Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598565

Identifier: 120598565

GI number: 120598565

Start: 2011608

End: 2012009

Strand: Direct

Name: 120598565

Synonym: Sputw3181_1748

Alternate gene names: NA

Gene position: 2011608-2012009 (Clockwise)

Preceding gene: 120598564

Following gene: 120598566

Centisome position: 42.72

GC content: 42.54

Gene sequence:

>402_bases
ATGGTTTTACGGGAGTTTTCCTTGCTAACAAAAATTCTGTTCACTCTACTGATCGTTATCGGTGCTTGGTTTTTGCTGTT
AAAGCGAGGACGAAGTGTTGGTTCTCAAAGCCAAAGTCATTACCAAGAGAGGTTAACGATAGTGCCTTATGCACCTTTTT
GGCGGCGTTATTTGATGACGGGATTATTTGTACTGATTGGAATTAGCACCTTAAGCTACAGTGTATGGTACTGGCGTGAT
CAGCATAAAATTGTCACTGTGACTATTGTGTCACCCACTGGGACTCATAGTGGTGTGTATCAAGCCCGCAAGGGGGATAT
TTCAGAGGCAAAAATGGTAACAGTGGAAGGGATACATATTCGTTTTTCTACGGCTGAGCGCCTAGAGATCATTGAAGATT
AA

Upstream 100 bases:

>100_bases
CATCCTATGATAGCGTTCTTCTTTTTGTCACCTATTCCTTTTAAGCTTGATCTTACAGGCAGTTTATCCATTTTGACTCG
CGTATAATGCGCTGCTGCGT

Downstream 100 bases:

>100_bases
CTTTTCTTTATTTTACTAAATTATCTTATGCATCTTTTCATTGCTAACTTATGCGGTAAACTAGCGACAATTTTTTAGCC
TGCACTTAAGTGGCCTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MVLREFSLLTKILFTLLIVIGAWFLLLKRGRSVGSQSQSHYQERLTIVPYAPFWRRYLMTGLFVLIGISTLSYSVWYWRD
QHKIVTVTIVSPTGTHSGVYQARKGDISEAKMVTVEGIHIRFSTAERLEIIED

Sequences:

>Translated_133_residues
MVLREFSLLTKILFTLLIVIGAWFLLLKRGRSVGSQSQSHYQERLTIVPYAPFWRRYLMTGLFVLIGISTLSYSVWYWRD
QHKIVTVTIVSPTGTHSGVYQARKGDISEAKMVTVEGIHIRFSTAERLEIIED
>Mature_133_residues
MVLREFSLLTKILFTLLIVIGAWFLLLKRGRSVGSQSQSHYQERLTIVPYAPFWRRYLMTGLFVLIGISTLSYSVWYWRD
QHKIVTVTIVSPTGTHSGVYQARKGDISEAKMVTVEGIHIRFSTAERLEIIED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15335; Mature: 15335

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLREFSLLTKILFTLLIVIGAWFLLLKRGRSVGSQSQSHYQERLTIVPYAPFWRRYLMT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCEEEEECCHHHHHHHHH
GLFVLIGISTLSYSVWYWRDQHKIVTVTIVSPTGTHSGVYQARKGDISEAKMVTVEGIHI
HHHHHHHHHHHHEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
RFSTAERLEIIED
EECCHHHHHCCCC
>Mature Secondary Structure
MVLREFSLLTKILFTLLIVIGAWFLLLKRGRSVGSQSQSHYQERLTIVPYAPFWRRYLMT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCEEEEECCHHHHHHHHH
GLFVLIGISTLSYSVWYWRDQHKIVTVTIVSPTGTHSGVYQARKGDISEAKMVTVEGIHI
HHHHHHHHHHHHEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
RFSTAERLEIIED
EECCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA