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The map label for this gene is ycbL [H]

Identifier: 120598397

GI number: 120598397

Start: 1803540

End: 1804184

Strand: Direct

Name: ycbL [H]

Synonym: Sputw3181_1580

Alternate gene names: 120598397

Gene position: 1803540-1804184 (Clockwise)

Preceding gene: 120598395

Following gene: 120598398

Centisome position: 38.3

GC content: 44.5

Gene sequence:

>645_bases
ATGAAGTATCAAATTATTCCAGTGACACCTTTCCAGCAAAATTGCAGTTTAATCTGGTGTGAAAAAACTAAACTCGCTGC
TGTCGTGGATCCCGGTGGAAACATAGATCGTATTCAAGCCGAGGTAGCAAAACGCGGGTTGACTCTTGAGAAAATCCTGC
TCACCCATGGGCATATTGACCATGTCGGTGGGGCTAAGTCTCTTGCTCAATCAGCTAATATTCCGATTATTGGTCCGCAT
ATCGCCGATAAGTTTTGGATTGATAACTTACCTAAGCAAAGCCAAAATTTCGGATTTCCCCATTGCGATGCTTTTGAACC
GGCACAATATCTGCAGGATGGCGATATTGTTAAAGTGGGCGAGCAAAGTTTATCTGTGCTGCATTGCCCTGGGCATACGC
CTGGCCATATTGCCTTTTATTCGGCCCAATCTAAGTTGGCGTGGGTGGGGGATATTTTATTTAGAAGCTCTATCGGCCGC
ACTGATTTCCCCCAATCAAATCATCAGGATTTAATTCACTCGATCACCGAAAAACTTTGGCCTCTTGGTGCTGATGTAGA
ATTTATTCCGGGCCATGGTCCTTTATCGACCTTTGGCGAGGAACGTGAGCATAATCCTTTTGTTGCGGATCAATTATTAC
TTTAG

Upstream 100 bases:

>100_bases
TGTTGGCTTTTGGTTAAGATCAATTTTTATTATAAAAAATTGAGCCAAGATAAAGGACTTAGCGTAATCTATCGCTTATG
GATAACACGAGATTGAAGCT

Downstream 100 bases:

>100_bases
TGGTTTTCGTTGGTATATCTAAAAGTTGCGAGTGGCAACCACTCGCATACGTCTTTATGTCTTTTTAACGTCATCTTCAC
CTTTTACTCCTTCTGCAATC

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKYQIIPVTPFQQNCSLIWCEKTKLAAVVDPGGNIDRIQAEVAKRGLTLEKILLTHGHIDHVGGAKSLAQSANIPIIGPH
IADKFWIDNLPKQSQNFGFPHCDAFEPAQYLQDGDIVKVGEQSLSVLHCPGHTPGHIAFYSAQSKLAWVGDILFRSSIGR
TDFPQSNHQDLIHSITEKLWPLGADVEFIPGHGPLSTFGEEREHNPFVADQLLL

Sequences:

>Translated_214_residues
MKYQIIPVTPFQQNCSLIWCEKTKLAAVVDPGGNIDRIQAEVAKRGLTLEKILLTHGHIDHVGGAKSLAQSANIPIIGPH
IADKFWIDNLPKQSQNFGFPHCDAFEPAQYLQDGDIVKVGEQSLSVLHCPGHTPGHIAFYSAQSKLAWVGDILFRSSIGR
TDFPQSNHQDLIHSITEKLWPLGADVEFIPGHGPLSTFGEEREHNPFVADQLLL
>Mature_214_residues
MKYQIIPVTPFQQNCSLIWCEKTKLAAVVDPGGNIDRIQAEVAKRGLTLEKILLTHGHIDHVGGAKSLAQSANIPIIGPH
IADKFWIDNLPKQSQNFGFPHCDAFEPAQYLQDGDIVKVGEQSLSVLHCPGHTPGHIAFYSAQSKLAWVGDILFRSSIGR
TDFPQSNHQDLIHSITEKLWPLGADVEFIPGHGPLSTFGEEREHNPFVADQLLL

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=7e-14,
Organism=Escherichia coli, GI1787158, Length=212, Percent_Identity=56.1320754716981, Blast_Score=267, Evalue=4e-73,
Organism=Caenorhabditis elegans, GI17538952, Length=197, Percent_Identity=30.9644670050761, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23626; Mature: 23626

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYQIIPVTPFQQNCSLIWCEKTKLAAVVDPGGNIDRIQAEVAKRGLTLEKILLTHGHID
CCEEEEECCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCCC
HVGGAKSLAQSANIPIIGPHIADKFWIDNLPKQSQNFGFPHCDAFEPAQYLQDGDIVKVG
CCCCHHHHHHHCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEC
EQSLSVLHCPGHTPGHIAFYSAQSKLAWVGDILFRSSIGRTDFPQSNHQDLIHSITEKLW
CCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
PLGADVEFIPGHGPLSTFGEEREHNPFVADQLLL
CCCCCEEEECCCCCHHHHCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MKYQIIPVTPFQQNCSLIWCEKTKLAAVVDPGGNIDRIQAEVAKRGLTLEKILLTHGHID
CCEEEEECCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCCC
HVGGAKSLAQSANIPIIGPHIADKFWIDNLPKQSQNFGFPHCDAFEPAQYLQDGDIVKVG
CCCCHHHHHHHCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEC
EQSLSVLHCPGHTPGHIAFYSAQSKLAWVGDILFRSSIGRTDFPQSNHQDLIHSITEKLW
CCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
PLGADVEFIPGHGPLSTFGEEREHNPFVADQLLL
CCCCCEEEECCCCCHHHHCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]