| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is cheB1 [H]
Identifier: 120598271
GI number: 120598271
Start: 1635261
End: 1636379
Strand: Direct
Name: cheB1 [H]
Synonym: Sputw3181_1448
Alternate gene names: 120598271
Gene position: 1635261-1636379 (Clockwise)
Preceding gene: 120598270
Following gene: 120598272
Centisome position: 34.73
GC content: 47.27
Gene sequence:
>1119_bases ATGGCCATTAAAGTATTAGTCGTTGATGACTCAAGTTTTTTTAGGCGACGTGTTAGTGAAATAGTCAATCAAGATCCTGA ACTGGAAGTAATTGCGACGGCCTCAAATGGGGCCGAAGCGGTAAAGATGGCTGCTGAACTTAATCCCCAAGTGATTACCA TGGATATTGAAATGCCCGTCATGGATGGTATTACTGCCGTCCGTGAGATCATGGCAAAGTGTCCAACACCCATATTAATG TTTTCATCTTTGACCCATGACGGTGCCAAAGCCACGTTAGATGCGTTAGATGCGGGTGCGTTAGATTTTTTACCTAAGCG CTTTGAAGATATTGCAACAAATAAAGATGATGCCATTCTTTTACTCCAGCAAAGAGTGAAAGCCCTTGGTCGCAGGAGAA TGTTTCGCCCGATAGTAAGACCTTCGGTGTTGCCAACGCCTACATCTCGAACGAGTACCACTTCTGTTCTGGGGAACACG ACGCCTGTTGCCACTGCGCCTATTCGGACATCCACAGCTTCGTCTATCCGTGCGAGTGGTAAACAATACAAATTACTGCT GATTGGCACTTCTACTGGCGGCCCAGTCGCATTGCAAAAGATTTTGACGCAGTTTCCAGCCAATTATCCTCACCCTATTT TACTCATTCAGCATATGCCGGCAGCCTTTACACCAGCTTTCGCGAATCGTCTAAATGGGTTATGTAAGATTGAAGTGAAA GAAGCTGCAAATGGTGATTTACTTCGACCAGGTTGTGCTTACTTAGCGCCGGGTGGCATGCAGATGATGATCGAACGCAG TGGTGCCAGTGGCCGAATCAAAGTCATCGCAGGGAGTGCTGAGATGAATTATAAGCCCTGCGTCGATATTACTTTTGCAT CAGCATCGAAAGCCTATGGTGGTGATGTACTTGCTGTTGTCTTGACGGGTATGGGAGCCGATGGTCGAGAAGGAGCGCGT ATGCTTAAATCGGCTGGAGCGACTATTTGGGCACAGGATGAAGCCAGTTGCGTGGTTTACGGCATGCCGCAGGCAGTTGC GAGTGCGGGAATTGCGAGCCAATCTATTTCACTCGACAATATGGCTGAGTCAATTTTAAAAGAGTCTGTTCGTGGCTAA
Upstream 100 bases:
>100_bases CGATCACCTCTGATGGCGGTATTGCTCTGATTTTAGATGTACCAGGGCTATTAAAGCATTATGCAAAGAATAAAAGTTAG TTTCCAAGCTAAGGAATGGA
Downstream 100 bases:
>100_bases TGTAACTAATGTCAAAAAGCCAATGAGCACGAATGTCGTGCTCATTATGGTATTAATGGTGATTACCATTATTTGTCTGG GCGCGTTAAGTCTCGACTAT
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MAIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPVMDGITAVREIMAKCPTPILM FSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDDAILLLQQRVKALGRRRMFRPIVRPSVLPTPTSRTSTTSVLGNT TPVATAPIRTSTASSIRASGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFANRLNGLCKIEVK EAANGDLLRPGCAYLAPGGMQMMIERSGASGRIKVIAGSAEMNYKPCVDITFASASKAYGGDVLAVVLTGMGADGREGAR MLKSAGATIWAQDEASCVVYGMPQAVASAGIASQSISLDNMAESILKESVRG
Sequences:
>Translated_372_residues MAIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPVMDGITAVREIMAKCPTPILM FSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDDAILLLQQRVKALGRRRMFRPIVRPSVLPTPTSRTSTTSVLGNT TPVATAPIRTSTASSIRASGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFANRLNGLCKIEVK EAANGDLLRPGCAYLAPGGMQMMIERSGASGRIKVIAGSAEMNYKPCVDITFASASKAYGGDVLAVVLTGMGADGREGAR MLKSAGATIWAQDEASCVVYGMPQAVASAGIASQSISLDNMAESILKESVRG >Mature_371_residues AIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPVMDGITAVREIMAKCPTPILMF SSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDDAILLLQQRVKALGRRRMFRPIVRPSVLPTPTSRTSTTSVLGNTT PVATAPIRTSTASSIRASGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFANRLNGLCKIEVKE AANGDLLRPGCAYLAPGGMQMMIERSGASGRIKVIAGSAEMNYKPCVDITFASASKAYGGDVLAVVLTGMGADGREGARM LKSAGATIWAQDEASCVVYGMPQAVASAGIASQSISLDNMAESILKESVRG
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=371, Percent_Identity=36.3881401617251, Blast_Score=233, Evalue=2e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 39424; Mature: 39293
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPV CEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCH MDGITAVREIMAKCPTPILMFSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDDAIL HHHHHHHHHHHHHCCCCEEEHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEH LLQQRVKALGRRRMFRPIVRPSVLPTPTSRTSTTSVLGNTTPVATAPIRTSTASSIRASG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEECCCCCCCHHHHHCCC KQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFANRLNGLCKIEVK CEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEEEEE EAANGDLLRPGCAYLAPGGMQMMIERSGASGRIKVIAGSAEMNYKPCVDITFASASKAYG CCCCCCCCCCCCHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCC GDVLAVVLTGMGADGREGARMLKSAGATIWAQDEASCVVYGMPQAVASAGIASQSISLDN CCEEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCEEEEECHHHHHHCCCCCCCCCHHH MAESILKESVRG HHHHHHHHHHCC >Mature Secondary Structure AIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPV EEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCH MDGITAVREIMAKCPTPILMFSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDDAIL HHHHHHHHHHHHHCCCCEEEHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEH LLQQRVKALGRRRMFRPIVRPSVLPTPTSRTSTTSVLGNTTPVATAPIRTSTASSIRASG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEECCCCCCCHHHHHCCC KQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFANRLNGLCKIEVK CEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEEEEE EAANGDLLRPGCAYLAPGGMQMMIERSGASGRIKVIAGSAEMNYKPCVDITFASASKAYG CCCCCCCCCCCCHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCC GDVLAVVLTGMGADGREGARMLKSAGATIWAQDEASCVVYGMPQAVASAGIASQSISLDN CCEEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCEEEEECHHHHHHCCCCCCCCCHHH MAESILKESVRG HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]