Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is pucA [H]

Identifier: 120598398

GI number: 120598398

Start: 1804426

End: 1805442

Strand: Direct

Name: pucA [H]

Synonym: Sputw3181_1581

Alternate gene names: 120598398

Gene position: 1804426-1805442 (Clockwise)

Preceding gene: 120598397

Following gene: 120598399

Centisome position: 38.32

GC content: 47.3

Gene sequence:

>1017_bases
ATGGATCACCAAATCGAAGATTTACTTGAACATTGGTTACCACTTGCGGATGACGCTTGGGTGCTTGCTGTTATCACTCA
TGTTCAAGGTTCCGCTTACCGTAAACCTGGCGCCATGATGCTGTTCCATGAGTTTGGCCAAGGGGCGGGCATTTTAAGTG
GTGGATGTTTAGAAGCGGATTTGCGCCGATATGCTCAAAATGCGATGCAGACGAAGCAAGTGATGTGTGTCACCTATGAT
GCGAGTGATGAGTCTGATGCCAGTTATCGACTAGGCTGTGGCGGCATAGTCGATATCATGTTGATCCCGCTTTTAAAAGA
AAATCATGATCTAGGTTTGATTGACCTTGTTCATGCATTTCGTCATGGGCAATCGGGATATTATCAATTGCCTTTAGTCG
CATCTGGAACTGATGCGCGGCAGTATCAAGCACGTTTCTATTCCGCAGATGCTGCGCCATTTCCGATAAGCGATTTTGCT
AAATCAAAGATTGTGAAACAAGAGTCAAATGACACCCTAGTTATTCCCCTGAGGCCCCGATTCCATATTGGGATTTTTGG
TGGCGGTATTGATGCTAAACCTATCGCTGCGATTGCCCATTCATTAGGCTGGCAAGTTACCGTTATCGATGGCCGTACTG
CTTACGCTAGAGCGGCAGATTTTCCCCATGCTCATATCATCAAACAAGCCGTGGGTGAACTTGCTGCCAATGTTATCGCT
CAACTAGACTGCGCTGTGGTGATAAACCATAACCTGGGCTTAGATGCTGCAGTATTAAAGGCTATTCAACCTTATTCACT
GGATTATGTGGCATTGCTTGGGCCTGCCCACCGGCGGGATAAAGTACTGGCGATGGCAGGTTTATCTGCACAATCGTTTT
CTGGGGTGTTTTCGGCCCCCGCGGGTCTGGCGCTTGGCGGTGAGTTACCGAGCGCCATTGCTTTAAGTATTTTAGCTCAA
TGTCACGGTGTGCTACATGGAGCAACACTGAAACAACTTGATGAGATTATGGGTTAA

Upstream 100 bases:

>100_bases
CGTATCGATTTTTTAATCTATTGGGGTTACCTAATAATTAACAGTCGTTTGGTTTATGTTTTTTGCGCTTGATAATCCTA
ACCTCTTGGAGTCATTACGG

Downstream 100 bases:

>100_bases
TGACACCTGTGAGGTTACTGGATAAACGGCTTCTTATCGTGGTCCTTGCGGCAGGTGAAAGTCAGCGTTTTGAAGGGGTT
AAGTTAGCGCAGCTTCTACC

Product: hypothetical protein

Products: NA

Alternate protein names: XDHase subunit A [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MDHQIEDLLEHWLPLADDAWVLAVITHVQGSAYRKPGAMMLFHEFGQGAGILSGGCLEADLRRYAQNAMQTKQVMCVTYD
ASDESDASYRLGCGGIVDIMLIPLLKENHDLGLIDLVHAFRHGQSGYYQLPLVASGTDARQYQARFYSADAAPFPISDFA
KSKIVKQESNDTLVIPLRPRFHIGIFGGGIDAKPIAAIAHSLGWQVTVIDGRTAYARAADFPHAHIIKQAVGELAANVIA
QLDCAVVINHNLGLDAAVLKAIQPYSLDYVALLGPAHRRDKVLAMAGLSAQSFSGVFSAPAGLALGGELPSAIALSILAQ
CHGVLHGATLKQLDEIMG

