| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is rhlE [H]
Identifier: 120598331
GI number: 120598331
Start: 1719829
End: 1721112
Strand: Direct
Name: rhlE [H]
Synonym: Sputw3181_1513
Alternate gene names: 120598331
Gene position: 1719829-1721112 (Clockwise)
Preceding gene: 120598330
Following gene: 120598332
Centisome position: 36.53
GC content: 47.9
Gene sequence:
>1284_bases ATGACTCAGGCTTCTTCCTCCGTGGCAAGCTTTGCCCAACTCGGCATTATTGCACCCTTGCTAAATCGATTAACCGAATT AGCGTATGTTTCGCCCACACCAGTACAGGCGGCAACGATTCCCGCTGTGCTTGCGGGGCGCGATGTGTTAGCCGGTGCTA ATACGGGCTCGGGTAAAACGGCAGCCTTTGCCGTGCCGCTGTTGCAACAACTTGTTGACGCAAAAACAGAGGATAAGACA GGCGCTTATGTTCGTTGTTTGGTCTTAGTCCCAACCCGCGAATTAGCCCAGCAAGTCGCAGACAGCTTTTTATCCTATGC CTCACATCTTAATGGCAAGCTAAAAATTGTCGCTGCGTTTGGCGGTGTATCGGTGAATGCGCAAATGCAGAGCTTACGTT CTGGCGCCGACGTCCTAGTAGCAACGCCGGGTCGTTTGTTAGATCTGTTGTCGAGTAATGCCATCAAACTCAATCGTGTC AGCGCCTTAGTGCTAGATGAAGCTGACCGCATGTTAAGCCTTGGTTTTACTGAAGAATTAGCCCAAGTGCTCGACGCTTT GCCCGCCAAGAAACAAACCTTATTATTCTCAGCGACATTCCCTGAAGAAGTCCGTGAGTTAACGGCAAAACTGCTTAATA ATCCACTTGAATATCAATTGCAAAGTGAGCAAGAAAGCACGATTCATCAACGGGTGATTACGGTTAATCGTCCGATGAAA ACCGCATTATTGGCGCATCTGATTAAAGAACATCAGTGGTCACAGGCGTTGATTTTCGTGAGTGCCAAAAATACCTGTAA TCACTTAGCGCAAAAGCTGTCTAAACGTGGGATCACTGCTGAAGTGTTCCATGGCGATAAAGCCCAAGGTGCGCGTACGC GGGTGCTCGATGGCTTTAAAAATGGCGAGATCAGTGTGTTAATTGCGACCGATATTGCCGCCCGCGGTATCGATATCGAT AAACTGCCTGTGGTGATCAACTTTGATTTACCACGAAGCCCTGCAGATTATATGCATCGTATTGGCCGTAGTGGCCGCGC CGGTGAGGCAGGCTTAGCCGTGACCTTGATTTCCCATGAGGATTATCACCACTTTGGCGTGATAGAGAAAAAGAACAAAC TTAAGTTAGTGCGTGAGCAAATTGTCGGTTTTGAAGCCGATGATGACATGCCCGCCGAACTGTTAGAACAAGCTAAGCCT GTCGCCAAACCTGAAGGCACAGGTAAAAAAAAACGTAAACAGTTACCGCAAGCCAATGTTGAATTTTGGGGAAAAAAATC TTAA
Upstream 100 bases:
>100_bases TGAAACAGCAGTTGTTAACGCTGGAAACTGACAAGCACTGCCTCGATATTTAAGCTAGAATAGCCGCCTATTAAGATATT GGTGAGCAGTTAAACTTTCT
Downstream 100 bases:
>100_bases GTCGTTGGAAAAGCTACGATGAGCTAATCTCAACGTTAGTTGTTATCTCACTTGTGGGAGTTGTATGCAGCATTTATTCT GGTTGGTAGAAGGGCAGATC
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTQASSSVASFAQLGIIAPLLNRLTELAYVSPTPVQAATIPAVLAGRDVLAGANTGSGKTAAFAVPLLQQLVDAKTEDKT GAYVRCLVLVPTRELAQQVADSFLSYASHLNGKLKIVAAFGGVSVNAQMQSLRSGADVLVATPGRLLDLLSSNAIKLNRV SALVLDEADRMLSLGFTEELAQVLDALPAKKQTLLFSATFPEEVRELTAKLLNNPLEYQLQSEQESTIHQRVITVNRPMK TALLAHLIKEHQWSQALIFVSAKNTCNHLAQKLSKRGITAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARGIDID KLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEDYHHFGVIEKKNKLKLVREQIVGFEADDDMPAELLEQAKP VAKPEGTGKKKRKQLPQANVEFWGKKS
Sequences:
>Translated_427_residues MTQASSSVASFAQLGIIAPLLNRLTELAYVSPTPVQAATIPAVLAGRDVLAGANTGSGKTAAFAVPLLQQLVDAKTEDKT GAYVRCLVLVPTRELAQQVADSFLSYASHLNGKLKIVAAFGGVSVNAQMQSLRSGADVLVATPGRLLDLLSSNAIKLNRV SALVLDEADRMLSLGFTEELAQVLDALPAKKQTLLFSATFPEEVRELTAKLLNNPLEYQLQSEQESTIHQRVITVNRPMK TALLAHLIKEHQWSQALIFVSAKNTCNHLAQKLSKRGITAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARGIDID KLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEDYHHFGVIEKKNKLKLVREQIVGFEADDDMPAELLEQAKP VAKPEGTGKKKRKQLPQANVEFWGKKS >Mature_426_residues TQASSSVASFAQLGIIAPLLNRLTELAYVSPTPVQAATIPAVLAGRDVLAGANTGSGKTAAFAVPLLQQLVDAKTEDKTG AYVRCLVLVPTRELAQQVADSFLSYASHLNGKLKIVAAFGGVSVNAQMQSLRSGADVLVATPGRLLDLLSSNAIKLNRVS ALVLDEADRMLSLGFTEELAQVLDALPAKKQTLLFSATFPEEVRELTAKLLNNPLEYQLQSEQESTIHQRVITVNRPMKT ALLAHLIKEHQWSQALIFVSAKNTCNHLAQKLSKRGITAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARGIDIDK LPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEDYHHFGVIEKKNKLKLVREQIVGFEADDDMPAELLEQAKPV AKPEGTGKKKRKQLPQANVEFWGKKS
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=42.3684210526316, Blast_Score=265, Evalue=7e-71, Organism=Homo sapiens, GI41327773, Length=368, Percent_Identity=36.1413043478261, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI45446747, Length=362, Percent_Identity=38.3977900552486, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI45446743, Length=362, Percent_Identity=38.3977900552486, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=36.5853658536585, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI148613856, Length=357, Percent_Identity=36.1344537815126, Blast_Score=244, Evalue=9e-65, Organism=Homo sapiens, GI38201710, Length=357, Percent_Identity=36.1344537815126, Blast_Score=244, Evalue=9e-65, Organism=Homo sapiens, GI20149629, Length=412, Percent_Identity=34.7087378640777, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI4758138, Length=357, Percent_Identity=35.8543417366947, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI41327771, Length=387, Percent_Identity=34.3669250645995, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI262118318, Length=418, Percent_Identity=33.9712918660287, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI216548263, Length=371, Percent_Identity=35.0404312668464, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI262231852, Length=371, Percent_Identity=35.0404312668464, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI224593278, Length=359, Percent_Identity=37.0473537604457, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI13518015, Length=371, Percent_Identity=35.0404312668464, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI222352149, Length=399, Percent_Identity=32.5814536340852, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI7661920, Length=364, Percent_Identity=33.5164835164835, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI301171467, Length=379, Percent_Identity=36.9393139841689, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI87196351, Length=379, Percent_Identity=36.9393139841689, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI301171475, Length=379, Percent_Identity=36.9393139841689, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI169881239, Length=378, Percent_Identity=35.978835978836, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI13514809, Length=378, Percent_Identity=35.978835978836, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI21071032, Length=361, Percent_Identity=33.7950138504155, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI55749865, Length=349, Percent_Identity=35.243553008596, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI188035877, Length=377, Percent_Identity=34.2175066312997, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI50659095, Length=357, Percent_Identity=34.1736694677871, Blast_Score=217, Evalue=1e-56, Organism=Homo sapiens, GI13129006, Length=357, Percent_Identity=33.6134453781513, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI4503529, Length=367, Percent_Identity=35.149863760218, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI83700235, Length=358, Percent_Identity=35.7541899441341, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI164419743, Length=360, Percent_Identity=35.5555555555556, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI51094101, Length=360, Percent_Identity=35.5555555555556, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI21040371, Length=347, Percent_Identity=32.2766570605187, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI41327776, Length=410, Percent_Identity=31.7073170731707, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI4758112, Length=347, Percent_Identity=32.2766570605187, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI18375623, Length=347, Percent_Identity=32.2766570605187, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI38569503, Length=375, Percent_Identity=33.0666666666667, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI38327634, Length=351, Percent_Identity=32.7635327635328, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI38569505, Length=369, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI41327779, Length=381, Percent_Identity=31.758530183727, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI6005743, Length=377, Percent_Identity=32.6259946949602, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI8922886, Length=377, Percent_Identity=32.3607427055703, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI13514831, Length=360, Percent_Identity=32.7777777777778, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI256223453, Length=402, Percent_Identity=31.592039800995, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI62241022, Length=357, Percent_Identity=32.4929971988796, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI17505907, Length=443, Percent_Identity=31.8284424379233, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=31.6417910447761, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI62241024, Length=335, Percent_Identity=33.134328358209, Blast_Score=165, Evalue=6e-41, Organism=Homo sapiens, GI256773275, Length=388, Percent_Identity=34.5360824742268, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI164419732, Length=354, Percent_Identity=29.6610169491525, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI154759257, Length=396, Percent_Identity=30.3030303030303, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI9966805, Length=318, Percent_Identity=32.7044025157233, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=40.0921658986175, Blast_Score=126, Evalue=4e-29, Organism=Escherichia coli, GI1787016, Length=389, Percent_Identity=48.586118251928, Blast_Score=374, Evalue=1e-105, Organism=Escherichia coli, GI87082221, Length=369, Percent_Identity=41.1924119241192, Blast_Score=295, Evalue=5e-81, Organism=Escherichia coli, GI1787605, Length=371, Percent_Identity=40.7008086253369, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI1788930, Length=381, Percent_Identity=38.0577427821522, Blast_Score=229, Evalue=4e-61, Organism=Escherichia coli, GI1790214, Length=367, Percent_Identity=36.7847411444142, Blast_Score=225, Evalue=4e-60, Organism=Escherichia coli, GI48994977, Length=337, Percent_Identity=27.299703264095, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115533224, Length=352, Percent_Identity=38.9204545454545, Blast_Score=249, Evalue=3e-66, Organism=Caenorhabditis elegans, GI17555296, Length=419, Percent_Identity=35.3221957040573, Blast_Score=248, Evalue=3e-66, Organism=Caenorhabditis elegans, GI71987143, Length=365, Percent_Identity=35.6164383561644, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=37.5350140056022, Blast_Score=244, Evalue=7e-65, Organism=Caenorhabditis elegans, GI17510559, Length=406, Percent_Identity=34.2364532019704, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17552114, Length=367, Percent_Identity=34.6049046321526, Blast_Score=237, Evalue=8e-63, Organism=Caenorhabditis elegans, GI71995724, Length=372, Percent_Identity=33.6021505376344, Blast_Score=230, Evalue=9e-61, Organism=Caenorhabditis elegans, GI71995514, Length=373, Percent_Identity=36.7292225201072, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17510307, Length=373, Percent_Identity=36.7292225201072, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17510309, Length=373, Percent_Identity=36.7292225201072, Blast_Score=229, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17507121, Length=366, Percent_Identity=33.6065573770492, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI32565321, Length=384, Percent_Identity=34.1145833333333, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI17552642, Length=365, Percent_Identity=37.2602739726027, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI115532548, Length=382, Percent_Identity=33.5078534031414, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI115532546, Length=382, Percent_Identity=33.5078534031414, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17537549, Length=382, Percent_Identity=35.3403141361257, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI71995718, Length=375, Percent_Identity=36.5333333333333, Blast_Score=214, Evalue=5e-56, Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=31.5068493150685, Blast_Score=214, Evalue=7e-56, Organism=Caenorhabditis elegans, GI17507881, Length=379, Percent_Identity=34.8284960422164, Blast_Score=214, Evalue=7e-56, Organism=Caenorhabditis elegans, GI17507877, Length=376, Percent_Identity=34.5744680851064, Blast_Score=212, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507879, Length=377, Percent_Identity=33.1564986737401, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI71999646, Length=355, Percent_Identity=33.8028169014084, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI71999644, Length=355, Percent_Identity=33.8028169014084, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17507945, Length=362, Percent_Identity=33.9779005524862, Blast_Score=208, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17509811, Length=365, Percent_Identity=33.1506849315069, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71990816, Length=384, Percent_Identity=33.59375, Blast_Score=181, Evalue=5e-46, Organism=Caenorhabditis elegans, GI193208216, Length=389, Percent_Identity=30.8483290488432, Blast_Score=177, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17508543, Length=412, Percent_Identity=30.8252427184466, Blast_Score=176, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17505370, Length=351, Percent_Identity=34.4729344729345, Blast_Score=176, Evalue=1e-44, Organism=Caenorhabditis elegans, GI193206561, Length=357, Percent_Identity=29.6918767507003, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17556951, Length=373, Percent_Identity=30.5630026809651, Blast_Score=171, Evalue=9e-43, Organism=Caenorhabditis elegans, GI17536099, Length=400, Percent_Identity=30.75, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17536101, Length=400, Percent_Identity=30.75, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17536103, Length=400, Percent_Identity=30.75, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17553716, Length=380, Percent_Identity=28.1578947368421, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI25148203, Length=423, Percent_Identity=25.531914893617, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17507641, Length=387, Percent_Identity=28.9405684754522, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI25148291, Length=395, Percent_Identity=26.5822784810127, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI32564046, Length=378, Percent_Identity=29.3650793650794, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71997889, Length=462, Percent_Identity=29.004329004329, Blast_Score=138, Evalue=4e-33, Organism=Caenorhabditis elegans, GI71982862, Length=215, Percent_Identity=30.6976744186047, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25148205, Length=345, Percent_Identity=23.768115942029, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=41.2371134020619, Blast_Score=90, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=39.1666666666667, Blast_Score=250, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6321360, Length=348, Percent_Identity=39.367816091954, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6324217, Length=396, Percent_Identity=35.1010101010101, Blast_Score=246, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=36.9146005509642, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6321856, Length=384, Percent_Identity=34.8958333333333, Blast_Score=232, Evalue=8e-62, Organism=Saccharomyces cerevisiae, GI6325138, Length=358, Percent_Identity=37.7094972067039, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6324778, Length=365, Percent_Identity=37.5342465753425, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=374, Percent_Identity=32.620320855615, Blast_Score=221, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6321963, Length=389, Percent_Identity=35.4755784061697, Blast_Score=213, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6319714, Length=381, Percent_Identity=31.496062992126, Blast_Score=211, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=34.7945205479452, Blast_Score=210, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6320449, Length=371, Percent_Identity=34.5013477088949, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6320119, Length=370, Percent_Identity=32.4324324324324, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6321111, Length=361, Percent_Identity=33.5180055401662, Blast_Score=199, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6322912, Length=372, Percent_Identity=32.7956989247312, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=372, Percent_Identity=32.7956989247312, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=371, Percent_Identity=33.6927223719677, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6321267, Length=353, Percent_Identity=35.1274787535411, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=377, Percent_Identity=32.8912466843501, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6320400, Length=403, Percent_Identity=30.7692307692308, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=28.8135593220339, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=26.6990291262136, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320173, Length=215, Percent_Identity=39.0697674418605, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=432, Percent_Identity=28.4722222222222, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324366, Length=353, Percent_Identity=27.1954674220963, Blast_Score=126, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6321374, Length=241, Percent_Identity=26.9709543568465, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323844, Length=374, Percent_Identity=22.9946524064171, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24642151, Length=368, Percent_Identity=35.5978260869565, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI28574962, Length=365, Percent_Identity=35.8904109589041, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24583281, Length=362, Percent_Identity=37.5690607734807, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI24583279, Length=362, Percent_Identity=37.5690607734807, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI24662330, Length=396, Percent_Identity=37.3737373737374, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI21356161, Length=360, Percent_Identity=38.0555555555556, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24584399, Length=345, Percent_Identity=37.6811594202899, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI24585582, Length=409, Percent_Identity=34.4743276283619, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI17985987, Length=378, Percent_Identity=35.4497354497354, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI24644483, Length=367, Percent_Identity=32.9700272479564, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644487, Length=367, Percent_Identity=32.9700272479564, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI45551833, Length=367, Percent_Identity=32.9700272479564, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644485, Length=367, Percent_Identity=32.9700272479564, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI281361218, Length=367, Percent_Identity=32.9700272479564, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644481, Length=367, Percent_Identity=32.9700272479564, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644479, Length=367, Percent_Identity=32.9700272479564, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI18857967, Length=417, Percent_Identity=32.8537170263789, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI24645031, Length=366, Percent_Identity=33.3333333333333, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI17977678, Length=364, Percent_Identity=34.0659340659341, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24584994, Length=441, Percent_Identity=31.5192743764172, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI21355075, Length=361, Percent_Identity=33.5180055401662, Blast_Score=221, Evalue=6e-58, Organism=Drosophila