| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is menA [H]
Identifier: 120599103
GI number: 120599103
Start: 2650489
End: 2651364
Strand: Direct
Name: menA [H]
Synonym: Sputw3181_2299
Alternate gene names: 120599103
Gene position: 2650489-2651364 (Clockwise)
Preceding gene: 120599099
Following gene: 120599105
Centisome position: 56.29
GC content: 47.37
Gene sequence:
>876_bases ATGAATCCTTGGATTTTAGCCATAAGACCGCGCACGCTTCCTGCGGCAATAGGGCCATTATTAATTGGTAATATACTTGC CTTACACCTTAACAGTTTTAGCTGGTTAATTGCTGCAACCTCCATGCTCTGCGCCATATTGTTGCAGGTTGCCGTTAACC TTGCTAACGACTACTTTGATTTTAAAAATGGTATCGATACTGCTGAACGTATTGGCCCCATTCGCGTTACCCAAAGTGGT ATGATCCCCGCAAATAGTGTGCGTAATGCCATGATATTGTGTCTTATCCTTGCTCTCGCTGTCGGTTCGTATCTGATTTG GCACGGAGGCTGGCCCATCGCCATTCTCGCCGCCGCCGCTATTTTAGGTGCTCTTGGCTACAGCGGTGGCCCCTATCCCC TCGCCTCCCATGGGCTCGGTGAAGTAGCGGCATTTGTCTTTTTTGGCTTAGTGGCAGTGGTGGGCAGTTATTATCTGCAG GCGGGCGATACGACTATTAATGCGTGGTTATTAGGTTGTGCGATTGGCTTATTTAACGCTGCGATTATGTTGGTGAATAA CACTCGCGACATCCGTACCGACACCCAAGCGGGCAAACATACTCTAGCGGTACGTATTGGCGAAGCTCAGGCAAAAGTGC TTTATCAAGCCTTAATCTATTTGCCCTTTGGTCTAGTCATCGCTGGCTTTTTATTCGGTATTTTACCCGGTTTACCAGTA CTACTTGCGGGATTATCTCTGCTTATTGCCCGCAAACTCAGTAGCGATTTTTATGCCGTTTCTGGTGAAGCCTTAAATCC GTTACTCGGCCGCACAGCTAAGTTAACCATGATTTTCAGTACCTTGTTTAGCGTGGGTTTAGTGTTTACCGCATAA
Upstream 100 bases:
>100_bases TTAAATGCGTTTATTAGATAGTGCTCACTTTCGAGCAAAATATTGTTATGCTACTCCTAATTAAATATCGATTTCTTTTT CGAGATAACGACTGGACGCC
Downstream 100 bases:
>100_bases GAGTAAATCCGCTAAGCTAATGCTACACCACAGCTCAATGCTGAATATAAAAAGGTTCATATCTTCGATAGATACGAACC TTTTTTATTGGCCGCAGCAC
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNPWILAIRPRTLPAAIGPLLIGNILALHLNSFSWLIAATSMLCAILLQVAVNLANDYFDFKNGIDTAERIGPIRVTQSG MIPANSVRNAMILCLILALAVGSYLIWHGGWPIAILAAAAILGALGYSGGPYPLASHGLGEVAAFVFFGLVAVVGSYYLQ AGDTTINAWLLGCAIGLFNAAIMLVNNTRDIRTDTQAGKHTLAVRIGEAQAKVLYQALIYLPFGLVIAGFLFGILPGLPV LLAGLSLLIARKLSSDFYAVSGEALNPLLGRTAKLTMIFSTLFSVGLVFTA
Sequences:
>Translated_291_residues MNPWILAIRPRTLPAAIGPLLIGNILALHLNSFSWLIAATSMLCAILLQVAVNLANDYFDFKNGIDTAERIGPIRVTQSG MIPANSVRNAMILCLILALAVGSYLIWHGGWPIAILAAAAILGALGYSGGPYPLASHGLGEVAAFVFFGLVAVVGSYYLQ AGDTTINAWLLGCAIGLFNAAIMLVNNTRDIRTDTQAGKHTLAVRIGEAQAKVLYQALIYLPFGLVIAGFLFGILPGLPV LLAGLSLLIARKLSSDFYAVSGEALNPLLGRTAKLTMIFSTLFSVGLVFTA >Mature_291_residues MNPWILAIRPRTLPAAIGPLLIGNILALHLNSFSWLIAATSMLCAILLQVAVNLANDYFDFKNGIDTAERIGPIRVTQSG MIPANSVRNAMILCLILALAVGSYLIWHGGWPIAILAAAAILGALGYSGGPYPLASHGLGEVAAFVFFGLVAVVGSYYLQ AGDTTINAWLLGCAIGLFNAAIMLVNNTRDIRTDTQAGKHTLAVRIGEAQAKVLYQALIYLPFGLVIAGFLFGILPGLPV LLAGLSLLIARKLSSDFYAVSGEALNPLLGRTAKLTMIFSTLFSVGLVFTA
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=297, Percent_Identity=28.2828282828283, Blast_Score=88, Evalue=7e-18, Organism=Escherichia coli, GI1790365, Length=298, Percent_Identity=35.5704697986577, Blast_Score=147, Evalue=6e-37, Organism=Drosophila melanogaster, GI17737429, Length=301, Percent_Identity=28.2392026578073, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 30725; Mature: 30725
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPWILAIRPRTLPAAIGPLLIGNILALHLNSFSWLIAATSMLCAILLQVAVNLANDYFD CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKNGIDTAERIGPIRVTQSGMIPANSVRNAMILCLILALAVGSYLIWHGGWPIAILAAAA HHCCCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHH ILGALGYSGGPYPLASHGLGEVAAFVFFGLVAVVGSYYLQAGDTTINAWLLGCAIGLFNA HHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AIMLVNNTRDIRTDTQAGKHTLAVRIGEAQAKVLYQALIYLPFGLVIAGFLFGILPGLPV HEEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLAGLSLLIARKLSSDFYAVSGEALNPLLGRTAKLTMIFSTLFSVGLVFTA HHHHHHHHHHHHHCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPWILAIRPRTLPAAIGPLLIGNILALHLNSFSWLIAATSMLCAILLQVAVNLANDYFD CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKNGIDTAERIGPIRVTQSGMIPANSVRNAMILCLILALAVGSYLIWHGGWPIAILAAAA HHCCCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHH ILGALGYSGGPYPLASHGLGEVAAFVFFGLVAVVGSYYLQAGDTTINAWLLGCAIGLFNA HHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AIMLVNNTRDIRTDTQAGKHTLAVRIGEAQAKVLYQALIYLPFGLVIAGFLFGILPGLPV HEEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLAGLSLLIARKLSSDFYAVSGEALNPLLGRTAKLTMIFSTLFSVGLVFTA HHHHHHHHHHHHHCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]