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The map label for this gene is ycdZ [H]

Identifier: 120598402

GI number: 120598402

Start: 1809258

End: 1809749

Strand: Direct

Name: ycdZ [H]

Synonym: Sputw3181_1585

Alternate gene names: 120598402

Gene position: 1809258-1809749 (Clockwise)

Preceding gene: 120598401

Following gene: 120598403

Centisome position: 38.43

GC content: 48.17

Gene sequence:

>492_bases
ATGGAAAATCGTTGGCAAGTCGCCATTTCTGCCGGCCTATTGGCCGCTATTTGGTGTGGTGTCGCTGATGCCTTTCATCT
GGTCACTTGGATCGGTTTTTTAGGTTGTAGCACGTTTTTCGCTCAACCTAAGGCCGGTTTTCAAGGGGTGATGATGGCGT
GGTGTACAAATCTGTCCGGTGTATTTTGGGCTTGGCTCATTATCTCGGGTAGCAGCTTTTTTGTTTCGCCTGTCTTTGGG
TATATTTTTACCGGCATCGCTACTTCGGCTATGTGTTTACAGGCAAGTTATCAGAAACTCAGCTTTATCCCCGGTGCCTT
TATTGGCTGTTGTATCACTTTTGCCATGGCAGGAGATATCGCCAATATTTTGCCGCCTTTAATCATTGGTGGGCTTTTGG
GGTGGGGTATGAGTATGCTAACCGAACAATTGGTCGCACTGACCCCAAAATGGTCTGCCCCAACGGGTACTGAAATGACC
CGTGTCGACTAG

Upstream 100 bases:

>100_bases
GACATGGAAGTGAAGGGCGCTATAACACCATAACTCAGCCGCACCTTGAGAACATTTGAATCATTAACTTCCGTGAATAG
AATTACTAAAGGGGTCATCC

Downstream 100 bases:

>100_bases
CTTGGTATTAGTTTGTATCAGTCATCTCCATTGCGCTGCATCAGCAGGTTTAAAATAGGGGGCTAAGATATGAACTATAA
TGCTGACTTAGTGCCAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MENRWQVAISAGLLAAIWCGVADAFHLVTWIGFLGCSTFFAQPKAGFQGVMMAWCTNLSGVFWAWLIISGSSFFVSPVFG
YIFTGIATSAMCLQASYQKLSFIPGAFIGCCITFAMAGDIANILPPLIIGGLLGWGMSMLTEQLVALTPKWSAPTGTEMT
RVD

Sequences:

>Translated_163_residues
MENRWQVAISAGLLAAIWCGVADAFHLVTWIGFLGCSTFFAQPKAGFQGVMMAWCTNLSGVFWAWLIISGSSFFVSPVFG
YIFTGIATSAMCLQASYQKLSFIPGAFIGCCITFAMAGDIANILPPLIIGGLLGWGMSMLTEQLVALTPKWSAPTGTEMT
RVD
>Mature_163_residues
MENRWQVAISAGLLAAIWCGVADAFHLVTWIGFLGCSTFFAQPKAGFQGVMMAWCTNLSGVFWAWLIISGSSFFVSPVFG
YIFTGIATSAMCLQASYQKLSFIPGAFIGCCITFAMAGDIANILPPLIIGGLLGWGMSMLTEQLVALTPKWSAPTGTEMT
RVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahC [H]

Homologues:

Organism=Escherichia coli, GI87081825, Length=139, Percent_Identity=43.8848920863309, Blast_Score=109, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 17482; Mature: 17482

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRWQVAISAGLLAAIWCGVADAFHLVTWIGFLGCSTFFAQPKAGFQGVMMAWCTNLSG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
VFWAWLIISGSSFFVSPVFGYIFTGIATSAMCLQASYQKLSFIPGAFIGCCITFAMAGDI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ANILPPLIIGGLLGWGMSMLTEQLVALTPKWSAPTGTEMTRVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MENRWQVAISAGLLAAIWCGVADAFHLVTWIGFLGCSTFFAQPKAGFQGVMMAWCTNLSG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
VFWAWLIISGSSFFVSPVFGYIFTGIATSAMCLQASYQKLSFIPGAFIGCCITFAMAGDI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ANILPPLIIGGLLGWGMSMLTEQLVALTPKWSAPTGTEMTRVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 9457880 [H]