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The map label for this gene is 120598284

Identifier: 120598284

GI number: 120598284

Start: 1652826

End: 1653752

Strand: Direct

Name: 120598284

Synonym: Sputw3181_1462

Alternate gene names: NA

Gene position: 1652826-1653752 (Clockwise)

Preceding gene: 120598283

Following gene: 120598285

Centisome position: 35.1

GC content: 42.5

Gene sequence:

>927_bases
ATGCAAGACGACGAAATCGATCTTCGTGAGTTGTTTTCTGTTATTTGGCAAGGCAAATGGCGCATTATTGGCATAACCGC
TGTTTTTGCGATTGCCTCTGTTGGCTTAGCACTTTATTTACCCAATATCTATAAATCCGAAGCCTTATTAGCACCAGCAT
CAGAGGAACAGGGTGGCGGCTTAAGCGCTTTGGCATCGCAGTTTGGTGGTTTAGCGAGTCTTGCAGGAGTAAATCTCGGC
GGTAAAGGTGGTACTGATAAAACCCAGCTTGCGATTGAAGTATTAAAATCCCGCCAATTTACCAGTGAGTTTATTCAAAA
GCATAATATCCTCGCCGATTTAATGGCGGCAAAAAAATGGGATAGGGATGCAGATAAAATTATCTATGACCCTGAGTTAT
ACAACGAGCAAACCAATACTTGGGTACGCGATGTCGAACCACCAGTTAAACCTGAACCTTCGATGCAGGAGGCTTATAAA
GAGTTCAGCAAAATTATTGCGGTTAATAAAGATAAAGAGACTGCAATGGTGACAGTTTCAATTGAGCACTTATCGCCAAC
CGTCGCGCAGCAATGGGTCACTTGGTTAATTCAAGATATTAATAAAGTGATGAAGGAGCGCGATGTCGCAGAGGCCCATC
GCAGTACCGATTTTTTAAATAAGCAAATTGCTTTAACTAATGTCGCTGATATTAAAGCTGTACTTTATAAGCTAATTGAA
GAACAGGCAAAAACCATCATGTTTGCCGAAGTACGCGATGAATACGTATTTAAAACCATTGACCCCGCATTAGCGCCAGA
AGAGAAAGCCAAACCGAAACGCGCATTAATTTGCGTTTTAGGCACCATGCTCGGCGGCATGTTAGGTGTGATGTTAGTAC
TGGTAAGGCATTTTATGAGAAAAGAGCAGAAGCTAGCTAGAGCCTAG

Upstream 100 bases:

>100_bases
TTTCCTAGGGCCTAGCACCTAGGGCCTAGAACCTAAAAAAATGAATACACAAATTACTCAAAATCCAAACACATACCAAT
CCGACGCCAGGTTTCCACAA

Downstream 100 bases:

>100_bases
AACCTTGCTGTTATCTGTCATCCTCGCGCATGCGGGGATCCAGCTTTTTGCTTTAATCTGTGAGCTTTGCTCCTAAGCCG
TCATCCTCGCTCATGCGGCG

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Chain Length Determinant Protein; Lipopolysaccharide Biosynthesis; Chain Length Determinant Family Protein; OtnB Protein; O-Antigen Length Determinant Protein

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MQDDEIDLRELFSVIWQGKWRIIGITAVFAIASVGLALYLPNIYKSEALLAPASEEQGGGLSALASQFGGLASLAGVNLG
GKGGTDKTQLAIEVLKSRQFTSEFIQKHNILADLMAAKKWDRDADKIIYDPELYNEQTNTWVRDVEPPVKPEPSMQEAYK
EFSKIIAVNKDKETAMVTVSIEHLSPTVAQQWVTWLIQDINKVMKERDVAEAHRSTDFLNKQIALTNVADIKAVLYKLIE
EQAKTIMFAEVRDEYVFKTIDPALAPEEKAKPKRALICVLGTMLGGMLGVMLVLVRHFMRKEQKLARA

Sequences:

>Translated_308_residues
MQDDEIDLRELFSVIWQGKWRIIGITAVFAIASVGLALYLPNIYKSEALLAPASEEQGGGLSALASQFGGLASLAGVNLG
GKGGTDKTQLAIEVLKSRQFTSEFIQKHNILADLMAAKKWDRDADKIIYDPELYNEQTNTWVRDVEPPVKPEPSMQEAYK
EFSKIIAVNKDKETAMVTVSIEHLSPTVAQQWVTWLIQDINKVMKERDVAEAHRSTDFLNKQIALTNVADIKAVLYKLIE
EQAKTIMFAEVRDEYVFKTIDPALAPEEKAKPKRALICVLGTMLGGMLGVMLVLVRHFMRKEQKLARA
>Mature_308_residues
MQDDEIDLRELFSVIWQGKWRIIGITAVFAIASVGLALYLPNIYKSEALLAPASEEQGGGLSALASQFGGLASLAGVNLG
GKGGTDKTQLAIEVLKSRQFTSEFIQKHNILADLMAAKKWDRDADKIIYDPELYNEQTNTWVRDVEPPVKPEPSMQEAYK
EFSKIIAVNKDKETAMVTVSIEHLSPTVAQQWVTWLIQDINKVMKERDVAEAHRSTDFLNKQIALTNVADIKAVLYKLIE
EQAKTIMFAEVRDEYVFKTIDPALAPEEKAKPKRALICVLGTMLGGMLGVMLVLVRHFMRKEQKLARA

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34434; Mature: 34434

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDDEIDLRELFSVIWQGKWRIIGITAVFAIASVGLALYLPNIYKSEALLAPASEEQGGG
CCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHCCCCEECCCCCCCCCC
LSALASQFGGLASLAGVNLGGKGGTDKTQLAIEVLKSRQFTSEFIQKHNILADLMAAKKW
HHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRDADKIIYDPELYNEQTNTWVRDVEPPVKPEPSMQEAYKEFSKIIAVNKDKETAMVTVS
CCCCCCEEECHHHHCCHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEE
IEHLSPTVAQQWVTWLIQDINKVMKERDVAEAHRSTDFLNKQIALTNVADIKAVLYKLIE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAKTIMFAEVRDEYVFKTIDPALAPEEKAKPKRALICVLGTMLGGMLGVMLVLVRHFMR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQKLARA
HHHHHHCC
>Mature Secondary Structure
MQDDEIDLRELFSVIWQGKWRIIGITAVFAIASVGLALYLPNIYKSEALLAPASEEQGGG
CCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHCCCCEECCCCCCCCCC
LSALASQFGGLASLAGVNLGGKGGTDKTQLAIEVLKSRQFTSEFIQKHNILADLMAAKKW
HHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRDADKIIYDPELYNEQTNTWVRDVEPPVKPEPSMQEAYKEFSKIIAVNKDKETAMVTVS
CCCCCCEEECHHHHCCHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEE
IEHLSPTVAQQWVTWLIQDINKVMKERDVAEAHRSTDFLNKQIALTNVADIKAVLYKLIE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAKTIMFAEVRDEYVFKTIDPALAPEEKAKPKRALICVLGTMLGGMLGVMLVLVRHFMR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQKLARA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA