| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120598803
Identifier: 120598803
GI number: 120598803
Start: 2305834
End: 2306109
Strand: Direct
Name: 120598803
Synonym: Sputw3181_1989
Alternate gene names: NA
Gene position: 2305834-2306109 (Clockwise)
Preceding gene: 120598802
Following gene: 120598806
Centisome position: 48.97
GC content: 36.59
Gene sequence:
>276_bases ATGAATAAGGCTGTTAAAAAGATGCTCGCCAACCATGAGAGATTAATTCATTCAGGCGAAGTGACTGTGTTATCCCATAC TCAAAGAGAAAAGGGCGAATGGGTGCAACATACAGTGATGCTCGAAAACTGTGATGTGCCATTTAAATTTCGTCGTGTAA AAAAATACAAAAATTTACAAGGGCAAAAAGTGAGTGTTGTCTATTATCCTGAAACCGAAATGGTGGCAGGTTTTGAAATC GAGATTATGCAAGTAGTTAGAATTAAAAGATTTTAG
Upstream 100 bases:
>100_bases TAAACTCAAGGGATTTGGTCGTTGTGAAAAATTAAGATATGCAGAAATAAAACAGAAAGTTACGTCACTACTGGCGGGCT AGATGATAAAAGGATCGAAC
Downstream 100 bases:
>100_bases TAATGCCCATCGGATCTTGACTCTATCATGTCAGTCCAGATCCGAAGGGCATTTGCTTCAAACAGGATATTCAGAATATT TTATTTAGCATACTGAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MNKAVKKMLANHERLIHSGEVTVLSHTQREKGEWVQHTVMLENCDVPFKFRRVKKYKNLQGQKVSVVYYPETEMVAGFEI EIMQVVRIKRF
Sequences:
>Translated_91_residues MNKAVKKMLANHERLIHSGEVTVLSHTQREKGEWVQHTVMLENCDVPFKFRRVKKYKNLQGQKVSVVYYPETEMVAGFEI EIMQVVRIKRF >Mature_91_residues MNKAVKKMLANHERLIHSGEVTVLSHTQREKGEWVQHTVMLENCDVPFKFRRVKKYKNLQGQKVSVVYYPETEMVAGFEI EIMQVVRIKRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10792; Mature: 10792
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKAVKKMLANHERLIHSGEVTVLSHTQREKGEWVQHTVMLENCDVPFKFRRVKKYKNLQ CCHHHHHHHHHHHHHEECCCEEEEECCCCCCCCHHHHEEEECCCCCCHHHHHHHHHCCCC GQKVSVVYYPETEMVAGFEIEIMQVVRIKRF CCEEEEEECCCCCEECCCHHHHHHHHHHCCC >Mature Secondary Structure MNKAVKKMLANHERLIHSGEVTVLSHTQREKGEWVQHTVMLENCDVPFKFRRVKKYKNLQ CCHHHHHHHHHHHHHEECCCEEEEECCCCCCCCHHHHEEEECCCCCCHHHHHHHHHCCCC GQKVSVVYYPETEMVAGFEIEIMQVVRIKRF CCEEEEEECCCCCEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA