| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is zipA [H]
Identifier: 120598461
GI number: 120598461
Start: 1884002
End: 1885030
Strand: Direct
Name: zipA [H]
Synonym: Sputw3181_1644
Alternate gene names: 120598461
Gene position: 1884002-1885030 (Clockwise)
Preceding gene: 120598460
Following gene: 120598462
Centisome position: 40.01
GC content: 45.29
Gene sequence:
>1029_bases ATGGAAGATTTGCAACTAGTTTTGTTCATTTTGGGCGCCATAGCCATAGTTGCTGTGCTGGTGCATGGATTTTGGTCTAT CAGAAGGCAACAACCTAAGTCATTAAAAGATAGCCCTATGGGCAACTTTTATAAGCAACAAGCGGATAAGGAAAGCCCGC CTAAACGTGTTGATGCCGATGGATTTGATGCGGACGGTATTGGCGCTGTACGAGTGCGTAAGGTGGGGGAGTCGAATCCC CATGAGACGCCACCAATTAGCCCCTATCTTAAACAAGACGTTAAAGCTGAACCTAAACCATTATTCAAGCACACAACGTC AACTGAGATAAAGCAAGAACCCGTTCCACAACCGGATTTCAGTTTGCAGTCGCCTTTAGCGACAGAACAACAGCGTGGCG CTAAAGTATCCCGCCAAGAACCTGTGCTAAATGGTCATGTCCCGCCGTTAGGCCAATCCCATGCGGCGATGGTCGCTCAA AAAGCGCTTGAACAGGAAAAACACGCCCAAAGCACAACGGTACCGACTCAAACAGCCCTATTTGATGAAGACGCTTATCT AGAAAATACTGAGTCAGAAGATGAGTATGCTGAAGAAACCGTGGACGAAGGTTTAGATGAGCCCCGTGATGTTTTGGTAT TACACGTGGTCGCCAAAGAAGGGCAGCAGTTAAATGGTGCTGAATTACTACCGTGCTTTTTAACCTTAAATTTTAAATAT GGTGATATGAATATTTTCCACCGCCATGTTGATAATGCAGGTAATGGGAAGGTATTGTTTTCCATCGCTAATATGTTAAA GCCTGGAGTCTTCGATCCCGATAATATGGAGCAATTTAGCACTCAAGGAGTGGTGTTTTTTATGACCTTGCCTTGCTATG GCGATGCCTTAATGAATTTTTCTATTATGCTGAACTCAGCGCGCCAACTCGCTGATGATATTGATGCAGTCGTGCTCGAC GGTCAACGCCAACCTTGGGGCGAGTTCACTAAACAAGATTATTTACACCGTATTCGCGCTAATGCGTAA
Upstream 100 bases:
>100_bases CTATGTACGAGCCGGGTGTATCTCGTATAGTTGCAGTAGATATAGAGCAAGCGGTGGCGATGGCTGACGCTGGATAACTA GAAGAAAGACAGGGTAACCA
Downstream 100 bases:
>100_bases CATTAAATCACTCTGACATCATGAGGCCGCAATTGCGGCCTCATTTTTGTGTTCTAAAGAGATCTGGATAAAAAATATGC AAGACATTCAACTCGATAAA
Product: cell division protein ZipA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MEDLQLVLFILGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKQQADKESPPKRVDADGFDADGIGAVRVRKVGESNP HETPPISPYLKQDVKAEPKPLFKHTTSTEIKQEPVPQPDFSLQSPLATEQQRGAKVSRQEPVLNGHVPPLGQSHAAMVAQ KALEQEKHAQSTTVPTQTALFDEDAYLENTESEDEYAEETVDEGLDEPRDVLVLHVVAKEGQQLNGAELLPCFLTLNFKY GDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNFSIMLNSARQLADDIDAVVLD GQRQPWGEFTKQDYLHRIRANA
Sequences:
>Translated_342_residues MEDLQLVLFILGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKQQADKESPPKRVDADGFDADGIGAVRVRKVGESNP HETPPISPYLKQDVKAEPKPLFKHTTSTEIKQEPVPQPDFSLQSPLATEQQRGAKVSRQEPVLNGHVPPLGQSHAAMVAQ KALEQEKHAQSTTVPTQTALFDEDAYLENTESEDEYAEETVDEGLDEPRDVLVLHVVAKEGQQLNGAELLPCFLTLNFKY GDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNFSIMLNSARQLADDIDAVVLD GQRQPWGEFTKQDYLHRIRANA >Mature_342_residues MEDLQLVLFILGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKQQADKESPPKRVDADGFDADGIGAVRVRKVGESNP HETPPISPYLKQDVKAEPKPLFKHTTSTEIKQEPVPQPDFSLQSPLATEQQRGAKVSRQEPVLNGHVPPLGQSHAAMVAQ KALEQEKHAQSTTVPTQTALFDEDAYLENTESEDEYAEETVDEGLDEPRDVLVLHVVAKEGQQLNGAELLPCFLTLNFKY GDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNFSIMLNSARQLADDIDAVVLD GQRQPWGEFTKQDYLHRIRANA
Specific function: Interacts directly with the cell division protein FtsZ. Probable receptor for the septal ring structure, may anchor it to the inner-membrane [H]
COG id: COG3115
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZipA family [H]
Homologues:
Organism=Escherichia coli, GI1788752, Length=341, Percent_Identity=34.3108504398827, Blast_Score=145, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011919 - InterPro: IPR007449 - ProDom: PD035754 [H]
Pfam domain/function: PF04354 ZipA_C [H]
EC number: NA
Molecular weight: Translated: 38094; Mature: 38094
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDLQLVLFILGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKQQADKESPPKRVDAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC GFDADGIGAVRVRKVGESNPHETPPISPYLKQDVKAEPKPLFKHTTSTEIKQEPVPQPDF CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCHHHCCCCCCCCC SLQSPLATEQQRGAKVSRQEPVLNGHVPPLGQSHAAMVAQKALEQEKHAQSTTVPTQTAL CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH FDEDAYLENTESEDEYAEETVDEGLDEPRDVLVLHVVAKEGQQLNGAELLPCFLTLNFKY CCCCHHCCCCCCHHHHHHHHHHHCCCCCHHEEEEEEEHHCCCCCCCCCEEEEEEEEEEEE GDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNF CCHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHH SIMLNSARQLADDIDAVVLDGQRQPWGEFTKQDYLHRIRANA HHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEDLQLVLFILGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKQQADKESPPKRVDAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC GFDADGIGAVRVRKVGESNPHETPPISPYLKQDVKAEPKPLFKHTTSTEIKQEPVPQPDF CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCHHHCCCCCCCCC SLQSPLATEQQRGAKVSRQEPVLNGHVPPLGQSHAAMVAQKALEQEKHAQSTTVPTQTAL CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH FDEDAYLENTESEDEYAEETVDEGLDEPRDVLVLHVVAKEGQQLNGAELLPCFLTLNFKY CCCCHHCCCCCCHHHHHHHHHHHCCCCCHHEEEEEEEHHCCCCCCCCCEEEEEEEEEEEE GDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNF CCHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHH SIMLNSARQLADDIDAVVLDGQRQPWGEFTKQDYLHRIRANA HHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA