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The map label for this gene is yeeY [H]

Identifier: 120599105

GI number: 120599105

Start: 2652669

End: 2653559

Strand: Direct

Name: yeeY [H]

Synonym: Sputw3181_2301

Alternate gene names: 120599105

Gene position: 2652669-2653559 (Clockwise)

Preceding gene: 120599103

Following gene: 120599109

Centisome position: 56.34

GC content: 44.78

Gene sequence:

>891_bases
GTGACCTTAGACCAACTGCTGATGTTTAAAACCGTAGCTGAGGCGGGCTCACTCAAAGCTGCCAGTAACAAGCTACATAA
AACCCAACCCGCCATAAGCCAAAGTATCAAACAGTTAGAATCCCAACTCGATCTTATCCTGTTTAATCGCGAAGGTTATC
GACTCGCCATCACAGAACAAGGTCGAAAACTGCTGCAACATACCCTGCGGGTACTGAATGAAGCGCAAGAAATGAAGCAA
GTAGCGAAGCATTTAGCCAAAGGTAACGAAGCAAGCATCACCTTAGCTTTTGAAGCCTCCTTTAATCTCGCTCGAATTTT
GCCGATTTTAGAGCTGACTCAAAATGAGTTTCCTTATACCCAAATTATTCTCAAACAAGAGTTTTTAACTGGTGCACTCG
AAGCGCTAAATCAAGATAAAGCTGAAATCATCATCTCTGCGGGCGGAATTGAACCCATACGTTCGAGCCATTTAGAATTA
GCCTATTTATTTTCCGGTAGCCTTCTCGATGTTGCCGCACCGCGCTTACTCAGCCGTTATCCCAACCTAAGCCATGTACG
GGAGTTAGTGAACGAATACCAAATCGTGATCCAAGATACAGGGACGGGAACAGCCAATATTGAATTTGGGGTACAGGCGG
GGCAACGACGTTGGTATGTTAATGATTTTTATACCAAGAAAATGCTTATTCAAAGTGGTATGGGCTGGGGCAAGCTGCCG
CACTATATGATTGAAGATTCACTCAAACAGGGCGCATTGATTGCACTGGATCTGCGTGAAAGACAAAATAATATTCAACT
CGATTACTATGTGATGCGAAAACCCCACTCACCTTTAGGCCCCGTGGCACAAGCACTCTGGCAAAAGCTGATCGCCTTTT
CATTGAGCTGA

Upstream 100 bases:

>100_bases
GCAAGAATGGAATCGATTATGAGCCGATAAAAGATAAATAAATATGGAATAAAATCTAATATCTCATAAACTAATAGTTT
ATAACTTGCGAGTAATATTT

Downstream 100 bases:

>100_bases
ATGCTTAAGACTTCAAGCTTCAGGTTTGGTTTTAGTGGCTTTAAATAAGGTGAAGTAACTAAGTTATATGCCCTTATAAA
GTCATCGGCCATAAACAAAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTLDQLLMFKTVAEAGSLKAASNKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQGRKLLQHTLRVLNEAQEMKQ
VAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYTQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLEL
AYLFSGSLLDVAAPRLLSRYPNLSHVRELVNEYQIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
HYMIEDSLKQGALIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSLS

Sequences:

>Translated_296_residues
MTLDQLLMFKTVAEAGSLKAASNKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQGRKLLQHTLRVLNEAQEMKQ
VAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYTQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLEL
AYLFSGSLLDVAAPRLLSRYPNLSHVRELVNEYQIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
HYMIEDSLKQGALIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSLS
>Mature_295_residues
TLDQLLMFKTVAEAGSLKAASNKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQGRKLLQHTLRVLNEAQEMKQV
AKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYTQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELA
YLFSGSLLDVAAPRLLSRYPNLSHVRELVNEYQIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLPH
YMIEDSLKQGALIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=259, Percent_Identity=32.8185328185328, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1786508, Length=306, Percent_Identity=28.7581699346405, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1789492, Length=255, Percent_Identity=29.0196078431373, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787949, Length=255, Percent_Identity=23.921568627451, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI157672245, Length=165, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786401, Length=277, Percent_Identity=23.826714801444, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87082132, Length=280, Percent_Identity=24.2857142857143, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788481, Length=268, Percent_Identity=27.2388059701493, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33361; Mature: 33230

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDQLLMFKTVAEAGSLKAASNKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQ
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEHH
GRKLLQHTLRVLNEAQEMKQVAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHH
QIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELAYLFSGSLLDVAAPRLLSRY
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHC
PNLSHVRELVNEYQIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
CCHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC
HYMIEDSLKQGALIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSLS
HHHHHHHHCCCCEEEEEEHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLDQLLMFKTVAEAGSLKAASNKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQ
CHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEHH
GRKLLQHTLRVLNEAQEMKQVAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHH
QIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELAYLFSGSLLDVAAPRLLSRY
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHC
PNLSHVRELVNEYQIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
CCHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC
HYMIEDSLKQGALIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSLS
HHHHHHHHCCCCEEEEEEHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]