Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598846

Identifier: 120598846

GI number: 120598846

Start: 2346735

End: 2347091

Strand: Direct

Name: 120598846

Synonym: Sputw3181_2034

Alternate gene names: NA

Gene position: 2346735-2347091 (Clockwise)

Preceding gene: 120598845

Following gene: 120598848

Centisome position: 49.84

GC content: 45.66

Gene sequence:

>357_bases
TTGCAGGCCAAACGAATGAAGCATGAACAAGATATCCGATTCTTAAACGCTTTTGAACGACTTTTTTCACCAGCTGAGCT
TGATACGCTTGGGCGACAAACCGGATTTATGAAACGACGCCGCCAGGTCACACCCCACAGGTTTTGCATGGCGCTGGTCA
GCGCTCTTGGCTCTGCGACAACGAATTCAATTGCTGATATCCAGCGTCAATTTAATCATATGCATGTCACTGGCATACAG
CTAAAACCATTTCATAAACAATTGGTTAAGATGTCTGCACCTGAGTTTATGCGTGAGGTGTTTGAAATACGCAGCATTGG
CTGTGCATCTTCCCGACATGCTTACTCTGAGGGATAA

Upstream 100 bases:

>100_bases
ATGTATAGGGATTATTTTTAGTTCATACGTATGATCTTTAGGATTTGAAGAGGTGCTTTATTCGTGATCTAATTGATTTT
GCGAATAAAAAAGATCACCT

Downstream 100 bases:

>100_bases
GTATCAGGATGTTTTTGACCGTATTATTTTACAAGATGGTAGCAGTTTCGCGGTACATGGCGACTTAATGCACTATTTTC
CAGGGCGTTTTAATGTACAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MQAKRMKHEQDIRFLNAFERLFSPAELDTLGRQTGFMKRRRQVTPHRFCMALVSALGSATTNSIADIQRQFNHMHVTGIQ
LKPFHKQLVKMSAPEFMREVFEIRSIGCASSRHAYSEG

Sequences:

>Translated_118_residues
MQAKRMKHEQDIRFLNAFERLFSPAELDTLGRQTGFMKRRRQVTPHRFCMALVSALGSATTNSIADIQRQFNHMHVTGIQ
LKPFHKQLVKMSAPEFMREVFEIRSIGCASSRHAYSEG
>Mature_118_residues
MQAKRMKHEQDIRFLNAFERLFSPAELDTLGRQTGFMKRRRQVTPHRFCMALVSALGSATTNSIADIQRQFNHMHVTGIQ
LKPFHKQLVKMSAPEFMREVFEIRSIGCASSRHAYSEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13625; Mature: 13625

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKRMKHEQDIRFLNAFERLFSPAELDTLGRQTGFMKRRRQVTPHRFCMALVSALGSAT
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
TNSIADIQRQFNHMHVTGIQLKPFHKQLVKMSAPEFMREVFEIRSIGCASSRHAYSEG
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQAKRMKHEQDIRFLNAFERLFSPAELDTLGRQTGFMKRRRQVTPHRFCMALVSALGSAT
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
TNSIADIQRQFNHMHVTGIQLKPFHKQLVKMSAPEFMREVFEIRSIGCASSRHAYSEG
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA