| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yhaR [H]
Identifier: 120599112
GI number: 120599112
Start: 2661739
End: 2662605
Strand: Direct
Name: yhaR [H]
Synonym: Sputw3181_2308
Alternate gene names: 120599112
Gene position: 2661739-2662605 (Clockwise)
Preceding gene: 120599111
Following gene: 120599113
Centisome position: 56.53
GC content: 51.56
Gene sequence:
>867_bases ATGACTGACACACAACACCAGAACACTAGCACTCAATCCTTAGGCAATTTGCAGCACGCCTTAGACCATTTGCAACATGT AAGTTACGCGCTGAATAACGGCGTAGGCGAGTTAATCCTTAACCGAGCCGAAGTGCACAACGCCTTCGATGAGGTGATGA TTAGCGAAATGATCGTCGTCCTCGGTTATTTTGCCGAGCACAAAGACTGCAAACTGTTGGTATTAAAAGCCAATGGCAAA AACTTCAGCGCTGGCGCCGACTTAAATTGGATGCGCAAACAAGCAAAGATGGATTTCGATCAAAACCTCAATGACGCCAA AGCACTGGCTAAGCTGATGCAGGATTTAGATACCTTTCCAAAACCCACTATCGCCTTAATCCAAGGTGCGGCCTTTGGCG GCGCGCTTGGGTTAATCTGCGCCAGTGATATTGCCATCGCCACCGAGCGTGCCAGTTTCTGCTTAAGCGAAGTCAAACTA GGGCTGATCCCTGCGGTGATTAGCCCCTACGTTGCCCGCGCTATGGGCAATCGCGCCTCACGCCGCTATATGCTGACCGC AGAGCGTTTTGATGCGCAAACAGCGCTCAAACTCAATGTTATCCATGAGATAAACGACGATTTAGCGGCCGCAGCCCAAC CCATTATCACCGCGCTGCTGGCCAACAGTCCGCAGGGAATGGCATGGGTAAAGACCCTACTCGCCCGCCTCGAAGACGGC GTGATAGACCAAGATACGATTGATTACACCAGCGAGCGCATCGCCCGCATTCGGGTATCTGATGAAGGCCAAGAGGGCTT AAACGCCTTTTTTGAGAAACGTCAGCCGAACTGGCACACGCCAACCGATACCCAAGGAGCACTTTAA
Upstream 100 bases:
>100_bases CCTATCGAAGACACCCGCTTCGGCGTCTTCCGTATGTAACGCATCTTGCGATGCCTTACGTATCACTCATAGAGGGAATA ACGATGACGGGAATAAAATA
Downstream 100 bases:
>100_bases TGTTGACCAAGCAGATGTTGACTAACAGCATGTTCACTAAGCTTTTAATTGCTAACCGTGGTGAAATTGCCTGCCGTATT ATCAAAACCGCGCAGGCCAT
Product: enoyl-CoA hydratase/isomerase
Products: trans-2-enoyl-CoA; trans-3-enoyl-CoA; H2O
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTDTQHQNTSTQSLGNLQHALDHLQHVSYALNNGVGELILNRAEVHNAFDEVMISEMIVVLGYFAEHKDCKLLVLKANGK NFSAGADLNWMRKQAKMDFDQNLNDAKALAKLMQDLDTFPKPTIALIQGAAFGGALGLICASDIAIATERASFCLSEVKL GLIPAVISPYVARAMGNRASRRYMLTAERFDAQTALKLNVIHEINDDLAAAAQPIITALLANSPQGMAWVKTLLARLEDG VIDQDTIDYTSERIARIRVSDEGQEGLNAFFEKRQPNWHTPTDTQGAL
Sequences:
>Translated_288_residues MTDTQHQNTSTQSLGNLQHALDHLQHVSYALNNGVGELILNRAEVHNAFDEVMISEMIVVLGYFAEHKDCKLLVLKANGK NFSAGADLNWMRKQAKMDFDQNLNDAKALAKLMQDLDTFPKPTIALIQGAAFGGALGLICASDIAIATERASFCLSEVKL GLIPAVISPYVARAMGNRASRRYMLTAERFDAQTALKLNVIHEINDDLAAAAQPIITALLANSPQGMAWVKTLLARLEDG VIDQDTIDYTSERIARIRVSDEGQEGLNAFFEKRQPNWHTPTDTQGAL >Mature_287_residues TDTQHQNTSTQSLGNLQHALDHLQHVSYALNNGVGELILNRAEVHNAFDEVMISEMIVVLGYFAEHKDCKLLVLKANGKN FSAGADLNWMRKQAKMDFDQNLNDAKALAKLMQDLDTFPKPTIALIQGAAFGGALGLICASDIAIATERASFCLSEVKLG LIPAVISPYVARAMGNRASRRYMLTAERFDAQTALKLNVIHEINDDLAAAAQPIITALLANSPQGMAWVKTLLARLEDGV IDQDTIDYTSERIARIRVSDEGQEGLNAFFEKRQPNWHTPTDTQGAL
Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=270, Percent_Identity=23.7037037037037, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI194097323, Length=256, Percent_Identity=30.46875, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI70995211, Length=186, Percent_Identity=27.4193548387097, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1787659, Length=245, Percent_Identity=27.7551020408163, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788597, Length=254, Percent_Identity=25.9842519685039, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87082183, Length=265, Percent_Identity=26.7924528301887, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI221142681, Length=263, Percent_Identity=26.615969581749, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787660, Length=266, Percent_Identity=30.0751879699248, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1790281, Length=175, Percent_Identity=26.8571428571429, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17540714, Length=214, Percent_Identity=30.8411214953271, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17535521, Length=278, Percent_Identity=25.5395683453237, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI25145438, Length=253, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17540306, Length=253, Percent_Identity=22.1343873517787, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17554946, Length=244, Percent_Identity=25, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24653139, Length=258, Percent_Identity=27.906976744186, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI19920382, Length=225, Percent_Identity=28, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI20129971, Length=173, Percent_Identity=31.2138728323699, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24653477, Length=173, Percent_Identity=31.2138728323699, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI19922422, Length=251, Percent_Identity=22.7091633466135, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: 4.2.1.17
Molecular weight: Translated: 31604; Mature: 31473
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTQHQNTSTQSLGNLQHALDHLQHVSYALNNGVGELILNRAEVHNAFDEVMISEMIVV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGYFAEHKDCKLLVLKANGKNFSAGADLNWMRKQAKMDFDQNLNDAKALAKLMQDLDTFP HHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC KPTIALIQGAAFGGALGLICASDIAIATERASFCLSEVKLGLIPAVISPYVARAMGNRAS CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RRYMLTAERFDAQTALKLNVIHEINDDLAAAAQPIITALLANSPQGMAWVKTLLARLEDG CEEEEEHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC VIDQDTIDYTSERIARIRVSDEGQEGLNAFFEKRQPNWHTPTDTQGAL CCCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TDTQHQNTSTQSLGNLQHALDHLQHVSYALNNGVGELILNRAEVHNAFDEVMISEMIVV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGYFAEHKDCKLLVLKANGKNFSAGADLNWMRKQAKMDFDQNLNDAKALAKLMQDLDTFP HHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC KPTIALIQGAAFGGALGLICASDIAIATERASFCLSEVKLGLIPAVISPYVARAMGNRAS CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RRYMLTAERFDAQTALKLNVIHEINDDLAAAAQPIITALLANSPQGMAWVKTLLARLEDG CEEEEEHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC VIDQDTIDYTSERIARIRVSDEGQEGLNAFFEKRQPNWHTPTDTQGAL CCCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.05 {crotonyl-CoA}} 0.008 {2-decenoyl-CoA}} [C]
Substrates: (3S)-3-hydroxyacyl-CoA
Specific reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O
General reaction: addition (of H2O to carbon carbon double bondelimination (of H2O C-O bond cleavagehydration [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377; 9579061 [H]