| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is adhE [H]
Identifier: 120599019
GI number: 120599019
Start: 2558687
End: 2561290
Strand: Direct
Name: adhE [H]
Synonym: Sputw3181_2214
Alternate gene names: 120599019
Gene position: 2558687-2561290 (Clockwise)
Preceding gene: 120599015
Following gene: 120599024
Centisome position: 54.34
GC content: 47.93
Gene sequence:
>2604_bases ATGTTAGTGACCAATGCACAAGAACTGGATCTGATGGTCGAGCGTGTCGCCAAGGCACAGGCCGAGTATGCAACCTTCAG TCAAGAACAAGTGGATGCGATATTTCGCGCAGCCGCCCTCGCCGCTGCGGATGCGCGTATCTCGCTAGCCAAAATGGCAG CGGCAGAAACACGTATGGGTGTTATTGAGGACAAGGTGATCAAAAACCACTTTGCCTCTGAATATATTTACAACAAGTAT AAAGATGAGAAAACCTGCGGTATTTTGTCTGAAGATCTCACCTTTGGCACAATCACTATCGCCGAGCCAGTTGGCATTAT TTGCGGCATAGTGCCCACGACTAACCCAACATCTACGGCAATATTCAAGGCCTTGATTAGCCTTAAAACCCGCAATGCCA TTATTTTTTCGCCCCATCCAAGGGCTAAAGCCTCAACCACCACTGCCGCAAAATTAGTGCTTGATGCTGCCGTGGCCGCT GGCGCACCGAAAGATATTATTGGCTGGATTGATGAGCCTAGCGTCGCACTATCAAATCAGCTAATGACTCACCCTAAGGT TAATTTGATCCTTGCCACGGGCGGCCCTGGTATGGTGAAAGCCGCCTACTCCTCAGGTAAACCTGCCATTGGTGTGGGCG CAGGAAATACCCCTATCGTTATCGATGAAACCGCCGATATAAAACGCGCGGTGAGTTCTATATTGATGTCCAAAACCTTC GATAACGGGGTGGTTTGCGCATCTGAGCAAGCCGTGATCGTTGTCGATAGCATTTATGAGCAAGTGAAAGAACGCTTCGC AAGCCATGGGGGTTATATCTTATCGGCAAGTGAAACCGCGGCAATGCAAAACGTCATCCTCAAAAATGGTGGCTTAAATG CCGATATCGTGGGGCAAAGTGCGGCGAGTATTGCCAAAATGGCGGGGGTTGAAGTACCTCATTGGACTAAGGTGCTGATT GGTGAAGTGACTGATATTAGTGAAAGCGAAGCCTTCGCCCATGAAAAATTATCGCCACTGCTTGGTATGTACCGCGCTAA AGACTTTAACGATGCCGTCGATCAAGCCGAAGCCTTAGTTGCACTTGGGGGGATTGGCCATACATCAGGACTTTACACCG ACCAAGACACTCAAACAGAACGCGTTAAAACCTTTGGTTTTAGAATGAAAACCGCACGAATTTTAATCAACACTCCCGCT TCACAAGGTGGTATTGGCGATCTCTATAACTTTAAATTGGCCCCGTCTCTCACACTCGGTTGCGGTTCTTGGGGCGGCAA CTCGATTTCAGAAAACGTGGGTCCAAGTCATTTGATCAACAAAAAAACCGTCGCTAAGAGGGCCGAAAACATGCTGTGGC ACAAGCTTCCTTCATCTATTTATTTCCGCCGTGGCAGTCTTCCTATCGCCCTTGAGGAATTAAGTGATAAAAAACGCGCG CTGATCGTCACAGATAGATTTTTGTTCAACCAAGGTTATTGCAACGAAACTATTCGCATTTTAAAGGCTCAAGGCTTAGA AACTGAAATTTTCTATGATGTCGAAGCCGATCCCACCTTAGCCATTGTGCGCCAAGGGGCAAAGGTTGCCTGTAGTTTTA AACCCGATGTCATCATCGCCCTCGGCGGTGGCTCACCCATGGATGCCGCCAAGATTATTTGGGTGATGTACGAACATCCT GAGGTTGATTTTGCCGATCTCGCATTGCGCTTTATGGATATCCGTAAACGTATCTACAAATTCCCAAAAATGGGCACAAA AGCCATGATGGTGGCTATTCCGACAACCTCAGGCACAGGCTCAGAAGTCACACCTTTTGCGGTAGTTACCGATGAGCAAA CAGGTAAAAAATACCCCATTGCTGATTATCAACTCACGCCCAATATGGCGATTGTTGACCCCAATCTTGTGATGGATATG CCTAAGTCACTCACCGCCTTTGGTGGAATTGATGCGGTGACCCATGCACTTGAAGCCTATGTTAGCGTAATGGCGAATGA GTACAGCGATGGCCAAGCACTGCAAGCCCTCGATTTATTGTGCAAATATTTGCCGGATGCCTATAACTTAGGTGCACAAT CCCCAGTCGCCCGTGAAAAGGTTCATAATGGTGCCACCATTGCGGGTATCGCCTTTGCAAACGCATTTCTTGGGATTTGC CACTCGATGGCGCACAAACTCGGTGCCGAGTTTCATCTCGCCCACGGCTTAGCCAATGCGCTGCTGATCAACAATGTGAT ACGTTTTAACGCAACGGATCTGCCCACAAAGCAAGCGGCGTTTAGCCAATATGACCGACCCAAAGCCTTGTGCCGTTATG CAGCCATCGCCGACCATTTGAAACTAGGCGGAAAATCGGATGAAGAGAAAGTGGAAAAACTGCTTGAGAAAATCACACAG CTCAAGAAGACGATTGGCATTCCTGCTTCTATCCAAGAAGCCGGTGTCAACGAAGCCGACTTCCTCGCCAAGTTAGATGT ACTCGCCGAAGATGCCTTTGACGATCAATGCACAGGTGCCAACCCACGTTATCCATTGATTAACGAGTTAAAACAGTTAT TACTCGATAGTTACTATGGTCGCGATTATAGCGATAACAACTAG
Upstream 100 bases:
>100_bases GTATGCTCACACTTTATGAGTGAGTTTAAGTGTAATTTTCTACCATAAAGAAGATTTAGTGAACATGAGCATTCCCTAAA TCTTTTTAGGAGTGTTAATC
Downstream 100 bases:
>100_bases GCTATCACCTAGATAAAAGCAGCACTATATCAACGAAGAAGCCCTCCAATGAGGGCTTTTTAATGCATGTCTTACCATAA GGATGAATACTTGCGTAACG
Product: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH; Pyruvate-formate-lyase deactivase; PFL deactivase [H]
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MLVTNAQELDLMVERVAKAQAEYATFSQEQVDAIFRAAALAAADARISLAKMAAAETRMGVIEDKVIKNHFASEYIYNKY KDEKTCGILSEDLTFGTITIAEPVGIICGIVPTTNPTSTAIFKALISLKTRNAIIFSPHPRAKASTTTAAKLVLDAAVAA GAPKDIIGWIDEPSVALSNQLMTHPKVNLILATGGPGMVKAAYSSGKPAIGVGAGNTPIVIDETADIKRAVSSILMSKTF DNGVVCASEQAVIVVDSIYEQVKERFASHGGYILSASETAAMQNVILKNGGLNADIVGQSAASIAKMAGVEVPHWTKVLI GEVTDISESEAFAHEKLSPLLGMYRAKDFNDAVDQAEALVALGGIGHTSGLYTDQDTQTERVKTFGFRMKTARILINTPA SQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPSHLINKKTVAKRAENMLWHKLPSSIYFRRGSLPIALEELSDKKRA LIVTDRFLFNQGYCNETIRILKAQGLETEIFYDVEADPTLAIVRQGAKVACSFKPDVIIALGGGSPMDAAKIIWVMYEHP EVDFADLALRFMDIRKRIYKFPKMGTKAMMVAIPTTSGTGSEVTPFAVVTDEQTGKKYPIADYQLTPNMAIVDPNLVMDM PKSLTAFGGIDAVTHALEAYVSVMANEYSDGQALQALDLLCKYLPDAYNLGAQSPVAREKVHNGATIAGIAFANAFLGIC HSMAHKLGAEFHLAHGLANALLINNVIRFNATDLPTKQAAFSQYDRPKALCRYAAIADHLKLGGKSDEEKVEKLLEKITQ LKKTIGIPASIQEAGVNEADFLAKLDVLAEDAFDDQCTGANPRYPLINELKQLLLDSYYGRDYSDNN
Sequences:
>Translated_867_residues MLVTNAQELDLMVERVAKAQAEYATFSQEQVDAIFRAAALAAADARISLAKMAAAETRMGVIEDKVIKNHFASEYIYNKY KDEKTCGILSEDLTFGTITIAEPVGIICGIVPTTNPTSTAIFKALISLKTRNAIIFSPHPRAKASTTTAAKLVLDAAVAA GAPKDIIGWIDEPSVALSNQLMTHPKVNLILATGGPGMVKAAYSSGKPAIGVGAGNTPIVIDETADIKRAVSSILMSKTF DNGVVCASEQAVIVVDSIYEQVKERFASHGGYILSASETAAMQNVILKNGGLNADIVGQSAASIAKMAGVEVPHWTKVLI GEVTDISESEAFAHEKLSPLLGMYRAKDFNDAVDQAEALVALGGIGHTSGLYTDQDTQTERVKTFGFRMKTARILINTPA SQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPSHLINKKTVAKRAENMLWHKLPSSIYFRRGSLPIALEELSDKKRA LIVTDRFLFNQGYCNETIRILKAQGLETEIFYDVEADPTLAIVRQGAKVACSFKPDVIIALGGGSPMDAAKIIWVMYEHP EVDFADLALRFMDIRKRIYKFPKMGTKAMMVAIPTTSGTGSEVTPFAVVTDEQTGKKYPIADYQLTPNMAIVDPNLVMDM PKSLTAFGGIDAVTHALEAYVSVMANEYSDGQALQALDLLCKYLPDAYNLGAQSPVAREKVHNGATIAGIAFANAFLGIC HSMAHKLGAEFHLAHGLANALLINNVIRFNATDLPTKQAAFSQYDRPKALCRYAAIADHLKLGGKSDEEKVEKLLEKITQ LKKTIGIPASIQEAGVNEADFLAKLDVLAEDAFDDQCTGANPRYPLINELKQLLLDSYYGRDYSDNN >Mature_867_residues MLVTNAQELDLMVERVAKAQAEYATFSQEQVDAIFRAAALAAADARISLAKMAAAETRMGVIEDKVIKNHFASEYIYNKY KDEKTCGILSEDLTFGTITIAEPVGIICGIVPTTNPTSTAIFKALISLKTRNAIIFSPHPRAKASTTTAAKLVLDAAVAA GAPKDIIGWIDEPSVALSNQLMTHPKVNLILATGGPGMVKAAYSSGKPAIGVGAGNTPIVIDETADIKRAVSSILMSKTF DNGVVCASEQAVIVVDSIYEQVKERFASHGGYILSASETAAMQNVILKNGGLNADIVGQSAASIAKMAGVEVPHWTKVLI GEVTDISESEAFAHEKLSPLLGMYRAKDFNDAVDQAEALVALGGIGHTSGLYTDQDTQTERVKTFGFRMKTARILINTPA SQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPSHLINKKTVAKRAENMLWHKLPSSIYFRRGSLPIALEELSDKKRA LIVTDRFLFNQGYCNETIRILKAQGLETEIFYDVEADPTLAIVRQGAKVACSFKPDVIIALGGGSPMDAAKIIWVMYEHP EVDFADLALRFMDIRKRIYKFPKMGTKAMMVAIPTTSGTGSEVTPFAVVTDEQTGKKYPIADYQLTPNMAIVDPNLVMDM PKSLTAFGGIDAVTHALEAYVSVMANEYSDGQALQALDLLCKYLPDAYNLGAQSPVAREKVHNGATIAGIAFANAFLGIC HSMAHKLGAEFHLAHGLANALLINNVIRFNATDLPTKQAAFSQYDRPKALCRYAAIADHLKLGGKSDEEKVEKLLEKITQ LKKTIGIPASIQEAGVNEADFLAKLDVLAEDAFDDQCTGANPRYPLINELKQLLLDSYYGRDYSDNN
Specific function: This enzyme has three activities:ADH, ACDH, and PFL- deactivase. In aerobic conditions it acts as a hydrogen peroxide scavenger. The PFL deactivase activity catalyzes the quenching of the pyruvate-formate-lyase catalyst in an iron, NAD, and CoA dependent
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=313, Percent_Identity=26.517571884984, Blast_Score=80, Evalue=8e-15, Organism=Escherichia coli, GI1787493, Length=867, Percent_Identity=77.8546712802768, Blast_Score=1373, Evalue=0.0, Organism=Escherichia coli, GI1789163, Length=400, Percent_Identity=32.5, Blast_Score=203, Evalue=5e-53, Organism=Escherichia coli, GI48994951, Length=391, Percent_Identity=36.5728900255754, Blast_Score=199, Evalue=5e-52, Organism=Escherichia coli, GI1788797, Length=336, Percent_Identity=33.9285714285714, Blast_Score=178, Evalue=1e-45, Organism=Escherichia coli, GI87082107, Length=382, Percent_Identity=31.151832460733, Blast_Score=178, Evalue=1e-45, Organism=Escherichia coli, GI1789386, Length=388, Percent_Identity=24.7422680412371, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17537053, Length=280, Percent_Identity=28.2142857142857, Blast_Score=107, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6321181, Length=391, Percent_Identity=34.5268542199489, Blast_Score=184, Evalue=7e-47, Organism=Drosophila melanogaster, GI24657991, Length=420, Percent_Identity=24.047619047619, Blast_Score=80, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 93418; Mature: 93418
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVTNAQELDLMVERVAKAQAEYATFSQEQVDAIFRAAALAAADARISLAKMAAAETRMG CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIEDKVIKNHFASEYIYNKYKDEKTCGILSEDLTFGTITIAEPVGIICGIVPTTNPTSTA HHHHHHHHHHHHHHHHHHHCCCCCHHCEEECCCCEEEEEECCCCCEEEECCCCCCCHHHH IFKALISLKTRNAIIFSPHPRAKASTTTAAKLVLDAAVAAGAPKDIIGWIDEPSVALSNQ HHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHH LMTHPKVNLILATGGPGMVKAAYSSGKPAIGVGAGNTPIVIDETADIKRAVSSILMSKTF HHCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHCC DNGVVCASEQAVIVVDSIYEQVKERFASHGGYILSASETAAMQNVILKNGGLNADIVGQS CCCEEEECCCCEEEHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCEECCCH AASIAKMAGVEVPHWTKVLIGEVTDISESEAFAHEKLSPLLGMYRAKDFNDAVDQAEALV HHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ALGGIGHTSGLYTDQDTQTERVKTFGFRMKTARILINTPASQGGIGDLYNFKLAPSLTLG HCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCEEEECCCEEEE CGSWGGNSISENVGPSHLINKKTVAKRAENMLWHKLPSSIYFRRGSLPIALEELSDKKRA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCEEHHHCCCCCCE LIVTDRFLFNQGYCNETIRILKAQGLETEIFYDVEADPTLAIVRQGAKVACSFKPDVIIA EEEEEHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHEECCCCEEEEECCCCEEEE LGGGSPMDAAKIIWVMYEHPEVDFADLALRFMDIRKRIYKFPKMGTKAMMVAIPTTSGTG ECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC SEVTPFAVVTDEQTGKKYPIADYQLTPNMAIVDPNLVMDMPKSLTAFGGIDAVTHALEAY CCCCCEEEEECCCCCCCCCCCCEEECCCEEEECCHHHHHCCHHHHHHCCHHHHHHHHHHH VSVMANEYSDGQALQALDLLCKYLPDAYNLGAQSPVAREKVHNGATIAGIAFANAFLGIC HHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHH HSMAHKLGAEFHLAHGLANALLINNVIRFNATDLPTKQAAFSQYDRPKALCRYAAIADHL HHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH KLGGKSDEEKVEKLLEKITQLKKTIGIPASIQEAGVNEADFLAKLDVLAEDAFDDQCTGA HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC NPRYPLINELKQLLLDSYYGRDYSDNN CCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLVTNAQELDLMVERVAKAQAEYATFSQEQVDAIFRAAALAAADARISLAKMAAAETRMG CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIEDKVIKNHFASEYIYNKYKDEKTCGILSEDLTFGTITIAEPVGIICGIVPTTNPTSTA HHHHHHHHHHHHHHHHHHHCCCCCHHCEEECCCCEEEEEECCCCCEEEECCCCCCCHHHH IFKALISLKTRNAIIFSPHPRAKASTTTAAKLVLDAAVAAGAPKDIIGWIDEPSVALSNQ HHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHH LMTHPKVNLILATGGPGMVKAAYSSGKPAIGVGAGNTPIVIDETADIKRAVSSILMSKTF HHCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHCC DNGVVCASEQAVIVVDSIYEQVKERFASHGGYILSASETAAMQNVILKNGGLNADIVGQS CCCEEEECCCCEEEHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCEECCCH AASIAKMAGVEVPHWTKVLIGEVTDISESEAFAHEKLSPLLGMYRAKDFNDAVDQAEALV HHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ALGGIGHTSGLYTDQDTQTERVKTFGFRMKTARILINTPASQGGIGDLYNFKLAPSLTLG HCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCEEEECCCEEEE CGSWGGNSISENVGPSHLINKKTVAKRAENMLWHKLPSSIYFRRGSLPIALEELSDKKRA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCEEHHHCCCCCCE LIVTDRFLFNQGYCNETIRILKAQGLETEIFYDVEADPTLAIVRQGAKVACSFKPDVIIA EEEEEHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHEECCCCEEEEECCCCEEEE LGGGSPMDAAKIIWVMYEHPEVDFADLALRFMDIRKRIYKFPKMGTKAMMVAIPTTSGTG ECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC SEVTPFAVVTDEQTGKKYPIADYQLTPNMAIVDPNLVMDMPKSLTAFGGIDAVTHALEAY CCCCCEEEEECCCCCCCCCCCCEEECCCEEEECCHHHHHCCHHHHHHCCHHHHHHHHHHH VSVMANEYSDGQALQALDLLCKYLPDAYNLGAQSPVAREKVHNGATIAGIAFANAFLGIC HHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHH HSMAHKLGAEFHLAHGLANALLINNVIRFNATDLPTKQAAFSQYDRPKALCRYAAIADHL HHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH KLGGKSDEEKVEKLLEKITQLKKTIGIPASIQEAGVNEADFLAKLDVLAEDAFDDQCTGA HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC NPRYPLINELKQLLLDSYYGRDYSDNN CCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]