Click here to switch to the map view.

The map label for this gene is 120598838

Identifier: 120598838

GI number: 120598838

Start: 2339787

End: 2340959

Strand: Direct

Name: 120598838

Synonym: Sputw3181_2026

Alternate gene names: NA

Gene position: 2339787-2340959 (Clockwise)

Preceding gene: 120598828

Following gene: 120598839

Centisome position: 49.69

GC content: 50.72

Gene sequence:

>1173_bases
ATGGCCAGAGACGGGATCACCAAGCATCAGGTTCAGCAGGTTCGGAACGAGCTCATTGCGCAAGGACGCCACCCATCTGT
CGAACTGGTTCGGTCAGAGTTAGGCTCCGGGTCGAATACCACGATTTTGAAGTACTTGAGAGAGCTTGAAGTCGATGAGA
AAGGACGTCTTGACAACCTTTCAGCGCTAAGTGACGAATTAGGCCAGTTCGTGGGCCATTTAGCACAGCGCCTCCAGGAA
GAGGCCATGCAGCGCATTAAGACTACGGAAGAGCGGCATCATCTCGTGATCGCAGAGCGCCAACGACAACTTGACGTGCT
ACGGCAGGAATTGATGGCCATCAGTGAACATCGGGATAAATTGGAACACCAACACCGCGAAGCCTTAGCGCAGATTGAAG
AACTGAAACATGCCCGTCATGAGGATGCGCTGCAGTTGTCTTCTATGACTTCGGAAAATCGCCATCTGAGCGGTACAATC
CAGGATAAGGAAAAGCATATTCAGTCGCTGGAAGAGAAGCATACTCATGCCCGTCATGCTCTTGAGCATTATCGTGAGTC
TGTGAAAACGCAACGGGAACAAGAGCAGCACAGGCATGATCATCAGGTACAACAACTACAGGCCGAGTTACGGTTAAGCC
ACCAAGCGTTGAGCGTTAAACAACAGGAATGTACAACCTTAAAAGAACAAACACAGCAACAGTCGGCGGAATTGCATCAC
GCCACACAGTCGGTCAGCAAGATTGAGCAACAATTATTGGGGAGCCAGAACAGCCAACAACAAACGGAGCAGCAACTATA
TCGTAAAGATACCGAGCTAAACAGATTGCAAAAGCAACACGAAGACTTGCAACAACAGTATGCGGCAGCGGCGGCTAAAG
TCGCCAGTTTGCAGGCAAATGAGCAAGCCTGGCTGCAGGAAAAAGCGGCTTTGTCAGCGTCGCTCAGTACCCAGCAGCAG
CTCTGGCAGACATTCTCCACAGTCAACGCCATTTCGACGCCGGCTCAATATGCCAAGGGCGAAGACGTTATTGTGGTCGA
TGCTGATCATGCCTTATATGACCGCATTGGCCAGGTCGAGCGCTGCGTGAAAAAGGGCAGCACTGTGAAATACTCTGTAA
ATTTTGACGGCGAGACCTATACCTTACCAGACAGGATCCTGAGACTGGCATGA

Upstream 100 bases:

>100_bases
CCTATTATCAGGGGTTAAATTATGTCGATTATTTGCAATTTATGGATATCGTAATATTATGTAATTACATATTACGTAAT
ATTACGATTAAGAGGCAACC

Downstream 100 bases:

>100_bases
CCTAGCATTATCATTGCAACTGGCCATTGTCGGCCAGTTGCATATAATGCAGCACAACCAGTAGTTATCCATCAATGCAT
CACAACACTAAAAACTGCTC

Product: cointegrate resolution protein T

Products: NA

Alternate protein names: TnpT Protein; Integrase-Like Protein; Phage Cointegrase Resolution Protein; Transposon Cointegrate Resolution Protein; Cointegrase; Citron Protein

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MARDGITKHQVQQVRNELIAQGRHPSVELVRSELGSGSNTTILKYLRELEVDEKGRLDNLSALSDELGQFVGHLAQRLQE
EAMQRIKTTEERHHLVIAERQRQLDVLRQELMAISEHRDKLEHQHREALAQIEELKHARHEDALQLSSMTSENRHLSGTI
QDKEKHIQSLEEKHTHARHALEHYRESVKTQREQEQHRHDHQVQQLQAELRLSHQALSVKQQECTTLKEQTQQQSAELHH
ATQSVSKIEQQLLGSQNSQQQTEQQLYRKDTELNRLQKQHEDLQQQYAAAAAKVASLQANEQAWLQEKAALSASLSTQQQ
LWQTFSTVNAISTPAQYAKGEDVIVVDADHALYDRIGQVERCVKKGSTVKYSVNFDGETYTLPDRILRLA

