Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yigI [C]

Identifier: 120598839

GI number: 120598839

Start: 2341366

End: 2341851

Strand: Direct

Name: yigI [C]

Synonym: Sputw3181_2027

Alternate gene names: 120598839

Gene position: 2341366-2341851 (Clockwise)

Preceding gene: 120598838

Following gene: 120598840

Centisome position: 49.73

GC content: 52.67

Gene sequence:

>486_bases
ATGAACGAGCTAAGCAGACTCCAGCACAGTCATGTTGTTACGGCTGCGTGCCAGTTCACTGAGCAGGTTCCTCACGCTAG
AGCTCTCGGCATTCAGGTCGTCTCGGTAGACCGAGACCAGGTCCGTATGCGTCTGACTCCACAGTCATGGATGTTCGCGC
AAGAGGATACGAAAGAAATCTGCACCAGCTTACTTTATTCGCTGGCAGACTCCGCCGGAGGCTTGGCCGTAATTGCAGGG
GCCATGGAGTTGATGCCCATTGCTACGCTGGATCTGCGCATGGATTATTTGCGGCCTGCCAACGGCGACCGAGCCCTGTT
GGCTGTAGCTACCTGTCGTCATTTAACAGACCAGGTCGCGTTCATTGATTGCGACATTTTCTGCGAGGCTGATAGCGAAT
TATTGGCTACGGCAAAGGCCACCTTCATGAGAAACACTCATGGACAGCAATTCCACTCAGATGGATTAAAGAAGAACAGC
GTATGA

Upstream 100 bases:

>100_bases
GTTATCCACAAGAGAACGCTATCTTCATGACCTATAGAATTCAACTGATCTCCAAAACTTCCGCGCCTGCAAGAAATACA
TACCTAGCTGGGCAGCTTTG

Downstream 100 bases:

>100_bases
GTAAGACAGATGATTTGGCACAACAAAGATCGCGCGCTGCAGAAAGTAGGGAGAAATGTGCTGACTGGAAAGCTCTGTTG
GAGCGTATTCCCTACGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Thioesterase Family Protein Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MNELSRLQHSHVVTAACQFTEQVPHARALGIQVVSVDRDQVRMRLTPQSWMFAQEDTKEICTSLLYSLADSAGGLAVIAG
AMELMPIATLDLRMDYLRPANGDRALLAVATCRHLTDQVAFIDCDIFCEADSELLATAKATFMRNTHGQQFHSDGLKKNS
V

Sequences:

>Translated_161_residues
MNELSRLQHSHVVTAACQFTEQVPHARALGIQVVSVDRDQVRMRLTPQSWMFAQEDTKEICTSLLYSLADSAGGLAVIAG
AMELMPIATLDLRMDYLRPANGDRALLAVATCRHLTDQVAFIDCDIFCEADSELLATAKATFMRNTHGQQFHSDGLKKNS
V
>Mature_161_residues
MNELSRLQHSHVVTAACQFTEQVPHARALGIQVVSVDRDQVRMRLTPQSWMFAQEDTKEICTSLLYSLADSAGGLAVIAG
AMELMPIATLDLRMDYLRPANGDRALLAVATCRHLTDQVAFIDCDIFCEADSELLATAKATFMRNTHGQQFHSDGLKKNS
V

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17767; Mature: 17767

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELSRLQHSHVVTAACQFTEQVPHARALGIQVVSVDRDQVRMRLTPQSWMFAQEDTKEI
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCEEEEECCHHHCCCCCCHHHH
CTSLLYSLADSAGGLAVIAGAMELMPIATLDLRMDYLRPANGDRALLAVATCRHLTDQVA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEE
FIDCDIFCEADSELLATAKATFMRNTHGQQFHSDGLKKNSV
EEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MNELSRLQHSHVVTAACQFTEQVPHARALGIQVVSVDRDQVRMRLTPQSWMFAQEDTKEI
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCEEEEECCHHHCCCCCCHHHH
CTSLLYSLADSAGGLAVIAGAMELMPIATLDLRMDYLRPANGDRALLAVATCRHLTDQVA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEE
FIDCDIFCEADSELLATAKATFMRNTHGQQFHSDGLKKNSV
EEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA