Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120599043

Identifier: 120599043

GI number: 120599043

Start: 2587387

End: 2588022

Strand: Direct

Name: 120599043

Synonym: Sputw3181_2239

Alternate gene names: NA

Gene position: 2587387-2588022 (Clockwise)

Preceding gene: 120599042

Following gene: 120599044

Centisome position: 54.95

GC content: 47.8

Gene sequence:

>636_bases
GTGTCATTAGAGCTTGGTGACGTGGTCTGCGAAGCTGGCTCGAAGCTGCGTTATGTCTATTTTCCACTGGACTCTATTAT
TTCACTGCTCTATGTGATGGAAAATGGTGCATCTGCTGAAATTGCAGTCGTTGGCAATGATGGCATGGTCGGCGTTGCAC
TGTTTATGGGGGGAGAAAGCACCACGAGTCGAGCCGTAGTACAAAGCGCTGGCGTTGCCTATCGGTTGTTTGGTCAACGG
CTCAAAGACGAATTTAACCGCCATGGTGCTCTGCTCCACCTCTTGCTACGTTATAGCCAAGTATTGCTCACCCAAATGGC
CCAAACGGCAGTTTGCAATCGCCACCATAGTATTGAACAGCAACTATGCCGCTGGCTGTTACTCTCTATCGATAGGCTAT
CGGATGATCGCGTATTGATGACGCAGGAATTAATTGCCAATATGCTTGGCGTACGCCGAGAAGGCGTCACCGATGCTGCA
GGAAAACTGCAACGAATGGGAATAATCAATTACAGTCGCGGTAATATTGAGGTACTGAACCGCAAATTGCTGGAGCAAAC
CTGTTGTGAATGTTACTCAGTCGTTAAGCAGGAGTCAGAACGTCTGATGCCACTAAAAAATGGCACTAAAAAATAG

Upstream 100 bases:

>100_bases
AACAGGCACTGAAAAAGGCTAATGCCCCCCCGAAAACAACCGGTTACTAAACGACTTACCTGATGAAGTCAAACAGCGTA
TTTTCCCGCATCTAGAGCTA

Downstream 100 bases:

>100_bases
TCAACCTCGCAGGCTATTTCAGTCATACATACTCTAGATAAACTTTACCGTTGTAAAACCCTATTTTACTAAGGTGAAAG
TTCAGACTTCAGATAGCAAA

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Transcriptional Regulator; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSLELGDVVCEAGSKLRYVYFPLDSIISLLYVMENGASAEIAVVGNDGMVGVALFMGGESTTSRAVVQSAGVAYRLFGQR
LKDEFNRHGALLHLLLRYSQVLLTQMAQTAVCNRHHSIEQQLCRWLLLSIDRLSDDRVLMTQELIANMLGVRREGVTDAA
GKLQRMGIINYSRGNIEVLNRKLLEQTCCECYSVVKQESERLMPLKNGTKK

Sequences:

>Translated_211_residues
MSLELGDVVCEAGSKLRYVYFPLDSIISLLYVMENGASAEIAVVGNDGMVGVALFMGGESTTSRAVVQSAGVAYRLFGQR
LKDEFNRHGALLHLLLRYSQVLLTQMAQTAVCNRHHSIEQQLCRWLLLSIDRLSDDRVLMTQELIANMLGVRREGVTDAA
GKLQRMGIINYSRGNIEVLNRKLLEQTCCECYSVVKQESERLMPLKNGTKK
>Mature_210_residues
SLELGDVVCEAGSKLRYVYFPLDSIISLLYVMENGASAEIAVVGNDGMVGVALFMGGESTTSRAVVQSAGVAYRLFGQRL
KDEFNRHGALLHLLLRYSQVLLTQMAQTAVCNRHHSIEQQLCRWLLLSIDRLSDDRVLMTQELIANMLGVRREGVTDAAG
KLQRMGIINYSRGNIEVLNRKLLEQTCCECYSVVKQESERLMPLKNGTKK

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23544; Mature: 23413

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS51063 HTH_CRP_2 ; PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLELGDVVCEAGSKLRYVYFPLDSIISLLYVMENGASAEIAVVGNDGMVGVALFMGGES
CCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCC
TTSRAVVQSAGVAYRLFGQRLKDEFNRHGALLHLLLRYSQVLLTQMAQTAVCNRHHSIEQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLCRWLLLSIDRLSDDRVLMTQELIANMLGVRREGVTDAAGKLQRMGIINYSRGNIEVLN
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCHHHHH
RKLLEQTCCECYSVVKQESERLMPLKNGTKK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SLELGDVVCEAGSKLRYVYFPLDSIISLLYVMENGASAEIAVVGNDGMVGVALFMGGES
CCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCC
TTSRAVVQSAGVAYRLFGQRLKDEFNRHGALLHLLLRYSQVLLTQMAQTAVCNRHHSIEQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLCRWLLLSIDRLSDDRVLMTQELIANMLGVRREGVTDAAGKLQRMGIINYSRGNIEVLN
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCHHHHH
RKLLEQTCCECYSVVKQESERLMPLKNGTKK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA