Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598272

Identifier: 120598272

GI number: 120598272

Start: 1636402

End: 1636836

Strand: Direct

Name: 120598272

Synonym: Sputw3181_1449

Alternate gene names: NA

Gene position: 1636402-1636836 (Clockwise)

Preceding gene: 120598271

Following gene: 120598273

Centisome position: 34.76

GC content: 42.07

Gene sequence:

>435_bases
ATGAGCACGAATGTCGTGCTCATTATGGTATTAATGGTGATTACCATTATTTGTCTGGGCGCGTTAAGTCTCGACTATCG
ACATAAAATCAAATTGTTGCATGAAGATGTAAAACGTCTCGAATCAACTCAAGTTTTACTTATGGTACCTGATGAGCAAG
CTGAAGCGATTGCAACATGGCTAGCGACTCATCCTGATCAGACTCAAGCTATGTTGAAATTAGCTTCACCGGGTGAGCAA
AAAGCAGTTACGGTAGACTTAAATGCAGAACCTTCGTCAATTAATTTGGCGTTACCACCTAAATCAACTGAACCGTCAAC
GGGTAAAGTAAATACTGACGTTGTGCCTGTAGTGGTGTCAGAGAATGCTGATGGCGTTAAAGTGATTAGCCTACCAAATG
GTGGGATAAGGGTAACAACAAGGGAAGGCGATTAG

Upstream 100 bases:

>100_bases
AGTGCGGGAATTGCGAGCCAATCTATTTCACTCGACAATATGGCTGAGTCAATTTTAAAAGAGTCTGTTCGTGGCTAATG
TAACTAATGTCAAAAAGCCA

Downstream 100 bases:

>100_bases
TCTTTTTCAATCGTGATTCAATGCATGTTTAAGTCGGAATAACGAGAGGATCACTTCTTGAAAGTATGGACCATAGCAAA
TCAAAAAGGCGGTGTGGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSTNVVLIMVLMVITIICLGALSLDYRHKIKLLHEDVKRLESTQVLLMVPDEQAEAIATWLATHPDQTQAMLKLASPGEQ
KAVTVDLNAEPSSINLALPPKSTEPSTGKVNTDVVPVVVSENADGVKVISLPNGGIRVTTREGD

Sequences:

>Translated_144_residues
MSTNVVLIMVLMVITIICLGALSLDYRHKIKLLHEDVKRLESTQVLLMVPDEQAEAIATWLATHPDQTQAMLKLASPGEQ
KAVTVDLNAEPSSINLALPPKSTEPSTGKVNTDVVPVVVSENADGVKVISLPNGGIRVTTREGD
>Mature_143_residues
STNVVLIMVLMVITIICLGALSLDYRHKIKLLHEDVKRLESTQVLLMVPDEQAEAIATWLATHPDQTQAMLKLASPGEQK
AVTVDLNAEPSSINLALPPKSTEPSTGKVNTDVVPVVVSENADGVKVISLPNGGIRVTTREGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15462; Mature: 15331

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNVVLIMVLMVITIICLGALSLDYRHKIKLLHEDVKRLESTQVLLMVPDEQAEAIATW
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
LATHPDQTQAMLKLASPGEQKAVTVDLNAEPSSINLALPPKSTEPSTGKVNTDVVPVVVS
HHCCCCHHHEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEE
ENADGVKVISLPNGGIRVTTREGD
CCCCCEEEEEECCCCEEEEEECCC
>Mature Secondary Structure 
STNVVLIMVLMVITIICLGALSLDYRHKIKLLHEDVKRLESTQVLLMVPDEQAEAIATW
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
LATHPDQTQAMLKLASPGEQKAVTVDLNAEPSSINLALPPKSTEPSTGKVNTDVVPVVVS
HHCCCCHHHEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEE
ENADGVKVISLPNGGIRVTTREGD
CCCCCEEEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA