| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is pabB [H]
Identifier: 120599024
GI number: 120599024
Start: 2567131
End: 2568531
Strand: Direct
Name: pabB [H]
Synonym: Sputw3181_2219
Alternate gene names: 120599024
Gene position: 2567131-2568531 (Clockwise)
Preceding gene: 120599019
Following gene: 120599025
Centisome position: 54.52
GC content: 46.97
Gene sequence:
>1401_bases ATGGCAATTAGGGCGTCAATACAGCTTGCATCACGCCAACTTGACTGGACATTAAGCACCACAGAAGTATTCGAATACTT TGCTAAAGACGAGTGGGCAATTCTGCTCGATTCTGCTAACGCGCCGCATCAAGATGCTAAATTCGATATTATTTGCGCGG CGCCTATTGCCACTTTAGTCACCAAAGGTGAGCGAAGTGAAATAACCCTTATGCAATCAGATCTGACGTTGCCGGCAAAG ACCAACGTAACAGATGATCCATTTGAACTCGTTAACTCATTATTAAATCATTGGTATCCAAACGCCCTTGAAAGTGGCTT CCCTTTTGCAGGAGGCGCCATGGGTAGCTTTAGTTACGATTTAGGGCGTCGAATCGAAACGCTGCCAATGACTGCCAAGC AGGATATTCAACTGCCAGAAATGAATATCGGCTTTTACGACTGGGCGCTTATCTTCAATTACCAAACCCAGTGTTGGCAT TTGTTGCACTATTTAGGCGAGAAAGCCCTCGAGATTGAGTTGAATAAAATTCAACATAAACTCACTAAAAAGCCAAACTC AGCGGCCTTTATGCTCACTAGCCCATGGGCAACACAGATAAATAAAGCCCAATACACGAGAAAATTTGAAGCTGTACAAG CCTATTTACACAGCGGTGATTGCTATCAAATAAATTTAACCCAACGATTTGAGGCAAGTTACCAAGGTGATGAATGGGCG GCGTACTGCCAATTACGTAAGGCCAATAAAGCCCCCTTCTCGGCCTTTATGCGTCTACCGCAAAACGCTATTTTGTCGAT TTCCCCCGAGCGTTTTATCCAGCTTCGCGGTGATGATATTCAAACCAAACCCATCAAAGGTACGATGCCACGTCATGCTG ATCCACTGCTTGATACCAAGGCCGCCAGCACGCTTGCAAGCTCGCCAAAGGATCGTGCTGAGAATGTGATGATTGTCGAT TTGCTGCGCAACGACATTGGCAAAGTGGCCGCAGCCGGTTCAGTACGTGTACCCCATCTCTTTGAGATTGAGAGTTTTCC CGCTGTGCATCACTTAGTCAGTACCGTTACCGCCAAACTCGCTAGCCAATTCACGGCGAGTGATTTACTGCGCGCCGCAT TCCCAGGCGGCTCGATTACCGGCGCACCCAAAATTCGCGCCATGGAAATTATCGAGGAGCTAGAACCGTCACGCAGAAGT TTATACTGTGGTTGTATGGGATATTTAAGCCAAGATGGACAAATGGATACCAGCATCACCATTCGCACACTGATTGCCGA ACGGGGTAAACTCTATTGCTGGGCGGGCGGTGGCATAGTGGCGGATTCAGAAGTGAATGCCGAATATCAAGAAACCTTTG ATAAAATCAGCCGTATTTTACCTTTGCTTGGCGCTGAATGA
Upstream 100 bases:
>100_bases CCTATGTGGCCTTACTTGTTTTTGTTTAATTCTTTCTGGGCCAATATGATACTCTTTCACATCTTTTTGGGCTACATCAC ATTTTAGATAGGATTAATCG
Downstream 100 bases:
>100_bases AAAAACCTTAATTTTGATACTGGATAAACGAGAACTTCGATGGATCAAGCTGAATTTAGATTGAGATTTAATCTACATCC TTTAGCTCGGCAAGATCCGG
Product: para-aminobenzoate synthase subunit I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MAIRASIQLASRQLDWTLSTTEVFEYFAKDEWAILLDSANAPHQDAKFDIICAAPIATLVTKGERSEITLMQSDLTLPAK TNVTDDPFELVNSLLNHWYPNALESGFPFAGGAMGSFSYDLGRRIETLPMTAKQDIQLPEMNIGFYDWALIFNYQTQCWH LLHYLGEKALEIELNKIQHKLTKKPNSAAFMLTSPWATQINKAQYTRKFEAVQAYLHSGDCYQINLTQRFEASYQGDEWA AYCQLRKANKAPFSAFMRLPQNAILSISPERFIQLRGDDIQTKPIKGTMPRHADPLLDTKAASTLASSPKDRAENVMIVD LLRNDIGKVAAAGSVRVPHLFEIESFPAVHHLVSTVTAKLASQFTASDLLRAAFPGGSITGAPKIRAMEIIEELEPSRRS LYCGCMGYLSQDGQMDTSITIRTLIAERGKLYCWAGGGIVADSEVNAEYQETFDKISRILPLLGAE
Sequences:
>Translated_466_residues MAIRASIQLASRQLDWTLSTTEVFEYFAKDEWAILLDSANAPHQDAKFDIICAAPIATLVTKGERSEITLMQSDLTLPAK TNVTDDPFELVNSLLNHWYPNALESGFPFAGGAMGSFSYDLGRRIETLPMTAKQDIQLPEMNIGFYDWALIFNYQTQCWH LLHYLGEKALEIELNKIQHKLTKKPNSAAFMLTSPWATQINKAQYTRKFEAVQAYLHSGDCYQINLTQRFEASYQGDEWA AYCQLRKANKAPFSAFMRLPQNAILSISPERFIQLRGDDIQTKPIKGTMPRHADPLLDTKAASTLASSPKDRAENVMIVD LLRNDIGKVAAAGSVRVPHLFEIESFPAVHHLVSTVTAKLASQFTASDLLRAAFPGGSITGAPKIRAMEIIEELEPSRRS LYCGCMGYLSQDGQMDTSITIRTLIAERGKLYCWAGGGIVADSEVNAEYQETFDKISRILPLLGAE >Mature_465_residues AIRASIQLASRQLDWTLSTTEVFEYFAKDEWAILLDSANAPHQDAKFDIICAAPIATLVTKGERSEITLMQSDLTLPAKT NVTDDPFELVNSLLNHWYPNALESGFPFAGGAMGSFSYDLGRRIETLPMTAKQDIQLPEMNIGFYDWALIFNYQTQCWHL LHYLGEKALEIELNKIQHKLTKKPNSAAFMLTSPWATQINKAQYTRKFEAVQAYLHSGDCYQINLTQRFEASYQGDEWAA YCQLRKANKAPFSAFMRLPQNAILSISPERFIQLRGDDIQTKPIKGTMPRHADPLLDTKAASTLASSPKDRAENVMIVDL LRNDIGKVAAAGSVRVPHLFEIESFPAVHHLVSTVTAKLASQFTASDLLRAAFPGGSITGAPKIRAMEIIEELEPSRRSL YCGCMGYLSQDGQMDTSITIRTLIAERGKLYCWAGGGIVADSEVNAEYQETFDKISRILPLLGAE
