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The map label for this gene is mmgC [H]

Identifier: 120598792

GI number: 120598792

Start: 2291618

End: 2293375

Strand: Direct

Name: mmgC [H]

Synonym: Sputw3181_1978

Alternate gene names: 120598792

Gene position: 2291618-2293375 (Clockwise)

Preceding gene: 120598791

Following gene: 120598795

Centisome position: 48.67

GC content: 46.3

Gene sequence:

>1758_bases
ATGAATCCTTACCAAGCCCCGTTGACGGATATGCGTTTCCTACTGGAACAGGTATTTGATGCCCCAAACACTTGGGCACA
ATTGCCTGAGATTGCTGAAATGGTCGATATTGACACTGCTAATGCCATCCTTGAAGAAGCCGCTAAGATCAGCAGTCAGT
TAATCCATCCGCTTAATCGGACGGGCGATGAGCAGGGCGTGTTGCATCAAGGCAATCAAGTGATTACCCCTGATGGCTAT
AAAACCGTTTATGAGCAGTATTCCCAGGGCGGTTGGATTGGTTTGTGTGGCGATCCTGAATTTGGTGGCATGGGCATGCC
GAAAATGTTGGGGATCTTAGTTGACGAAATGGCTTACAGTGCCTGTAATGCGTTTACGCTTTATGGCTCGTTAACTGCGG
GGGCGGCTTTATGTATCAATGCTCACGGCAGCGAAGAATTGAAACAGGCTTATTTGCCTAAGTTATATTCCGGCGAATGG
GCGGGTGCTATGGATATGACTGAGCCGCAGGCGGGTTCTGATCTGCGTAATATTCGCACACGGGCAGTACCACTGGATGA
TGGCAGTTATGCTATTACTGGCAGCAAGATTTTTATCACGGGTGGCGACCATGATTTAACCGAAAACGTTATCCACTTAG
TGCTAGCAAAGCTGCCTGAAAGTAAAGGTATTTCACTTTTTCTTGTGCCTAAAATTTCAGTGAATACTGACGGTAGTTTA
GGCAGTACAAATGGGGTGAGTGTCGGTTCAATTGAGCACAAAATGGGGCTAAAAGGTTCAGCAACCTGTGTGATGAACTA
TGATAATGCCCAAGGTTTCTTGATTGGCGAGCCTAATCGCGGCTTAGTATGCATGTTCACTATGATGAACTACGAGCGTT
TAGCTATCGGTATTCAAGGCTTAGGCAGTGCCCAAGCAGCTTATCAAATGGCGGCCGATTATGCGAAAGAACGTCATCAA
GGCATCGCCGCTGGCGGCTCACCCACTGGAAGTGAATCTGATCCTATCATTGTTCACGGTGATGTGCGTCGTATGTTGTT
GACCATTCGAGCTATGACAGAAGCGGGTCGCGCTTTGTCTGTGTTTACGGGTCAACAATTGGATTTAGCCAAATATGGCC
AAGATGAAGTGAAGGCCAAAGCGGCGCGCTATGTGGGTCTATTAACCCCAGTGGCCAAAGCATTTTTAACCGATCGCGGT
TTAGATGCAACGATCATGGCGCAGCAAGTCTTTGGTGGTCATGGTTATATTCGTGAGACAGGTATTGAACAATTAGTACG
AGATACTCGTATTGCACAGATTTATGAAGGCACCAACGGTATTCAAGCGATTGACTTTCTTGGTCGTAAAGTGACTGGAG
ACAACTTAGCCGCGTTAAATGAGTTTGTCGCCGATCTCAAAGCACAAATGCGCGCATTTTCCCATGTAGATGCTGTGAAA
GTGGCTGCCGTGTGTGCTCGTTTAGATGCGCTTGCCATTGTTGCCGAAACCATTAATGGACAAAAAGTGGCCCAGCCAGC
CCTGATCAACGCGAGTGCTGTCGACTTTTTAGATGCCTTTGGTTATACACTCTATGGTTTTTATTGGTTAGCAATGGTCG
ATAAAGTTGCTAACCATGAAGATACTGCTTTTGCACAGCAGAAAACCTATCTGGCTAAATTCTATTTTGATAAGTTATTG
CCGAAAGCAGATTATCATTTAGCACAGGTTCGTGCAGGTGATACCAGCACAATGGTAATGCCTGCGGATTTCTTTTAG

Upstream 100 bases:

>100_bases
ATAGTGTGGCAACTTTTAGTCGTGGTATCACGATTGTTTTCTGTAGTGAACTGGTATAAATTAAAACAACTGTTTTAATC
CTACGTTTAAGAGTCTACCA

Downstream 100 bases:

>100_bases
CGCTAATTATACTTACGCTTATTAATTAAAAAGCACTGAATATTCAGTGCTTTTTAAAGAATAATTACTCAGGGGTAATC
TTGGAATGAGCTTGAATCGT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MNPYQAPLTDMRFLLEQVFDAPNTWAQLPEIAEMVDIDTANAILEEAAKISSQLIHPLNRTGDEQGVLHQGNQVITPDGY
KTVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAYSACNAFTLYGSLTAGAALCINAHGSEELKQAYLPKLYSGEW
AGAMDMTEPQAGSDLRNIRTRAVPLDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSL
GSTNGVSVGSIEHKMGLKGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKERHQ
GIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYGQDEVKAKAARYVGLLTPVAKAFLTDRG
LDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLAALNEFVADLKAQMRAFSHVDAVK
VAAVCARLDALAIVAETINGQKVAQPALINASAVDFLDAFGYTLYGFYWLAMVDKVANHEDTAFAQQKTYLAKFYFDKLL
PKADYHLAQVRAGDTSTMVMPADFF

Sequences:

>Translated_585_residues
MNPYQAPLTDMRFLLEQVFDAPNTWAQLPEIAEMVDIDTANAILEEAAKISSQLIHPLNRTGDEQGVLHQGNQVITPDGY
KTVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAYSACNAFTLYGSLTAGAALCINAHGSEELKQAYLPKLYSGEW
AGAMDMTEPQAGSDLRNIRTRAVPLDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSL
GSTNGVSVGSIEHKMGLKGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKERHQ
GIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYGQDEVKAKAARYVGLLTPVAKAFLTDRG
LDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLAALNEFVADLKAQMRAFSHVDAVK
VAAVCARLDALAIVAETINGQKVAQPALINASAVDFLDAFGYTLYGFYWLAMVDKVANHEDTAFAQQKTYLAKFYFDKLL
PKADYHLAQVRAGDTSTMVMPADFF
>Mature_585_residues
MNPYQAPLTDMRFLLEQVFDAPNTWAQLPEIAEMVDIDTANAILEEAAKISSQLIHPLNRTGDEQGVLHQGNQVITPDGY
KTVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAYSACNAFTLYGSLTAGAALCINAHGSEELKQAYLPKLYSGEW
AGAMDMTEPQAGSDLRNIRTRAVPLDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSL
GSTNGVSVGSIEHKMGLKGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKERHQ
GIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGQQLDLAKYGQDEVKAKAARYVGLLTPVAKAFLTDRG
LDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLAALNEFVADLKAQMRAFSHVDAVK
VAAVCARLDALAIVAETINGQKVAQPALINASAVDFLDAFGYTLYGFYWLAMVDKVANHEDTAFAQQKTYLAKFYFDKLL
PKADYHLAQVRAGDTSTMVMPADFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=412, Percent_Identity=26.6990291262136, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI226958412, Length=427, Percent_Identity=27.1662763466042, Blast_Score=113, Evalue=6e-25,
Organism=Homo sapiens, GI226958414, Length=387, Percent_Identity=27.6485788113695, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI7656849, Length=368, Percent_Identity=28.2608695652174, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI21361497, Length=372, Percent_Identity=27.6881720430108, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4501857, Length=387, Percent_Identity=26.8733850129199, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI4557235, Length=425, Percent_Identity=27.0588235294118, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI76496475, Length=425, Percent_Identity=27.0588235294118, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI4557233, Length=443, Percent_Identity=25.5079006772009, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI4557231, Length=354, Percent_Identity=26.5536723163842, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI187960098, Length=354, Percent_Identity=26.5536723163842, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4503943, Length=322, Percent_Identity=29.8136645962733, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI87082384, Length=313, Percent_Identity=28.4345047923323, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87081958, Length=373, Percent_Identity=27.8820375335121, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17538396, Length=385, Percent_Identity=30.9090909090909, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17534899, Length=425, Percent_Identity=27.7647058823529, Blast_Score=119, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17508101, Length=412, Percent_Identity=26.9417475728155, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=425, Percent_Identity=27.5294117647059, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17533517, Length=400, Percent_Identity=26.25, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=417, Percent_Identity=26.378896882494, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=421, Percent_Identity=28.2660332541568, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI86563383, Length=319, Percent_Identity=27.5862068965517, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI86563381, Length=319, Percent_Identity=27.5862068965517, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=355, Percent_Identity=25.9154929577465, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=184, Percent_Identity=32.0652173913043, Blast_Score=86, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=304, Percent_Identity=28.2894736842105, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=228, Percent_Identity=29.3859649122807, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=304, Percent_Identity=27.9605263157895, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355753, Length=462, Percent_Identity=28.3549783549784, Blast_Score=123, Evalue=4e-28,
Organism=Drosophila melanogaster, GI21356377, Length=361, Percent_Identity=26.3157894736842, Blast_Score=108, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24666513, Length=415, Percent_Identity=28.1927710843373, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281363737, Length=426, Percent_Identity=25.1173708920188, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24660351, Length=341, Percent_Identity=28.1524926686217, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24646207, Length=388, Percent_Identity=25.5154639175258, Blast_Score=85, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19920834, Length=404, Percent_Identity=27.4752475247525, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63157; Mature: 63157

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPYQAPLTDMRFLLEQVFDAPNTWAQLPEIAEMVDIDTANAILEEAAKISSQLIHPLNR
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
TGDEQGVLHQGNQVITPDGYKTVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAYS
CCCCCCCEECCCEEECCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
ACNAFTLYGSLTAGAALCINAHGSEELKQAYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT
HHCCEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
RAVPLDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSL
HEEECCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCC
GSTNGVSVGSIEHKMGLKGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQG
CCCCCEEECCCHHHCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEEHHCCEEEEEECCC
LGSAQAAYQMAADYAKERHQGIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALS
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEE
VFTGQQLDLAKYGQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRET
EECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHH
GIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLAALNEFVADLKAQMRAFSHVDAVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAVCARLDALAIVAETINGQKVAQPALINASAVDFLDAFGYTLYGFYWLAMVDKVANHE
HHHHHHHHHHHHHHHHHCCCCHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DTAFAQQKTYLAKFYFDKLLPKADYHLAQVRAGDTSTMVMPADFF
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCC
>Mature Secondary Structure
MNPYQAPLTDMRFLLEQVFDAPNTWAQLPEIAEMVDIDTANAILEEAAKISSQLIHPLNR
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
TGDEQGVLHQGNQVITPDGYKTVYEQYSQGGWIGLCGDPEFGGMGMPKMLGILVDEMAYS
CCCCCCCEECCCEEECCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
ACNAFTLYGSLTAGAALCINAHGSEELKQAYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT
HHCCEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
RAVPLDDGSYAITGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKISVNTDGSL
HEEECCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCC
GSTNGVSVGSIEHKMGLKGSATCVMNYDNAQGFLIGEPNRGLVCMFTMMNYERLAIGIQG
CCCCCEEECCCHHHCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEEHHCCEEEEEECCC
LGSAQAAYQMAADYAKERHQGIAAGGSPTGSESDPIIVHGDVRRMLLTIRAMTEAGRALS
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEE
VFTGQQLDLAKYGQDEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRET
EECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHH
GIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLAALNEFVADLKAQMRAFSHVDAVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAVCARLDALAIVAETINGQKVAQPALINASAVDFLDAFGYTLYGFYWLAMVDKVANHE
HHHHHHHHHHHHHHHHHCCCCHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DTAFAQQKTYLAKFYFDKLLPKADYHLAQVRAGDTSTMVMPADFF
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]