Sequences:

>Translated_338_residues
MDHQIEDLLEHWLPLADDAWVLAVITHVQGSAYRKPGAMMLFHEFGQGAGILSGGCLEADLRRYAQNAMQTKQVMCVTYD
ASDESDASYRLGCGGIVDIMLIPLLKENHDLGLIDLVHAFRHGQSGYYQLPLVASGTDARQYQARFYSADAAPFPISDFA
KSKIVKQESNDTLVIPLRPRFHIGIFGGGIDAKPIAAIAHSLGWQVTVIDGRTAYARAADFPHAHIIKQAVGELAANVIA
QLDCAVVINHNLGLDAAVLKAIQPYSLDYVALLGPAHRRDKVLAMAGLSAQSFSGVFSAPAGLALGGELPSAIALSILAQ
CHGVLHGATLKQLDEIMG
>Mature_338_residues
MDHQIEDLLEHWLPLADDAWVLAVITHVQGSAYRKPGAMMLFHEFGQGAGILSGGCLEADLRRYAQNAMQTKQVMCVTYD
ASDESDASYRLGCGGIVDIMLIPLLKENHDLGLIDLVHAFRHGQSGYYQLPLVASGTDARQYQARFYSADAAPFPISDFA
KSKIVKQESNDTLVIPLRPRFHIGIFGGGIDAKPIAAIAHSLGWQVTVIDGRTAYARAADFPHAHIIKQAVGELAANVIA
QLDCAVVINHNLGLDAAVLKAIQPYSLDYVALLGPAHRRDKVLAMAGLSAQSFSGVFSAPAGLALGGELPSAIALSILAQ
CHGVLHGATLKQLDEIMG

Specific function: Oxidizes hypoxanthine and xanthine to uric acid. PucA subunit could exert a molybdenum cofactor recruiting function [H]

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 36197; Mature: 36197

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHQIEDLLEHWLPLADDAWVLAVITHVQGSAYRKPGAMMLFHEFGQGAGILSGGCLEAD
CCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEHHCCCCCCCCCCCHHHH
LRRYAQNAMQTKQVMCVTYDASDESDASYRLGCGGIVDIMLIPLLKENHDLGLIDLVHAF
HHHHHHHHHHCCEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHH
RHGQSGYYQLPLVASGTDARQYQARFYSADAAPFPISDFAKSKIVKQESNDTLVIPLRPR
HCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCC
FHIGIFGGGIDAKPIAAIAHSLGWQVTVIDGRTAYARAADFPHAHIIKQAVGELAANVIA
EEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
QLDCAVVINHNLGLDAAVLKAIQPYSLDYVALLGPAHRRDKVLAMAGLSAQSFSGVFSAP
HCCEEEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCHHHCCCCCCCC
AGLALGGELPSAIALSILAQCHGVLHGATLKQLDEIMG
CCCEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MDHQIEDLLEHWLPLADDAWVLAVITHVQGSAYRKPGAMMLFHEFGQGAGILSGGCLEAD
CCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEHHCCCCCCCCCCCHHHH
LRRYAQNAMQTKQVMCVTYDASDESDASYRLGCGGIVDIMLIPLLKENHDLGLIDLVHAF
HHHHHHHHHHCCEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHH
RHGQSGYYQLPLVASGTDARQYQARFYSADAAPFPISDFAKSKIVKQESNDTLVIPLRPR
HCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCC
FHIGIFGGGIDAKPIAAIAHSLGWQVTVIDGRTAYARAADFPHAHIIKQAVGELAANVIA
EEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
QLDCAVVINHNLGLDAAVLKAIQPYSLDYVALLGPAHRRDKVLAMAGLSAQSFSGVFSAP
HCCEEEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCHHHCCCCCCCC
AGLALGGELPSAIALSILAQCHGVLHGATLKQLDEIMG
CCCEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11344136 [H]