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The map label for this gene is hypC [H]

Identifier: 120598982

GI number: 120598982

Start: 2507424

End: 2507669

Strand: Direct

Name: hypC [H]

Synonym: Sputw3181_2174

Alternate gene names: 120598982

Gene position: 2507424-2507669 (Clockwise)

Preceding gene: 120598981

Following gene: 120598983

Centisome position: 53.25

GC content: 42.28

Gene sequence:

>246_bases
ATGTGCTTATCCATTCCTTCCCAAGTCGTGGCCATTGATGCCGAGCGCCAGAGTGTCACCGTCGACACCTTAGGGGTTCG
CCGCGATGTCAGTAGTCATTTAATGACTGAGCCGCTTGAAATTGGTGACTATGTGCTTATTCATATTGGCTTTGTGATGA
ATAAAATTGACAAAGAAGATGCACAACAAAGTCTTGAACTTTATCAAGAAATCGTCACAAAACTTGAAAATGAAGCCATG
CATTAA

Upstream 100 bases:

>100_bases
AAATCATTGAAGTCTCAATTAAAGATGGCGACTCAATGCAGGCCGTTGCCCAGTGGCTTAAGGACAATATTCGCCAAACA
TCTGTGGGAGAGTCGCAATA

Downstream 100 bases:

>100_bases
CCCACATTAAATCCTTTTTCGATAAAAGGCGTGCGCTCAATCAGCGCACCAAGGAAAGAGAATGCTTGAACTAAAACACC
TCTACCAAGGCTTTCGCGAT

Product: hydrogenase assembly chaperone hypC/hupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MCLSIPSQVVAIDAERQSVTVDTLGVRRDVSSHLMTEPLEIGDYVLIHIGFVMNKIDKEDAQQSLELYQEIVTKLENEAM
H

Sequences:

>Translated_81_residues
MCLSIPSQVVAIDAERQSVTVDTLGVRRDVSSHLMTEPLEIGDYVLIHIGFVMNKIDKEDAQQSLELYQEIVTKLENEAM
H
>Mature_81_residues
MCLSIPSQVVAIDAERQSVTVDTLGVRRDVSSHLMTEPLEIGDYVLIHIGFVMNKIDKEDAQQSLELYQEIVTKLENEAM
H

Specific function: Required for production of hydrogenase [H]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 9143; Mature: 9143

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLSIPSQVVAIDAERQSVTVDTLGVRRDVSSHLMTEPLEIGDYVLIHIGFVMNKIDKED
CCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHH
AQQSLELYQEIVTKLENEAMH
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCLSIPSQVVAIDAERQSVTVDTLGVRRDVSSHLMTEPLEIGDYVLIHIGFVMNKIDKED
CCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHH
AQQSLELYQEIVTKLENEAMH
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]