Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598940

Identifier: 120598940

GI number: 120598940

Start: 2454217

End: 2455395

Strand: Direct

Name: 120598940

Synonym: Sputw3181_2132

Alternate gene names: NA

Gene position: 2454217-2455395 (Clockwise)

Preceding gene: 120598939

Following gene: 120598941

Centisome position: 52.12

GC content: 42.83

Gene sequence:

>1179_bases
ATGATCAAAACGCCCTGCTCCAATCATTGGGATATCTTTTGCACTGTTGTCGATAACTACGGTGATATCGGCGTCACTTG
GCGTTTAGCCAAACAATTGGTGAATGAATATCAGCTCCCCGTCAATTTATGGGTTGACGATCTTGCAAGCTTCTCCCATA
TCTTACCGACACTCGATCCACGAAAGGCGATTCAAACTTTCAATGACGTGAATATTATTCATTGGATAGAGCCTTTGCCT
ATAGCGTTTGTCGCAGGAAGTGTGCTCATAGAAGCCTTTGCCTGTGAATTACCAGAACAGGTAAAAGAACAGTTGGTTTA
TTTACATCAACATGCTCCCAAATCTGTACCTGTCTGGCTGAATTTAGAGTACCTAAGCGCTGAGGATTGGGTTGAAGGCT
GCCATGGTTTGCCTTCATTACAAGCCAATGGTTTGAAGAAGTATTTCTACTTTCCTGGTTTTAGCGCCAAAACGGGTGGA
CTTATCTGCGAACAAGATTTATTTGCAAAGCGTGATGTATGGCAAGCTAACACTGCCAATAAATTGCAGCTCTTTACTGA
TTTAGGTCTTAAGGGCATTCAGGAACAAGACACAGTGATTAGCGTTTTTAGCTATGAGACCGAGGCGCTACCCGCATTAT
GTGAGTTATGGCAGCAATCGACAGTAAAAATCCATGCACTGATCCCAAAGGGGCGTAGCTTAAACAGTCTGACTCATTTA
CTGCCCTGTGAAATTGCCGCGCTAGTGCCGGGTCAACAGGTAAATCATGGCAATTTGACCCTGCATATTTTACCTATGAC
AGATCAACATGGGTTTGATCGCCTGCTCTGGAGCTGTGATGTTAATATCGTACGCGGTGAAGATAGTTTTCTTCGGGCAC
AATGGGCTGCTAAACCTTTTATTTGGCACATTTATCCACAAGAAGATGACTATCACCTCATAAAATTAGGAGCTTTTATC
CAACTTTACTGCGATAATCTGCTCCCTGAAATTGCACAAACTTGGACTAACTTGAATTTAGCATTCAACCAAGGATTGCA
ATCTGCCGTGGTAAATCATTGGCAAAACCTTAATCCAGTCAGTTTGCCCTTGTTGCAACATGCTAAACAATGGCCAATTG
ACGCAATAAATGCTGCAGATCTCGCAACTCGGCTAGTCCAATTCGTTAAAAAAAGCTAA

Upstream 100 bases:

>100_bases
TCATTTAAAGGAAGCGGCTTAAACGCCGCTTTTTTTATGCATCGATTTGCATGCATAAAAATTAGATTGTTTCATCGCGG
GATAACGAAAAACCACACTC

Downstream 100 bases:

>100_bases
GATGCTGCGCGAAAATAGAAAATCTACATATAGGAAATAGTGTAATGAAAACTGCTCATGAAATCCGTCCTGGTAACGTG
ATCATGTTAGATGGCAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MIKTPCSNHWDIFCTVVDNYGDIGVTWRLAKQLVNEYQLPVNLWVDDLASFSHILPTLDPRKAIQTFNDVNIIHWIEPLP
IAFVAGSVLIEAFACELPEQVKEQLVYLHQHAPKSVPVWLNLEYLSAEDWVEGCHGLPSLQANGLKKYFYFPGFSAKTGG
LICEQDLFAKRDVWQANTANKLQLFTDLGLKGIQEQDTVISVFSYETEALPALCELWQQSTVKIHALIPKGRSLNSLTHL
LPCEIAALVPGQQVNHGNLTLHILPMTDQHGFDRLLWSCDVNIVRGEDSFLRAQWAAKPFIWHIYPQEDDYHLIKLGAFI
QLYCDNLLPEIAQTWTNLNLAFNQGLQSAVVNHWQNLNPVSLPLLQHAKQWPIDAINAADLATRLVQFVKKS

Sequences:

>Translated_392_residues
MIKTPCSNHWDIFCTVVDNYGDIGVTWRLAKQLVNEYQLPVNLWVDDLASFSHILPTLDPRKAIQTFNDVNIIHWIEPLP
IAFVAGSVLIEAFACELPEQVKEQLVYLHQHAPKSVPVWLNLEYLSAEDWVEGCHGLPSLQANGLKKYFYFPGFSAKTGG
LICEQDLFAKRDVWQANTANKLQLFTDLGLKGIQEQDTVISVFSYETEALPALCELWQQSTVKIHALIPKGRSLNSLTHL
LPCEIAALVPGQQVNHGNLTLHILPMTDQHGFDRLLWSCDVNIVRGEDSFLRAQWAAKPFIWHIYPQEDDYHLIKLGAFI
QLYCDNLLPEIAQTWTNLNLAFNQGLQSAVVNHWQNLNPVSLPLLQHAKQWPIDAINAADLATRLVQFVKKS
>Mature_392_residues
MIKTPCSNHWDIFCTVVDNYGDIGVTWRLAKQLVNEYQLPVNLWVDDLASFSHILPTLDPRKAIQTFNDVNIIHWIEPLP
IAFVAGSVLIEAFACELPEQVKEQLVYLHQHAPKSVPVWLNLEYLSAEDWVEGCHGLPSLQANGLKKYFYFPGFSAKTGG
LICEQDLFAKRDVWQANTANKLQLFTDLGLKGIQEQDTVISVFSYETEALPALCELWQQSTVKIHALIPKGRSLNSLTHL
LPCEIAALVPGQQVNHGNLTLHILPMTDQHGFDRLLWSCDVNIVRGEDSFLRAQWAAKPFIWHIYPQEDDYHLIKLGAFI
QLYCDNLLPEIAQTWTNLNLAFNQGLQSAVVNHWQNLNPVSLPLLQHAKQWPIDAINAADLATRLVQFVKKS

Specific function: Unknown

COG id: COG4394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44430; Mature: 44430

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTPCSNHWDIFCTVVDNYGDIGVTWRLAKQLVNEYQLPVNLWVDDLASFSHILPTLDP
CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCH
RKAIQTFNDVNIIHWIEPLPIAFVAGSVLIEAFACELPEQVKEQLVYLHQHAPKSVPVWL
HHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEE
NLEYLSAEDWVEGCHGLPSLQANGLKKYFYFPGFSAKTGGLICEQDLFAKRDVWQANTAN
EEEEECHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEECHHHHHHCCCCCCCCCC
KLQLFTDLGLKGIQEQDTVISVFSYETEALPALCELWQQSTVKIHALIPKGRSLNSLTHL
CEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH
LPCEIAALVPGQQVNHGNLTLHILPMTDQHGFDRLLWSCDVNIVRGEDSFLRAQWAAKPF
HHHHHHHCCCCCEECCCCEEEEEEECCCCCCHHHHHEECCCEEEECCCHHHHHHHCCCCE
IWHIYPQEDDYHLIKLGAFIQLYCDNLLPEIAQTWTNLNLAFNQGLQSAVVNHWQNLNPV
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCC
SLPLLQHAKQWPIDAINAADLATRLVQFVKKS
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKTPCSNHWDIFCTVVDNYGDIGVTWRLAKQLVNEYQLPVNLWVDDLASFSHILPTLDP
CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCH
RKAIQTFNDVNIIHWIEPLPIAFVAGSVLIEAFACELPEQVKEQLVYLHQHAPKSVPVWL
HHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEE
NLEYLSAEDWVEGCHGLPSLQANGLKKYFYFPGFSAKTGGLICEQDLFAKRDVWQANTAN
EEEEECHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEECHHHHHHCCCCCCCCCC
KLQLFTDLGLKGIQEQDTVISVFSYETEALPALCELWQQSTVKIHALIPKGRSLNSLTHL
CEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH
LPCEIAALVPGQQVNHGNLTLHILPMTDQHGFDRLLWSCDVNIVRGEDSFLRAQWAAKPF
HHHHHHHCCCCCEECCCCEEEEEEECCCCCCHHHHHEECCCEEEECCCHHHHHHHCCCCE
IWHIYPQEDDYHLIKLGAFIQLYCDNLLPEIAQTWTNLNLAFNQGLQSAVVNHWQNLNPV
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCC
SLPLLQHAKQWPIDAINAADLATRLVQFVKKS
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA