLAEVITQIMQEQDRLLAQICQTQANGGDESQIAITDMMTVQAKRL
RHIAQLFNAHQNDVRPLHLALFMRQLLDLLQVQFIRANVTVCLTCDENLIIDGNSWQYLQLFYRLLNNTLNHAFKNHHQI
REITIHLQRNANELQVELTDNGIGMTDQQLSQLQQNMAQNLCLGTLTCLNLWMKNDLKGQLTIQSELNKGTKILCRWPC

Sequences:

>Translated_879_residues
MKSGIRNSVMMEKKSISEPQTPLTQWQNSLPFKFSLVQLIIASILIFSTAWVMLRIQNQQITEQQAVLNQNHGQIVIAKL
QEMTSQVENLVNAIASIAKLYRYDHEQLSKTIPTLLALENQKDVISGGGIWPEPSAFNQQKFRNSLFWSRNIHDELIKID
TYNDDAFPSYHTEAWYRPTRYFPSGKTFWSKSYIDPSTQEPMITASAAVWMDHQFIGAATADISLEKLNTLLRNAMTDIS
GYVIVLDYHNQVLAYPRGKNHTAILDQAANSLLTFNDLTKQHPNFDPLALALNTADSAFVTKAIAERVFTQEQMDNLTRL
TADNERKMLTAIVNNNARNHFTTPQQLASVPLATDPILNTPALASIFLMPNTYWKILVVTPIAPLQDTAKHLVEKIGIYL
VLIQLIGLIILFILQHRLIITPIMKMVEALKRDDPTAIEFKAKQRHDEIGLLAKTLLSRTQQLDVAMASLDASNLALEQQ
LKTQQLFQQELNHHKEQLRSLLKFSKHLIYIKDLSGKYTLVNDKYCEVLGIERRRIIGVSDFELFQSQLAQTFQKNDQRV
TQNQDAIHFEESIPTPHGYQVYQMTKFDIRDDEDNSIAVGAIGFNMDLKKRQEQEQEKRFQNQAAHLQKQQSKMQIVNDE
NNALKQQLAEFNKAFEMQFQINLSKAQSQKLMQNFLAEVITQIMQEQDRLLAQICQTQANGGDESQIAITDMMTVQAKRL
RHIAQLFNAHQNDVRPLHLALFMRQLLDLLQVQFIRANVTVCLTCDENLIIDGNSWQYLQLFYRLLNNTLNHAFKNHHQI
REITIHLQRNANELQVELTDNGIGMTDQQLSQLQQNMAQNLCLGTLTCLNLWMKNDLKGQLTIQSELNKGTKILCRWPC
>Mature_879_residues
MKSGIRNSVMMEKKSISEPQTPLTQWQNSLPFKFSLVQLIIASILIFSTAWVMLRIQNQQITEQQAVLNQNHGQIVIAKL
QEMTSQVENLVNAIASIAKLYRYDHEQLSKTIPTLLALENQKDVISGGGIWPEPSAFNQQKFRNSLFWSRNIHDELIKID
TYNDDAFPSYHTEAWYRPTRYFPSGKTFWSKSYIDPSTQEPMITASAAVWMDHQFIGAATADISLEKLNTLLRNAMTDIS
GYVIVLDYHNQVLAYPRGKNHTAILDQAANSLLTFNDLTKQHPNFDPLALALNTADSAFVTKAIAERVFTQEQMDNLTRL
TADNERKMLTAIVNNNARNHFTTPQQLASVPLATDPILNTPALASIFLMPNTYWKILVVTPIAPLQDTAKHLVEKIGIYL
VLIQLIGLIILFILQHRLIITPIMKMVEALKRDDPTAIEFKAKQRHDEIGLLAKTLLSRTQQLDVAMASLDASNLALEQQ
LKTQQLFQQELNHHKEQLRSLLKFSKHLIYIKDLSGKYTLVNDKYCEVLGIERRRIIGVSDFELFQSQLAQTFQKNDQRV
TQNQDAIHFEESIPTPHGYQVYQMTKFDIRDDEDNSIAVGAIGFNMDLKKRQEQEQEKRFQNQAAHLQKQQSKMQIVNDE
NNALKQQLAEFNKAFEMQFQINLSKAQSQKLMQNFLAEVITQIMQEQDRLLAQICQTQANGGDESQIAITDMMTVQAKRL
RHIAQLFNAHQNDVRPLHLALFMRQLLDLLQVQFIRANVTVCLTCDENLIIDGNSWQYLQLFYRLLNNTLNHAFKNHHQI
REITIHLQRNANELQVELTDNGIGMTDQQLSQLQQNMAQNLCLGTLTCLNLWMKNDLKGQLTIQSELNKGTKILCRWPC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100817; Mature: 100817

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSGIRNSVMMEKKSISEPQTPLTQWQNSLPFKFSLVQLIIASILIFSTAWVMLRIQNQQ
CCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCHH
ITEQQAVLNQNHGQIVIAKLQEMTSQVENLVNAIASIAKLYRYDHEQLSKTIPTLLALEN
HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECC
QKDVISGGGIWPEPSAFNQQKFRNSLFWSRNIHDELIKIDTYNDDAFPSYHTEAWYRPTR
CCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCC
YFPSGKTFWSKSYIDPSTQEPMITASAAVWMDHQFIGAATADISLEKLNTLLRNAMTDIS
CCCCCCCEECCCCCCCCCCCCEEEEHHHHHCCCHHHCCHHCCCCHHHHHHHHHHHHHHCC
GYVIVLDYHNQVLAYPRGKNHTAILDQAANSLLTFNDLTKQHPNFDPLALALNTADSAFV
CEEEEEECCCCEEECCCCCCCHHHHHHHHHHHEEHHHHHHCCCCCCCEEEEECCCCHHHH
TKAIAERVFTQEQMDNLTRLTADNERKMLTAIVNNNARNHFTTPQQLASVPLATDPILNT
HHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCC
PALASIFLMPNTYWKILVVTPIAPLQDTAKHLVEKIGIYLVLIQLIGLIILFILQHRLII
CHHHEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPIMKMVEALKRDDPTAIEFKAKQRHDEIGLLAKTLLSRTQQLDVAMASLDASNLALEQQ
HHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LKTQQLFQQELNHHKEQLRSLLKFSKHLIYIKDLSGKYTLVNDKYCEVLGIERRRIIGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEECCCHHHHHCCCCCEEECCC
DFELFQSQLAQTFQKNDQRVTQNQDAIHFEESIPTPHGYQVYQMTKFDIRDDEDNSIAVG
HHHHHHHHHHHHHHCCCHHHHCCCCCEEEHHCCCCCCCEEEEEEEEECCCCCCCCCEEEE
AIGFNMDLKKRQEQEQEKRFQNQAAHLQKQQSKMQIVNDENNALKQQLAEFNKAFEMQFQ
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHEEEEEE
INLSKAQSQKLMQNFLAEVITQIMQEQDRLLAQICQTQANGGDESQIAITDMMTVQAKRL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH
RHIAQLFNAHQNDVRPLHLALFMRQLLDLLQVQFIRANVTVCLTCDENLIIDGNSWQYLQ
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECEEEEEEECCCEEEECCCHHHHH
LFYRLLNNTLNHAFKNHHQIREITIHLQRNANELQVELTDNGIGMTDQQLSQLQQNMAQN
HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
LCLGTLTCLNLWMKNDLKGQLTIQSELNKGTKILCRWPC
HHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCEEEEECCC
>Mature Secondary Structure
MKSGIRNSVMMEKKSISEPQTPLTQWQNSLPFKFSLVQLIIASILIFSTAWVMLRIQNQQ
CCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCHH
ITEQQAVLNQNHGQIVIAKLQEMTSQVENLVNAIASIAKLYRYDHEQLSKTIPTLLALEN
HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECC
QKDVISGGGIWPEPSAFNQQKFRNSLFWSRNIHDELIKIDTYNDDAFPSYHTEAWYRPTR
CCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCC
YFPSGKTFWSKSYIDPSTQEPMITASAAVWMDHQFIGAATADISLEKLNTLLRNAMTDIS
CCCCCCCEECCCCCCCCCCCCEEEEHHHHHCCCHHHCCHHCCCCHHHHHHHHHHHHHHCC
GYVIVLDYHNQVLAYPRGKNHTAILDQAANSLLTFNDLTKQHPNFDPLALALNTADSAFV
CEEEEEECCCCEEECCCCCCCHHHHHHHHHHHEEHHHHHHCCCCCCCEEEEECCCCHHHH
TKAIAERVFTQEQMDNLTRLTADNERKMLTAIVNNNARNHFTTPQQLASVPLATDPILNT
HHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCC
PALASIFLMPNTYWKILVVTPIAPLQDTAKHLVEKIGIYLVLIQLIGLIILFILQHRLII
CHHHEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPIMKMVEALKRDDPTAIEFKAKQRHDEIGLLAKTLLSRTQQLDVAMASLDASNLALEQQ
HHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LKTQQLFQQELNHHKEQLRSLLKFSKHLIYIKDLSGKYTLVNDKYCEVLGIERRRIIGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEECCCHHHHHCCCCCEEECCC
DFELFQSQLAQTFQKNDQRVTQNQDAIHFEESIPTPHGYQVYQMTKFDIRDDEDNSIAVG
HHHHHHHHHHHHHHCCCHHHHCCCCCEEEHHCCCCCCCEEEEEEEEECCCCCCCCCEEEE
AIGFNMDLKKRQEQEQEKRFQNQAAHLQKQQSKMQIVNDENNALKQQLAEFNKAFEMQFQ
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHEEEEEE
INLSKAQSQKLMQNFLAEVITQIMQEQDRLLAQICQTQANGGDESQIAITDMMTVQAKRL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH
RHIAQLFNAHQNDVRPLHLALFMRQLLDLLQVQFIRANVTVCLTCDENLIIDGNSWQYLQ
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECEEEEEEECCCEEEECCCHHHHH
LFYRLLNNTLNHAFKNHHQIREITIHLQRNANELQVELTDNGIGMTDQQLSQLQQNMAQN
HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
LCLGTLTCLNLWMKNDLKGQLTIQSELNKGTKILCRWPC
HHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA