| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is adk
Identifier: 120598528
GI number: 120598528
Start: 1969181
End: 1969825
Strand: Direct
Name: adk
Synonym: Sputw3181_1711
Alternate gene names: 120598528
Gene position: 1969181-1969825 (Clockwise)
Preceding gene: 120598527
Following gene: 120598529
Centisome position: 41.82
GC content: 48.68
Gene sequence:
>645_bases ATGCGCATTATCCTATTGGGCGCCCCAGGTGCCGGTAAAGGTACCCAAGCCCAGTTCATTATGGAACAGTATGGTATCCC ACAAATTTCTACTGGCGATATGTTACGTGCCGCCGTTAAAGCCGGTACTCCGCTGGGTTTAGAAGCGAAAAAAGTGATGG ATGCAGGCCAACTGGTTTCTGATGATCTGATCATTGGACTGGTGAAAGAGCGTATCGCACAGGACGACTGTGCTAAAGGT TTTCTGTTAGACGGTTTCCCACGCACTATCCCACAAGCGGATGCGATGGCGGCAAACGGTATTAGCATTGATCACGTGAT TGAAATCGATGTGCCCGACGAAGAAATTGTTAAGCGCATGAGCGGTCGTCGCGTTCATCCTGGTTCTGGTCGTGTTTACC ATGTGGTGTTTAATCCACCTAAAGTGGAAGGTAAAGACGATGTGACCGGTGAAGATTTAGCGATTCGTCCCGATGATGAA GAAGCGACAGTGCGTAAACGCCTCGCGATTTACCATGAGCAAACTAAACCGCTCGTTGAATACTACGGTAAAGTGGCAGC CGCAGGCCAAACGAAGTACAACAAATTTGATGGTACTCAGTCAGTTGCTGCGGTGAGTGAGCAGCTTGCCAGTGTACTTA AATAA
Upstream 100 bases:
>100_bases TGAGGCTAAAGTCGAAGCTAAAAGCCTTCTCAATGGCGGCCAGATGTGCGAAGATCGCCGCCCTAAGAAGAATATCAATG CGAAAAAGAGGACTCTTGAG
Downstream 100 bases:
>100_bases GCCACATTAGCTAAATTCGAGAACAAGTTCTCATATTAAGAAAAAGCCTGCCTAAGCAGGCTTTTTTTATGTGTGACTGA ATGTTAGCCTGCCGAGGTAA
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRIILLGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKG FLLDGFPRTIPQADAMAANGISIDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDE EATVRKRLAIYHEQTKPLVEYYGKVAAAGQTKYNKFDGTQSVAAVSEQLASVLK
Sequences:
>Translated_214_residues MRIILLGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKG FLLDGFPRTIPQADAMAANGISIDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDE EATVRKRLAIYHEQTKPLVEYYGKVAAAGQTKYNKFDGTQSVAAVSEQLASVLK >Mature_214_residues MRIILLGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKG FLLDGFPRTIPQADAMAANGISIDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDE EATVRKRLAIYHEQTKPLVEYYGKVAAAGQTKYNKFDGTQSVAAVSEQLASVLK
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=188, Percent_Identity=50, Blast_Score=196, Evalue=1e-50, Organism=Homo sapiens, GI4502013, Length=188, Percent_Identity=50, Blast_Score=196, Evalue=1e-50, Organism=Homo sapiens, GI19923437, Length=184, Percent_Identity=45.6521739130435, Blast_Score=169, Evalue=1e-42, Organism=Homo sapiens, GI310110345, Length=201, Percent_Identity=39.8009950248756, Blast_Score=146, Evalue=1e-35, Organism=Homo sapiens, GI53832003, Length=201, Percent_Identity=39.8009950248756, Blast_Score=146, Evalue=1e-35, Organism=Homo sapiens, GI8051579, Length=201, Percent_Identity=39.8009950248756, Blast_Score=146, Evalue=1e-35, Organism=Homo sapiens, GI53832001, Length=201, Percent_Identity=39.8009950248756, Blast_Score=146, Evalue=1e-35, Organism=Homo sapiens, GI22749187, Length=206, Percent_Identity=27.6699029126214, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI4502011, Length=212, Percent_Identity=29.2452830188679, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI28144899, Length=181, Percent_Identity=26.5193370165746, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI28144897, Length=181, Percent_Identity=26.5193370165746, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI7706497, Length=221, Percent_Identity=26.6968325791855, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI21450759, Length=139, Percent_Identity=25.8992805755396, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI237858799, Length=138, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1786680, Length=213, Percent_Identity=72.3004694835681, Blast_Score=316, Evalue=7e-88, Organism=Caenorhabditis elegans, GI17552384, Length=188, Percent_Identity=46.8085106382979, Blast_Score=183, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17537943, Length=216, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17567503, Length=182, Percent_Identity=32.967032967033, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17550688, Length=187, Percent_Identity=26.2032085561497, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6320432, Length=190, Percent_Identity=50.5263157894737, Blast_Score=204, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6321018, Length=193, Percent_Identity=44.0414507772021, Blast_Score=151, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6322828, Length=183, Percent_Identity=27.8688524590164, Blast_Score=86, Evalue=5e-18, Organism=Drosophila melanogaster, GI22026816, Length=184, Percent_Identity=51.0869565217391, Blast_Score=195, Evalue=2e-50, Organism=Drosophila melanogaster, GI17737899, Length=184, Percent_Identity=44.5652173913043, Blast_Score=154, Evalue=3e-38, Organism=Drosophila melanogaster, GI24645822, Length=184, Percent_Identity=44.5652173913043, Blast_Score=154, Evalue=3e-38, Organism=Drosophila melanogaster, GI17647141, Length=181, Percent_Identity=30.939226519337, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI24663208, Length=181, Percent_Identity=30.939226519337, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI221459597, Length=194, Percent_Identity=25.7731958762887, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI21356893, Length=194, Percent_Identity=25.7731958762887, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 23099; Mature: 23099
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIILLGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVS CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAMAANGISIDHVIEIDVPDEEIVKRM HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCCEEEEEEEECCHHHHHHHH SGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDEEATVRKRLAIYHEQTKPLVE HCCEECCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCHHHH YYGKVAAAGQTKYNKFDGTQSVAAVSEQLASVLK HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MRIILLGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVS CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAMAANGISIDHVIEIDVPDEEIVKRM HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCCEEEEEEEECCHHHHHHHH SGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDEEATVRKRLAIYHEQTKPLVE HCCEECCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCHHHH YYGKVAAAGQTKYNKFDGTQSVAAVSEQLASVLK HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA