Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120599042

Identifier: 120599042

GI number: 120599042

Start: 2586434

End: 2587132

Strand: Direct

Name: 120599042

Synonym: Sputw3181_2238

Alternate gene names: NA

Gene position: 2586434-2587132 (Clockwise)

Preceding gene: 120599041

Following gene: 120599043

Centisome position: 54.93

GC content: 42.78

Gene sequence:

>699_bases
ATGTCAACAATAATTCAAAACACACTAGCACCAAAGGTTCAGAATCAATTGATCCATCACCTACCCGCTTTAGAGCAAGC
TGAATTATTATCACAAGCTAAATTAGTCCAACTTAACTTCGCTGATTTACTGTGTCAGCCAGGGGAGTCATATCAATACG
TTTATTTTCCGTTAACGGCATTTATTTCATTGATCGCTAAACTACCAAAACACCCTGCATTAGAAATGGGCTTAATTGGC
TATGAAGGCATGCTTGGTGCAACAACGTTGTTGAGCACTCGACAAGTCCCTTCTGAGGCAATTATCCAAGGTTCAGGTAA
AGCCTGGCGTATCCCAATTGCAACGTTTGAAGACTTACTTGCTCAAAGTAGCAGTCTGAGACAGATATTGGAAACTTACC
TATACCAATTATTATGCCAATTATCACAAAATGCCGTCTGCGCACATTTTCACTCAGTCGAATCTCGGCTTGCACGCTGG
CTATTAATGAGTCACGACCGCATACAGACTAATGAGCTGTTTCTCACCCATCAGTTTTTATCTGATATGTTGGGTGTTAG
GCGAAGCAGTATTACCGAGGCCGCGGGAGAATTGCAGGCCAGCGGCTGTATTTCATATAACCGTGGGCGGTTATATATCC
TCGACAGACAAGGTCTGCTGGCTCGTTGCTGCAGTTGTTATCATTTAATGCGTACTTAA

Upstream 100 bases:

>100_bases
AACGTCAATTATTCCGTAGCCCCATTCTGGTGTTACGGATCTTCTTTTTTGCAGCAGATTTTCTGGTGTTAGGCCTGTAC
CACCAGTGGTAGGAATAGCA

Downstream 100 bases:

>100_bases
CAGTATCTTTTTTACTCAACAAACCAACAAAAATGCCATTATGTGCGCTAGCGTACATAGCATTGATACTTTGCGCTGTA
ACCTCTATAAACGACACTAA

Product: CRP/FNR family transcriptional regulator

Products: NA

Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Transcriptional Regulator; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSTIIQNTLAPKVQNQLIHHLPALEQAELLSQAKLVQLNFADLLCQPGESYQYVYFPLTAFISLIAKLPKHPALEMGLIG
YEGMLGATTLLSTRQVPSEAIIQGSGKAWRIPIATFEDLLAQSSSLRQILETYLYQLLCQLSQNAVCAHFHSVESRLARW
LLMSHDRIQTNELFLTHQFLSDMLGVRRSSITEAAGELQASGCISYNRGRLYILDRQGLLARCCSCYHLMRT

Sequences:

>Translated_232_residues
MSTIIQNTLAPKVQNQLIHHLPALEQAELLSQAKLVQLNFADLLCQPGESYQYVYFPLTAFISLIAKLPKHPALEMGLIG
YEGMLGATTLLSTRQVPSEAIIQGSGKAWRIPIATFEDLLAQSSSLRQILETYLYQLLCQLSQNAVCAHFHSVESRLARW
LLMSHDRIQTNELFLTHQFLSDMLGVRRSSITEAAGELQASGCISYNRGRLYILDRQGLLARCCSCYHLMRT
>Mature_231_residues
STIIQNTLAPKVQNQLIHHLPALEQAELLSQAKLVQLNFADLLCQPGESYQYVYFPLTAFISLIAKLPKHPALEMGLIGY
EGMLGATTLLSTRQVPSEAIIQGSGKAWRIPIATFEDLLAQSSSLRQILETYLYQLLCQLSQNAVCAHFHSVESRLARWL
LMSHDRIQTNELFLTHQFLSDMLGVRRSSITEAAGELQASGCISYNRGRLYILDRQGLLARCCSCYHLMRT

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26054; Mature: 25922

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIIQNTLAPKVQNQLIHHLPALEQAELLSQAKLVQLNFADLLCQPGESYQYVYFPLTA
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEHHHHHCCCCCCCEEEEEEHHH
FISLIAKLPKHPALEMGLIGYEGMLGATTLLSTRQVPSEAIIQGSGKAWRIPIATFEDLL
HHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHH
AQSSSLRQILETYLYQLLCQLSQNAVCAHFHSVESRLARWLLMSHDRIQTNELFLTHQFL
HCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SDMLGVRRSSITEAAGELQASGCISYNRGRLYILDRQGLLARCCSCYHLMRT
HHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
STIIQNTLAPKVQNQLIHHLPALEQAELLSQAKLVQLNFADLLCQPGESYQYVYFPLTA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEHHHHHCCCCCCCEEEEEEHHH
FISLIAKLPKHPALEMGLIGYEGMLGATTLLSTRQVPSEAIIQGSGKAWRIPIATFEDLL
HHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHH
AQSSSLRQILETYLYQLLCQLSQNAVCAHFHSVESRLARWLLMSHDRIQTNELFLTHQFL
HCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SDMLGVRRSSITEAAGELQASGCISYNRGRLYILDRQGLLARCCSCYHLMRT
HHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA