| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yaiL [H]
Identifier: 120598791
GI number: 120598791
Start: 2290861
End: 2291403
Strand: Direct
Name: yaiL [H]
Synonym: Sputw3181_1977
Alternate gene names: 120598791
Gene position: 2290861-2291403 (Clockwise)
Preceding gene: 120598790
Following gene: 120598792
Centisome position: 48.65
GC content: 40.33
Gene sequence:
>543_bases ATGGCTAACGCATTACAAGAGCAGCTACTGAAAGCAGGGCTGGCCAGTAAACAAAAAGTTCGAGACGTTAAGACCCAAAA ACGTCGTGATAAAAAAGCACGAGTAGATGACGGTTCAGCGGCATTAAAGCAAGAAGTAGCTGAGCAAAAACGGCTGCAGG CGGAAAAAGATCGAGCGCTAAATGAACAGCGTTTTGCAGAAGCATCTGAGCGTGGACAGGTGCGTGGTTTAATCACTGAG TTCACTAAGTCTGCGATTAAAATCCCTGCTTATGCAGAAGTAAAATTTAACTATACTCTCGATAATAAAATCTATTCTTT ATATATAGATGAAAAGATCCAAGCGGAGTTACTCAAAGGGCAATTGGGTATTATTAGATATGAAGAAAAGAGTTATCTTG TGCCACATAAGTTAGCTGAACGGGTTAACTTGCTCGTGCCTCAATGGTGTGGCTATTTGTGGAAGCATGATGAATCTAAA GAGGTTGTTGTTGAAGATGATCCTTATGCTGATTATGCTATTCCAGATGATTTAATGTGGTAA
Upstream 100 bases:
>100_bases GAGTTGAGTGAACGGGCTGCAAAAATGTAGTTTGGTGTTAGATTCTAGATATTCAAAATCGAGAACGTTGATTTTATATA GATTAAGTAGGTAATGATCC
Downstream 100 bases:
>100_bases ATCATCATCTAATCGTGAGCTAACGCGAAGACACTCTGGGTGGTAACCCGATAGAATAATGACCCTTAAGGAAACTTAAG GGTTTTTTATACGTTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MANALQEQLLKAGLASKQKVRDVKTQKRRDKKARVDDGSAALKQEVAEQKRLQAEKDRALNEQRFAEASERGQVRGLITE FTKSAIKIPAYAEVKFNYTLDNKIYSLYIDEKIQAELLKGQLGIIRYEEKSYLVPHKLAERVNLLVPQWCGYLWKHDESK EVVVEDDPYADYAIPDDLMW
Sequences:
>Translated_180_residues MANALQEQLLKAGLASKQKVRDVKTQKRRDKKARVDDGSAALKQEVAEQKRLQAEKDRALNEQRFAEASERGQVRGLITE FTKSAIKIPAYAEVKFNYTLDNKIYSLYIDEKIQAELLKGQLGIIRYEEKSYLVPHKLAERVNLLVPQWCGYLWKHDESK EVVVEDDPYADYAIPDDLMW >Mature_179_residues ANALQEQLLKAGLASKQKVRDVKTQKRRDKKARVDDGSAALKQEVAEQKRLQAEKDRALNEQRFAEASERGQVRGLITEF TKSAIKIPAYAEVKFNYTLDNKIYSLYIDEKIQAELLKGQLGIIRYEEKSYLVPHKLAERVNLLVPQWCGYLWKHDESKE VVVEDDPYADYAIPDDLMW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081724, Length=186, Percent_Identity=37.6344086021505, Blast_Score=88, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018636 [H]
Pfam domain/function: PF09831 DUF2058 [H]
EC number: NA
Molecular weight: Translated: 20815; Mature: 20684
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANALQEQLLKAGLASKQKVRDVKTQKRRDKKARVDDGSAALKQEVAEQKRLQAEKDRAL CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH NEQRFAEASERGQVRGLITEFTKSAIKIPAYAEVKFNYTLDNKIYSLYIDEKIQAELLKG HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECHHHHHHHHHC QLGIIRYEEKSYLVPHKLAERVNLLVPQWCGYLWKHDESKEVVVEDDPYADYAIPDDLMW CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure ANALQEQLLKAGLASKQKVRDVKTQKRRDKKARVDDGSAALKQEVAEQKRLQAEKDRAL CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH NEQRFAEASERGQVRGLITEFTKSAIKIPAYAEVKFNYTLDNKIYSLYIDEKIQAELLKG HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECHHHHHHHHHC QLGIIRYEEKSYLVPHKLAERVNLLVPQWCGYLWKHDESKEVVVEDDPYADYAIPDDLMW CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]