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The map label for this gene is ycgB [H]

Identifier: 120599145

GI number: 120599145

Start: 2696809

End: 2698326

Strand: Direct

Name: ycgB [H]

Synonym: Sputw3181_2341

Alternate gene names: 120599145

Gene position: 2696809-2698326 (Clockwise)

Preceding gene: 120599144

Following gene: 120599147

Centisome position: 57.28

GC content: 40.58

Gene sequence:

>1518_bases
ATGGGGAAAACGACATCAAGAACACGATTGAGCGATGGTCCAGATTGGAGCTTTGAGCTGCTGCAGGATTATCTCAAAGA
AATCGAAAGGGTGGCGGCAATTTACAAGCTCAACACCTATCCAAATCAAATTGAAGTCATCACAGCCGAACAAATGATGG
ATGCCTACGCAGGAATAGGTATGCCGATTGGTTATACCCATTGGTCATTTGGCAAACGCTTTATTGAGACGGAACAAGGG
TATAAACGCGGGCAAATGGGGCTTGCCTATGAAATAGTGATTAACTCCAACCCTTGTATTGCCTATTTAATGGAAGAAAA
TACCATTACGATGCAAGCATTGGTGATGGCTCACGCATGTTTCGGACATAACAGCTTCTTTAAAAATAATTATTTATTTA
AAACTTGGACTGATGCCAGCTCAATTATCGATTATTTGGTTTTTGCCAAAAACTATATTAGCGACTGCGAGCAAAAACAT
GGAGCCGAACAAGTTGAAAGCATTATTGACTCCTGCCACGCCTTAATGAATTACGGTGTAGACCGTTATAAACGTCCATC
GGAAATTTCTTTTCGAGAAGAACAAGCAAGACAAAAAGAGCGTGAGGCCTATCTTCAAAGCCAAGTGAATGATTTATGGC
GCACTATTCCAACTCAGCAACAGGATTTATCCCAAACCAAAAAACGACACTTCCCCTCTGAACCGCAGGAAAATATTCTC
TATTTTATCGAGAAAAATGCCCCACTACTTGAGCCATGGCAAAGAGAAATCATTCGCATCGTTCGCAAAATGGCGCAATA
TTTTTATCCACAAAAACAAACTCAAGTAATGAATGAAGGCTGGGCCACCTTCTGGCACTACACGATTTTAAATCACTTAT
ACGATGATGGTGTCGTGACCGACCGTTTTATGATGGAGTTTTTACAAAGCCATACTGGCGTCGTTGCGCAGCCTGAGTAT
AACAGCCGCTATTATAGCGGTATTAACCCCTATGCCCTAGGTTTTGCCATGTTCACCGATATCAGACGAATTTGTGAAGC
ACCAACCGATGAAGATAAAATGTGGTTTCCTGATATCGCGGGCAGTAATTGGCTTGAGACGTTACATTTTGCCATGCAAC
ATTTTAAAGATGAGAGTTTTATTAGCCAATATCTTTCCCCAAGAGTCATTCGCCAATTTAAATTATTTGGCATTCACGAT
GATGAAAAACGCAGTTACCTTTCTGTATCAGCAATTCACGATGAACAAGGTTATCGTGATATTCGTCAATTACTTTCACA
GCAATATAACTTGTCAAACATAGAACCGAATATCCAAGTACACCATGTTGAAATAAATGGTGATAGATCATTAACCCTAA
GGTATGTACCAAACAACGACATTCCGCTTGCCAATAACTATCACGAAGTGTTGAAGCATCTACATCGACTCTGGGGATTT
AATGTTACCCTTGAGCAACAAAACGCCGATGCTAGCATTAATGTGTTAGCAACTTGCCCAAATAATACGACATCCTAA

Upstream 100 bases:

>100_bases
ACACTACGACAACATCGCTGTGCAGCATATACGTCAAGCCGAAGATATTTACCCTGTATTTAGAGAATTATTTAAGAAAC
AGGCGGTTTAAGGGGGCAGT

Downstream 100 bases:

>100_bases
TCATGCCACAAATAATAAAGCCGTCTTCAAATAAAGACGGCTTTAACTTTGTGTTACAGAATAGTGCTCGTGCCTAGCTT
GATCGTTAATTGTCTTGGGC

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MGKTTSRTRLSDGPDWSFELLQDYLKEIERVAAIYKLNTYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIETEQG
YKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACFGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQKH
GAEQVESIIDSCHALMNYGVDRYKRPSEISFREEQARQKEREAYLQSQVNDLWRTIPTQQQDLSQTKKRHFPSEPQENIL
YFIEKNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVTDRFMMEFLQSHTGVVAQPEY
NSRYYSGINPYALGFAMFTDIRRICEAPTDEDKMWFPDIAGSNWLETLHFAMQHFKDESFISQYLSPRVIRQFKLFGIHD
DEKRSYLSVSAIHDEQGYRDIRQLLSQQYNLSNIEPNIQVHHVEINGDRSLTLRYVPNNDIPLANNYHEVLKHLHRLWGF
NVTLEQQNADASINVLATCPNNTTS

Sequences:

>Translated_505_residues
MGKTTSRTRLSDGPDWSFELLQDYLKEIERVAAIYKLNTYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIETEQG
YKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACFGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQKH
GAEQVESIIDSCHALMNYGVDRYKRPSEISFREEQARQKEREAYLQSQVNDLWRTIPTQQQDLSQTKKRHFPSEPQENIL
YFIEKNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVTDRFMMEFLQSHTGVVAQPEY
NSRYYSGINPYALGFAMFTDIRRICEAPTDEDKMWFPDIAGSNWLETLHFAMQHFKDESFISQYLSPRVIRQFKLFGIHD
DEKRSYLSVSAIHDEQGYRDIRQLLSQQYNLSNIEPNIQVHHVEINGDRSLTLRYVPNNDIPLANNYHEVLKHLHRLWGF
NVTLEQQNADASINVLATCPNNTTS
>Mature_504_residues
GKTTSRTRLSDGPDWSFELLQDYLKEIERVAAIYKLNTYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIETEQGY
KRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACFGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQKHG
AEQVESIIDSCHALMNYGVDRYKRPSEISFREEQARQKEREAYLQSQVNDLWRTIPTQQQDLSQTKKRHFPSEPQENILY
FIEKNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVTDRFMMEFLQSHTGVVAQPEYN
SRYYSGINPYALGFAMFTDIRRICEAPTDEDKMWFPDIAGSNWLETLHFAMQHFKDESFISQYLSPRVIRQFKLFGIHDD
EKRSYLSVSAIHDEQGYRDIRQLLSQQYNLSNIEPNIQVHHVEINGDRSLTLRYVPNNDIPLANNYHEVLKHLHRLWGFN
VTLEQQNADASINVLATCPNNTTS

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=500, Percent_Identity=72.6, Blast_Score=802, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59201; Mature: 59070

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTTSRTRLSDGPDWSFELLQDYLKEIERVAAIYKLNTYPNQIEVITAEQMMDAYAGIG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCC
MPIGYTHWSFGKRFIETEQGYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHAC
CCCCCCCHHHHHHHHHHHCCHHCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHH
FGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQKHGAEQVESIIDSCHALMNYGV
HCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH
DRYKRPSEISFREEQARQKEREAYLQSQVNDLWRTIPTQQQDLSQTKKRHFPSEPQENIL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEE
YFIEKNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVT
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHH
DRFMMEFLQSHTGVVAQPEYNSRYYSGINPYALGFAMFTDIRRICEAPTDEDKMWFPDIA
HHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
GSNWLETLHFAMQHFKDESFISQYLSPRVIRQFKLFGIHDDEKRSYLSVSAIHDEQGYRD
CCHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHH
IRQLLSQQYNLSNIEPNIQVHHVEINGDRSLTLRYVPNNDIPLANNYHEVLKHLHRLWGF
HHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
NVTLEQQNADASINVLATCPNNTTS
CEEEECCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
GKTTSRTRLSDGPDWSFELLQDYLKEIERVAAIYKLNTYPNQIEVITAEQMMDAYAGIG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCC
MPIGYTHWSFGKRFIETEQGYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHAC
CCCCCCCHHHHHHHHHHHCCHHCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHH
FGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQKHGAEQVESIIDSCHALMNYGV
HCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH
DRYKRPSEISFREEQARQKEREAYLQSQVNDLWRTIPTQQQDLSQTKKRHFPSEPQENIL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEE
YFIEKNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVT
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHH
DRFMMEFLQSHTGVVAQPEYNSRYYSGINPYALGFAMFTDIRRICEAPTDEDKMWFPDIA
HHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
GSNWLETLHFAMQHFKDESFISQYLSPRVIRQFKLFGIHDDEKRSYLSVSAIHDEQGYRD
CCHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHH
IRQLLSQQYNLSNIEPNIQVHHVEINGDRSLTLRYVPNNDIPLANNYHEVLKHLHRLWGF
HHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
NVTLEQQNADASINVLATCPNNTTS
CEEEECCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]