Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is iorB [H]

Identifier: 120598401

GI number: 120598401

Start: 1806625

End: 1808871

Strand: Direct

Name: iorB [H]

Synonym: Sputw3181_1584

Alternate gene names: 120598401

Gene position: 1806625-1808871 (Clockwise)

Preceding gene: 120598400

Following gene: 120598402

Centisome position: 38.37

GC content: 50.42

Gene sequence:

>2247_bases
ATGAGTACTTTTACTGCCGTAGAAAATTTAAGCCGCCGCGACGTGTTAAAACTGTTTGGCGCAGTAGGGGGCGGACTTGC
ATTAGGGGCGAGTGGACTAACTTGGAGCCCCATGGCGCTGGCACAGAATAAAGAAGCGCGGCTGAATCTATTTATTGCCA
TAGGTGAGGATAACAAAGTGTACCTCACTTGCCATCGCTCCGAGATGGGACAGGGGATCAGAACGGGTATTCTGCAAGTC
TTAGCCGAAGAGTTAGAAGCGGATTGGGATAAAATCGTCCCAGTACAGGGGCTAGGCGATAAGCGTTATGGCAGCCAGAA
TACCGATGGTAGCCGCAGTATTCGCGATAATTTTGATCGTATGCGCCAGATGGGGGCGATGGCAAGAACCATGCTAGAGC
AAGCCGCAGCCGCGCGCTGGAAAGTCCCCGTGAGCGAGGTGCATACCGCCAGCCATAAAGTGCTGCATGCTAAAACGGGC
CGCTCGGCCAAGTTTGGCGAGTTAGCGTTAGCGGCATCAGCGCTGCCAGTACCTGCCGTTGAGTCATTAACCTTTAAAGA
GATTAAAGATTTCAAGCAGATTGGCGCATCCCGCCAAATCGTTGATATGGATGCCATGTTAAGCGGTAGCGCAATTTATG
GTTACGATATCAAACTCGACGGCATGCTCTACGCCAGCATCATGCGTCCGCCCGTGCTTGGGAGCGATGTTGCAAGTTTG
GATGATACCGCAGCGCGCAACGTGGCCGGAGTCGTGGATGTGTATCGTTTGCCTATCCCTAAGGGCGCCCCCGGGTTTCA
GGCTTTGGGCGGTGTGGCGGTTATCGCTACCAACACTTGGAGTGCCTTTGAAGGCCGTAAAGCATTAAATATCACTTGGA
CTCAGGTCGACAACAGTCAGCACGATTCGACACTTTATTTAAAGGCGTTAGTCGAGCGAGTACAGCAAGGCGGTAAAGTG
GTGCGTCAAGTTGGTGATGAGGTCAAAAATTGGCCCGAAGCGAATACATTAAAGGCGGTTTATACCGTGCCCTACTTAAT
TCATTCACCAATGGAACCGCCAGTTGCAACGGCCAATGTGACGGCAAAGGAATGTGAAGTTTGGGCTTCAACTCAAAACC
CACAAAGCACTCAACAAAGCGTGGCCGCAGCACTGGGGATTGAAGAGGATACCGTAAAAGTTCACGTCACATTATTAGGT
GGTGGATTTGGACGAAAAGCAAAGCCTGATTTTAGTGTCGAAGCCGCGTTGTTATCAAAGCAGTTTAAGCGTCCAATTAA
GGTGAGTTGGAGCCGCGAGGATGAAATCCAAAACGGTTATTACCATGCTATCAGCGCCCAGTCCTATCAGGCGCTGTTCG
ATGCTAACAATAAACCGACTGCGCTTTTAGCTCGGACTGGATTCCCATCGATCAGTTCAACCTTTGCCGAAGGCGTCGAA
TATCCCTCTGACGGTGAGTTAGATTTAGGTTTTGTGGACGTACCCTTTGCTTTGCCGCACTTAAGATACGAAGCGGTAAA
AGCGCAGGCGCATAGCCGCATAGGTTGGATGCGCTCTGTGTGTAATATTCAGCATGGCTTTAGTGTCGGTAGCTTTGTCG
ATGAAATGGCTCACAGAGCTCAGATGTCTTGTCCCGATATGTGGCGCAGCTTACTTGGGCAATCAAGGCGTGAGACCTTT
GATAACCAAGGCTTTAAATATGGTAACTACGGTGAAGACTTAAATCGCCATCCGGTGGATATAGATCGTTATTTAAACGT
CATTAATGCCGTCGAACAGGCTCAAGCCAAGGCGCCTAAGGCGGGCAAACATCAGGGCTGGGGTTTTGCCGTGCACCGCA
GTTTTGTGAGTGTGGTCGCTGTGGCCATGCGGGTGGAAGTGAGTGAGGATAAACAGCTTAAGGTACTTAATGCCATCGCT
GCCATTGATGCGGGAACGGTGGTGAATCCTGATAGAGTGAAATCACAAACCGAAGGCGCAATTATCTTTGGTCTAAGCTT
GGCCTTGATGGGTGAAATCACATACAAAGAAGGCCAAGTGCTTCAATCAAATTTCCACGATTATCCTTTGCTGCGACTCC
CTCAAACTCCTGATATGGAGATTATCATTATCGAGTCCGATGCTGCGCCTGCAGGCGTGGGGGAGCCGGGTGTGCCGCCC
GTTGCTCCGAGTTTGACCAATGCAATTTTTGCGGCGACAGGACAGAGGATCCGCGATCTTCCCGTGAATAAGCGATTGCG
AGTTTAA

Upstream 100 bases:

>100_bases
GAACAAATCAACTCAGCCATGTCGGGTAATCTCTGCCGCTGTGGCACCTACCCACGCATTAAAGCGGCGCTGCAACACTA
TGCCAAACAGGAGGGCTAAT

Downstream 100 bases:

>100_bases
GCCAATGCTAAAGGGTTAACGGAAAGTGATTTGAATAAAAAAGCGCCTAATGAGCGCTTTTTTCGTTTTTTTACCACAAA
AAAATTGCTTGTTAGCGATT

Product: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 748; Mature: 747

Protein sequence:

>748_residues
MSTFTAVENLSRRDVLKLFGAVGGGLALGASGLTWSPMALAQNKEARLNLFIAIGEDNKVYLTCHRSEMGQGIRTGILQV
LAEELEADWDKIVPVQGLGDKRYGSQNTDGSRSIRDNFDRMRQMGAMARTMLEQAAAARWKVPVSEVHTASHKVLHAKTG
RSAKFGELALAASALPVPAVESLTFKEIKDFKQIGASRQIVDMDAMLSGSAIYGYDIKLDGMLYASIMRPPVLGSDVASL
DDTAARNVAGVVDVYRLPIPKGAPGFQALGGVAVIATNTWSAFEGRKALNITWTQVDNSQHDSTLYLKALVERVQQGGKV
VRQVGDEVKNWPEANTLKAVYTVPYLIHSPMEPPVATANVTAKECEVWASTQNPQSTQQSVAAALGIEEDTVKVHVTLLG
GGFGRKAKPDFSVEAALLSKQFKRPIKVSWSREDEIQNGYYHAISAQSYQALFDANNKPTALLARTGFPSISSTFAEGVE
YPSDGELDLGFVDVPFALPHLRYEAVKAQAHSRIGWMRSVCNIQHGFSVGSFVDEMAHRAQMSCPDMWRSLLGQSRRETF
DNQGFKYGNYGEDLNRHPVDIDRYLNVINAVEQAQAKAPKAGKHQGWGFAVHRSFVSVVAVAMRVEVSEDKQLKVLNAIA
AIDAGTVVNPDRVKSQTEGAIIFGLSLALMGEITYKEGQVLQSNFHDYPLLRLPQTPDMEIIIIESDAAPAGVGEPGVPP
VAPSLTNAIFAATGQRIRDLPVNKRLRV

Sequences:

>Translated_748_residues
MSTFTAVENLSRRDVLKLFGAVGGGLALGASGLTWSPMALAQNKEARLNLFIAIGEDNKVYLTCHRSEMGQGIRTGILQV
LAEELEADWDKIVPVQGLGDKRYGSQNTDGSRSIRDNFDRMRQMGAMARTMLEQAAAARWKVPVSEVHTASHKVLHAKTG
RSAKFGELALAASALPVPAVESLTFKEIKDFKQIGASRQIVDMDAMLSGSAIYGYDIKLDGMLYASIMRPPVLGSDVASL
DDTAARNVAGVVDVYRLPIPKGAPGFQALGGVAVIATNTWSAFEGRKALNITWTQVDNSQHDSTLYLKALVERVQQGGKV
VRQVGDEVKNWPEANTLKAVYTVPYLIHSPMEPPVATANVTAKECEVWASTQNPQSTQQSVAAALGIEEDTVKVHVTLLG
GGFGRKAKPDFSVEAALLSKQFKRPIKVSWSREDEIQNGYYHAISAQSYQALFDANNKPTALLARTGFPSISSTFAEGVE
YPSDGELDLGFVDVPFALPHLRYEAVKAQAHSRIGWMRSVCNIQHGFSVGSFVDEMAHRAQMSCPDMWRSLLGQSRRETF
DNQGFKYGNYGEDLNRHPVDIDRYLNVINAVEQAQAKAPKAGKHQGWGFAVHRSFVSVVAVAMRVEVSEDKQLKVLNAIA
AIDAGTVVNPDRVKSQTEGAIIFGLSLALMGEITYKEGQVLQSNFHDYPLLRLPQTPDMEIIIIESDAAPAGVGEPGVPP
VAPSLTNAIFAATGQRIRDLPVNKRLRV
>Mature_747_residues
STFTAVENLSRRDVLKLFGAVGGGLALGASGLTWSPMALAQNKEARLNLFIAIGEDNKVYLTCHRSEMGQGIRTGILQVL
AEELEADWDKIVPVQGLGDKRYGSQNTDGSRSIRDNFDRMRQMGAMARTMLEQAAAARWKVPVSEVHTASHKVLHAKTGR
SAKFGELALAASALPVPAVESLTFKEIKDFKQIGASRQIVDMDAMLSGSAIYGYDIKLDGMLYASIMRPPVLGSDVASLD
DTAARNVAGVVDVYRLPIPKGAPGFQALGGVAVIATNTWSAFEGRKALNITWTQVDNSQHDSTLYLKALVERVQQGGKVV
RQVGDEVKNWPEANTLKAVYTVPYLIHSPMEPPVATANVTAKECEVWASTQNPQSTQQSVAAALGIEEDTVKVHVTLLGG
GFGRKAKPDFSVEAALLSKQFKRPIKVSWSREDEIQNGYYHAISAQSYQALFDANNKPTALLARTGFPSISSTFAEGVEY
PSDGELDLGFVDVPFALPHLRYEAVKAQAHSRIGWMRSVCNIQHGFSVGSFVDEMAHRAQMSCPDMWRSLLGQSRRETFD
NQGFKYGNYGEDLNRHPVDIDRYLNVINAVEQAQAKAPKAGKHQGWGFAVHRSFVSVVAVAMRVEVSEDKQLKVLNAIAA
IDAGTVVNPDRVKSQTEGAIIFGLSLALMGEITYKEGQVLQSNFHDYPLLRLPQTPDMEIIIIESDAAPAGVGEPGVPPV
APSLTNAIFAATGQRIRDLPVNKRLRV

Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274
- InterPro:   IPR012368
- InterPro:   IPR006311 [H]

Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.3.99.16 [H]

Molecular weight: Translated: 81402; Mature: 81270

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFTAVENLSRRDVLKLFGAVGGGLALGASGLTWSPMALAQNKEARLNLFIAIGEDNKV
CCCHHHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCEE
YLTCHRSEMGQGIRTGILQVLAEELEADWDKIVPVQGLGDKRYGSQNTDGSRSIRDNFDR
EEEEECHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
MRQMGAMARTMLEQAAAARWKVPVSEVHTASHKVLHAKTGRSAKFGELALAASALPVPAV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHCCCCCCCH
ESLTFKEIKDFKQIGASRQIVDMDAMLSGSAIYGYDIKLDGMLYASIMRPPVLGSDVASL
HHHHHHHHHHHHHCCCCCEEEEHHHHHCCCEEEEEEEEECCCHHHHHHCCCCCCCCHHHC
DDTAARNVAGVVDVYRLPIPKGAPGFQALGGVAVIATNTWSAFEGRKALNITWTQVDNSQ
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEEECCCCHHCCCEEEEEEEEECCCCC
HDSTLYLKALVERVQQGGKVVRQVGDEVKNWPEANTLKAVYTVPYLIHSPMEPPVATANV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCC
TAKECEVWASTQNPQSTQQSVAAALGIEEDTVKVHVTLLGGGFGRKAKPDFSVEAALLSK
CHHHHHEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHH
QFKRPIKVSWSREDEIQNGYYHAISAQSYQALFDANNKPTALLARTGFPSISSTFAEGVE
HHCCCEEEECCCCHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCC
YPSDGELDLGFVDVPFALPHLRYEAVKAQAHSRIGWMRSVCNIQHGFSVGSFVDEMAHRA
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QMSCPDMWRSLLGQSRRETFDNQGFKYGNYGEDLNRHPVDIDRYLNVINAVEQAQAKAPK
CCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
AGKHQGWGFAVHRSFVSVVAVAMRVEVSEDKQLKVLNAIAAIDAGTVVNPDRVKSQTEGA
CCCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCE
IIFGLSLALMGEITYKEGQVLQSNFHDYPLLRLPQTPDMEIIIIESDAAPAGVGEPGVPP
EEEEEHHHHHHHEECCCCHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCC
VAPSLTNAIFAATGQRIRDLPVNKRLRV
CCHHHHHHHHHHCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
STFTAVENLSRRDVLKLFGAVGGGLALGASGLTWSPMALAQNKEARLNLFIAIGEDNKV
CCHHHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCEE
YLTCHRSEMGQGIRTGILQVLAEELEADWDKIVPVQGLGDKRYGSQNTDGSRSIRDNFDR
EEEEECHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
MRQMGAMARTMLEQAAAARWKVPVSEVHTASHKVLHAKTGRSAKFGELALAASALPVPAV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHCCCCCCCH
ESLTFKEIKDFKQIGASRQIVDMDAMLSGSAIYGYDIKLDGMLYASIMRPPVLGSDVASL
HHHHHHHHHHHHHCCCCCEEEEHHHHHCCCEEEEEEEEECCCHHHHHHCCCCCCCCHHHC
DDTAARNVAGVVDVYRLPIPKGAPGFQALGGVAVIATNTWSAFEGRKALNITWTQVDNSQ
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEEECCCCHHCCCEEEEEEEEECCCCC
HDSTLYLKALVERVQQGGKVVRQVGDEVKNWPEANTLKAVYTVPYLIHSPMEPPVATANV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCC
TAKECEVWASTQNPQSTQQSVAAALGIEEDTVKVHVTLLGGGFGRKAKPDFSVEAALLSK
CHHHHHEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHH
QFKRPIKVSWSREDEIQNGYYHAISAQSYQALFDANNKPTALLARTGFPSISSTFAEGVE
HHCCCEEEECCCCHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCC
YPSDGELDLGFVDVPFALPHLRYEAVKAQAHSRIGWMRSVCNIQHGFSVGSFVDEMAHRA
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QMSCPDMWRSLLGQSRRETFDNQGFKYGNYGEDLNRHPVDIDRYLNVINAVEQAQAKAPK
CCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
AGKHQGWGFAVHRSFVSVVAVAMRVEVSEDKQLKVLNAIAAIDAGTVVNPDRVKSQTEGA
CCCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCE
IIFGLSLALMGEITYKEGQVLQSNFHDYPLLRLPQTPDMEIIIIESDAAPAGVGEPGVPP
EEEEEHHHHHHHEECCCCHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCC
VAPSLTNAIFAATGQRIRDLPVNKRLRV
CCHHHHHHHHHHCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7782304; 8157655 [H]