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=442, Percent_Identity=56.3348416289593, Blast_Score=490, Evalue=1e-140, Organism=Escherichia coli, GI1787518, Length=391, Percent_Identity=28.6445012787724, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1786809, Length=201, Percent_Identity=28.8557213930348, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI87082077, Length=224, Percent_Identity=25.8928571428571, Blast_Score=69, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=443, Percent_Identity=30.4740406320542, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6324361, Length=400, Percent_Identity=26.5, Blast_Score=153, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 51944; Mature: 51813
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRASIQLASRQLDWTLSTTEVFEYFAKDEWAILLDSANAPHQDAKFDIICAAPIATLV CCEEEEEHHHHCCCCEEECHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHH TKGERSEITLMQSDLTLPAKTNVTDDPFELVNSLLNHWYPNALESGFPFAGGAMGSFSYD CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHH LGRRIETLPMTAKQDIQLPEMNIGFYDWALIFNYQTQCWHLLHYLGEKALEIELNKIQHK HHCCEEECCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHCCCEEEEHHHHHHHH LTKKPNSAAFMLTSPWATQINKAQYTRKFEAVQAYLHSGDCYQINLTQRFEASYQGDEWA HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCHHH AYCQLRKANKAPFSAFMRLPQNAILSISPERFIQLRGDDIQTKPIKGTMPRHADPLLDTK HHHHHHHCCCCHHHHHHHCCCCCEEEECHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHH AASTLASSPKDRAENVMIVDLLRNDIGKVAAAGSVRVPHLFEIESFPAVHHLVSTVTAKL HHHHHHCCCHHHHCCEEEHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH ASQFTASDLLRAAFPGGSITGAPKIRAMEIIEELEPSRRSLYCGCMGYLSQDGQMDTSIT HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHEEHHHHHHHCCCCCCCCHHH IRTLIAERGKLYCWAGGGIVADSEVNAEYQETFDKISRILPLLGAE HHHHHHHCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIRASIQLASRQLDWTLSTTEVFEYFAKDEWAILLDSANAPHQDAKFDIICAAPIATLV CEEEEEHHHHCCCCEEECHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHH TKGERSEITLMQSDLTLPAKTNVTDDPFELVNSLLNHWYPNALESGFPFAGGAMGSFSYD CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHH LGRRIETLPMTAKQDIQLPEMNIGFYDWALIFNYQTQCWHLLHYLGEKALEIELNKIQHK HHCCEEECCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHCCCEEEEHHHHHHHH LTKKPNSAAFMLTSPWATQINKAQYTRKFEAVQAYLHSGDCYQINLTQRFEASYQGDEWA HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCHHH AYCQLRKANKAPFSAFMRLPQNAILSISPERFIQLRGDDIQTKPIKGTMPRHADPLLDTK HHHHHHHCCCCHHHHHHHCCCCCEEEECHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHH AASTLASSPKDRAENVMIVDLLRNDIGKVAAAGSVRVPHLFEIESFPAVHHLVSTVTAKL HHHHHHCCCHHHHCCEEEHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH ASQFTASDLLRAAFPGGSITGAPKIRAMEIIEELEPSRRSLYCGCMGYLSQDGQMDTSIT HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHEEHHHHHHHCCCCCCCCHHH IRTLIAERGKLYCWAGGGIVADSEVNAEYQETFDKISRILPLLGAE HHHHHHHCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]