| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is fldA [H]
Identifier: 120598939
GI number: 120598939
Start: 2453580
End: 2454107
Strand: Direct
Name: fldA [H]
Synonym: Sputw3181_2131
Alternate gene names: 120598939
Gene position: 2453580-2454107 (Clockwise)
Preceding gene: 120598938
Following gene: 120598940
Centisome position: 52.11
GC content: 43.75
Gene sequence:
>528_bases ATGGCAACTGTAGGTCTTTTTTTCGGTAGCGACACAGGCAACACCGAAGCCGTCGCCAAAATGATCCAGAAAAAACTGGG TAAAAAAATGGTTGAGGTGAAAGATATCGCCAAGAGTACCAAAGAACAGATCGCAGAATATGACCTGCTGCTGTTCGGCA TCCCAACCTGGTATTATGGCGAAGCACAATGTGATTGGGATGATTTCTTTCCTGAGCTTGAGCAAATTGATTTTACCGAT AAACTGGTTGCGATTTTTGGTTGTGGTGACCAAGAAGACTATGCCGAGTATTTCCTTGATGCCATGGGCATGGTAGGCGA TATTGTTCAAGCTCGCGGGGGGATTATCATTGGTCACTGGCCTACTGCAGGTTACAACTTTGAAGCATCCAAAGGTCAAG TTGATGATGACCATTTTATCGGTTTAGGCATTGACGAAGATCGTCAACCAGAGCTGACCGAAGAACGTGTTGACGCTTGG GTTAAACAAATTTACGAAGAAATGTGTTTAGCTGAATTAGAAGATTAA
Upstream 100 bases:
>100_bases GCCAGTTAATCGAATTAATTCTTCAGCGACAAATTGAGTGCTGAATAATAGATAGCCGCAAGATTAACGTATAAGTGAAC TAGACATTAAAGGATAGACA
Downstream 100 bases:
>100_bases TTCTGTTGATCATTTAAAGGAAGCGGCTTAAACGCCGCTTTTTTTATGCATCGATTTGCATGCATAAAAATTAGATTGTT TCATCGCGGGATAACGAAAA
Product: flavodoxin FldA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MATVGLFFGSDTGNTEAVAKMIQKKLGKKMVEVKDIAKSTKEQIAEYDLLLFGIPTWYYGEAQCDWDDFFPELEQIDFTD KLVAIFGCGDQEDYAEYFLDAMGMVGDIVQARGGIIIGHWPTAGYNFEASKGQVDDDHFIGLGIDEDRQPELTEERVDAW VKQIYEEMCLAELED
Sequences:
>Translated_175_residues MATVGLFFGSDTGNTEAVAKMIQKKLGKKMVEVKDIAKSTKEQIAEYDLLLFGIPTWYYGEAQCDWDDFFPELEQIDFTD KLVAIFGCGDQEDYAEYFLDAMGMVGDIVQARGGIIIGHWPTAGYNFEASKGQVDDDHFIGLGIDEDRQPELTEERVDAW VKQIYEEMCLAELED >Mature_174_residues ATVGLFFGSDTGNTEAVAKMIQKKLGKKMVEVKDIAKSTKEQIAEYDLLLFGIPTWYYGEAQCDWDDFFPELEQIDFTDK LVAIFGCGDQEDYAEYFLDAMGMVGDIVQARGGIIIGHWPTAGYNFEASKGQVDDDHFIGLGIDEDRQPELTEERVDAWV KQIYEEMCLAELED
Specific function: Low-potential electron donor to a number of redox enzymes (Potential). Involved in the reactivation of inactive cob(II)alamin in methionine synthase [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1786900, Length=173, Percent_Identity=72.8323699421965, Blast_Score=273, Evalue=4e-75, Organism=Escherichia coli, GI1789262, Length=168, Percent_Identity=39.2857142857143, Blast_Score=142, Evalue=1e-35,
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 19762; Mature: 19631
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVGLFFGSDTGNTEAVAKMIQKKLGKKMVEVKDIAKSTKEQIAEYDLLLFGIPTWYYG CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEECC EAQCDWDDFFPELEQIDFTDKLVAIFGCGDQEDYAEYFLDAMGMVGDIVQARGGIIIGHW CCCCCHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC PTAGYNFEASKGQVDDDHFIGLGIDEDRQPELTEERVDAWVKQIYEEMCLAELED CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATVGLFFGSDTGNTEAVAKMIQKKLGKKMVEVKDIAKSTKEQIAEYDLLLFGIPTWYYG CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEECC EAQCDWDDFFPELEQIDFTDKLVAIFGCGDQEDYAEYFLDAMGMVGDIVQARGGIIIGHW CCCCCHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC PTAGYNFEASKGQVDDDHFIGLGIDEDRQPELTEERVDAWVKQIYEEMCLAELED CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]