melanogaster, GI28575014, Length=359, Percent_Identity=36.4902506963788, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI17136814, Length=380, Percent_Identity=34.2105263157895, Blast_Score=211, Evalue=8e-55, Organism=Drosophila melanogaster, GI24581954, Length=365, Percent_Identity=30.6849315068493, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24581952, Length=365, Percent_Identity=30.6849315068493, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24581956, Length=365, Percent_Identity=30.6849315068493, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI281365720, Length=322, Percent_Identity=34.472049689441, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24582080, Length=364, Percent_Identity=33.2417582417582, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24582078, Length=364, Percent_Identity=33.2417582417582, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI17136248, Length=364, Percent_Identity=33.2417582417582, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24582075, Length=364, Percent_Identity=33.2417582417582, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI17647335, Length=387, Percent_Identity=29.9741602067183, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI28571808, Length=364, Percent_Identity=30.4945054945055, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI28571809, Length=364, Percent_Identity=30.4945054945055, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24643725, Length=403, Percent_Identity=29.2803970223325, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI21355559, Length=374, Percent_Identity=36.096256684492, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24666101, Length=369, Percent_Identity=33.3333333333333, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI18859659, Length=426, Percent_Identity=30.9859154929577, Blast_Score=165, Evalue=4e-41, Organism=Drosophila melanogaster, GI28571338, Length=426, Percent_Identity=30.9859154929577, Blast_Score=165, Evalue=4e-41, Organism=Drosophila melanogaster, GI24642822, Length=383, Percent_Identity=30.0261096605744, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI24668515, Length=324, Percent_Identity=30.2469135802469, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI19920478, Length=362, Percent_Identity=30.939226519337, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI20130173, Length=445, Percent_Identity=26.2921348314607, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI17136666, Length=419, Percent_Identity=29.5942720763723, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24640164, Length=364, Percent_Identity=26.6483516483516, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24646066, Length=346, Percent_Identity=23.4104046242775, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 46257; Mature: 46126
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQASSSVASFAQLGIIAPLLNRLTELAYVSPTPVQAATIPAVLAGRDVLAGANTGSGKT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCH AAFAVPLLQQLVDAKTEDKTGAYVRCLVLVPTRELAQQVADSFLSYASHLNGKLKIVAAF HHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEE GGVSVNAQMQSLRSGADVLVATPGRLLDLLSSNAIKLNRVSALVLDEADRMLSLGFTEEL CCCEEHHHHHHHHCCCCEEEECCHHHHHHHCCCCEEEEHHHEEEHHHHHHHHHCCCHHHH AQVLDALPAKKQTLLFSATFPEEVRELTAKLLNNPLEYQLQSEQESTIHQRVITVNRPMK HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHCCCCCHH TALLAHLIKEHQWSQALIFVSAKNTCNHLAQKLSKRGITAEVFHGDKAQGARTRVLDGFK HHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCC NGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHE CCCEEEEEEECHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECC DYHHFGVIEKKNKLKLVREQIVGFEADDDMPAELLEQAKPVAKPEGTGKKKRKQLPQANV CCCCCCCEECCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCC EFWGKKS CCCCCCC >Mature Secondary Structure TQASSSVASFAQLGIIAPLLNRLTELAYVSPTPVQAATIPAVLAGRDVLAGANTGSGKT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCH AAFAVPLLQQLVDAKTEDKTGAYVRCLVLVPTRELAQQVADSFLSYASHLNGKLKIVAAF HHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEE GGVSVNAQMQSLRSGADVLVATPGRLLDLLSSNAIKLNRVSALVLDEADRMLSLGFTEEL CCCEEHHHHHHHHCCCCEEEECCHHHHHHHCCCCEEEEHHHEEEHHHHHHHHHCCCHHHH AQVLDALPAKKQTLLFSATFPEEVRELTAKLLNNPLEYQLQSEQESTIHQRVITVNRPMK HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHCCCCCHH TALLAHLIKEHQWSQALIFVSAKNTCNHLAQKLSKRGITAEVFHGDKAQGARTRVLDGFK HHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCC NGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHE CCCEEEEEEECHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECC DYHHFGVIEKKNKLKLVREQIVGFEADDDMPAELLEQAKPVAKPEGTGKKKRKQLPQANV CCCCCCCEECCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCC EFWGKKS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]