Sequences:

>Translated_390_residues
MARDGITKHQVQQVRNELIAQGRHPSVELVRSELGSGSNTTILKYLRELEVDEKGRLDNLSALSDELGQFVGHLAQRLQE
EAMQRIKTTEERHHLVIAERQRQLDVLRQELMAISEHRDKLEHQHREALAQIEELKHARHEDALQLSSMTSENRHLSGTI
QDKEKHIQSLEEKHTHARHALEHYRESVKTQREQEQHRHDHQVQQLQAELRLSHQALSVKQQECTTLKEQTQQQSAELHH
ATQSVSKIEQQLLGSQNSQQQTEQQLYRKDTELNRLQKQHEDLQQQYAAAAAKVASLQANEQAWLQEKAALSASLSTQQQ
LWQTFSTVNAISTPAQYAKGEDVIVVDADHALYDRIGQVERCVKKGSTVKYSVNFDGETYTLPDRILRLA
>Mature_389_residues
ARDGITKHQVQQVRNELIAQGRHPSVELVRSELGSGSNTTILKYLRELEVDEKGRLDNLSALSDELGQFVGHLAQRLQEE
AMQRIKTTEERHHLVIAERQRQLDVLRQELMAISEHRDKLEHQHREALAQIEELKHARHEDALQLSSMTSENRHLSGTIQ
DKEKHIQSLEEKHTHARHALEHYRESVKTQREQEQHRHDHQVQQLQAELRLSHQALSVKQQECTTLKEQTQQQSAELHHA
TQSVSKIEQQLLGSQNSQQQTEQQLYRKDTELNRLQKQHEDLQQQYAAAAAKVASLQANEQAWLQEKAALSASLSTQQQL
WQTFSTVNAISTPAQYAKGEDVIVVDADHALYDRIGQVERCVKKGSTVKYSVNFDGETYTLPDRILRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44879; Mature: 44747

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDGITKHQVQQVRNELIAQGRHPSVELVRSELGSGSNTTILKYLRELEVDEKGRLDNL
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHH
SALSDELGQFVGHLAQRLQEEAMQRIKTTEERHHLVIAERQRQLDVLRQELMAISEHRDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEHQHREALAQIEELKHARHEDALQLSSMTSENRHLSGTIQDKEKHIQSLEEKHTHARHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LEHYRESVKTQREQEQHRHDHQVQQLQAELRLSHQALSVKQQECTTLKEQTQQQSAELHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATQSVSKIEQQLLGSQNSQQQTEQQLYRKDTELNRLQKQHEDLQQQYAAAAAKVASLQAN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EQAWLQEKAALSASLSTQQQLWQTFSTVNAISTPAQYAKGEDVIVVDADHALYDRIGQVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCHHHHHHHHHHH
RCVKKGSTVKYSVNFDGETYTLPDRILRLA
HHHHCCCCEEEEEECCCCEEECHHHHHHCC
>Mature Secondary Structure 
ARDGITKHQVQQVRNELIAQGRHPSVELVRSELGSGSNTTILKYLRELEVDEKGRLDNL
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHH
SALSDELGQFVGHLAQRLQEEAMQRIKTTEERHHLVIAERQRQLDVLRQELMAISEHRDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEHQHREALAQIEELKHARHEDALQLSSMTSENRHLSGTIQDKEKHIQSLEEKHTHARHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LEHYRESVKTQREQEQHRHDHQVQQLQAELRLSHQALSVKQQECTTLKEQTQQQSAELHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATQSVSKIEQQLLGSQNSQQQTEQQLYRKDTELNRLQKQHEDLQQQYAAAAAKVASLQAN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EQAWLQEKAALSASLSTQQQLWQTFSTVNAISTPAQYAKGEDVIVVDADHALYDRIGQVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCHHHHHHHHHHH
RCVKKGSTVKYSVNFDGETYTLPDRILRLA
HHHHCCCCEEEEEECCCCEEECHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA