Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

Click here to switch to the map view.

The map label for this gene is 120598861

Identifier: 120598861

GI number: 120598861

Start: 2363036

End: 2363284

Strand: Direct

Name: 120598861

Synonym: Sputw3181_2052

Alternate gene names: NA

Gene position: 2363036-2363284 (Clockwise)

Preceding gene: 120598860

Following gene: 120598862

Centisome position: 50.19

GC content: 39.36

Gene sequence:

>249_bases
ATGGAAATTATTTATGTGCTTATCCCCATTGCCATGATCTTTGTCGCCATCGCTGTAATGGTCTTTTTTTGGGCGGTTAA
ATCTGAGCAATTTGACGATCTTGACCGTCAAAGTGTTTCTATACTGTTTGATGAAAATACTGACAAACCAAACAATACAG
AAACGGCAGTTACTCAATCATCGGCAGAACTTGATGATATCGCAGCACTGCAAGCTATCAAAAAACAGCAAAAAGGCATG
CCTTTGTGA

Upstream 100 bases:

>100_bases
GTCAGCAAGTTCTTTAATTGTTGTTGGTAATAGTTTGAGATTATTACGCGTAAAAGTGTGATCATCATAGACAGTTTAAT
CGGAATAGTAAGAGGTCATT

Downstream 100 bases:

>100_bases
TCGAGTACAATGTCACCGGTGCCTTTCTGGTTGGATTAATGGGCGCAGCACATTGCTTTGGTATGTGTGGTGGTCTTGTG
GGGGCTTTCTCAGCCCAAAT

Product: cytochrome oxidase maturation protein, cbb3-type

Products: NA

Alternate protein names: Cytochrome Oxidase Maturation Protein Cbb3- Type; Cytochrome Oxidase Maturation -Type; FixS-Like Protein

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MEIIYVLIPIAMIFVAIAVMVFFWAVKSEQFDDLDRQSVSILFDENTDKPNNTETAVTQSSAELDDIAALQAIKKQQKGM
PL

Sequences:

>Translated_82_residues
MEIIYVLIPIAMIFVAIAVMVFFWAVKSEQFDDLDRQSVSILFDENTDKPNNTETAVTQSSAELDDIAALQAIKKQQKGM
PL
>Mature_82_residues
MEIIYVLIPIAMIFVAIAVMVFFWAVKSEQFDDLDRQSVSILFDENTDKPNNTETAVTQSSAELDDIAALQAIKKQQKGM
PL

Specific function: Unknown

COG id: COG3197

COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9207; Mature: 9207

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIYVLIPIAMIFVAIAVMVFFWAVKSEQFDDLDRQSVSILFDENTDKPNNTETAVTQS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCC
SAELDDIAALQAIKKQQKGMPL
CCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEIIYVLIPIAMIFVAIAVMVFFWAVKSEQFDDLDRQSVSILFDENTDKPNNTETAVTQS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCC
SAELDDIAALQAIKKQQKGMPL
CCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA