Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is flhB

Identifier: 120598263

GI number: 120598263

Start: 1625515

End: 1626645

Strand: Direct

Name: flhB

Synonym: Sputw3181_1440

Alternate gene names: 120598263

Gene position: 1625515-1626645 (Clockwise)

Preceding gene: 120598262

Following gene: 120598264

Centisome position: 34.52

GC content: 44.39

Gene sequence:

>1131_bases
ATGGCTGAAGAGAGCAGCGGCGAACGTAGTGAGGAACCCACAGGGAGGCGCCTTGAACAGGCGCGTGAAAAAGGCCAAGT
TGCTCGTTCAAAAGAACTGGGGACTGCCGCGGTATTACTTTCCGCAGCAACGGGGTTTTATATGCTTGGCCCTGGTATCG
CAACGGCACTCTCCCATGTGTTTGAACGTGTTTTTACTATGGATCGCGCTCAAATTTATGATACTAACCAAATGTTTAAT
GTTTGGGGGTTGGTCGCGGGTGAAATTGCATGGCCAATGCTTAAAATCATGTTGCTGATTGTGGTGGTGGCTTTTATTGG
TAATGTGTCCCTCGGTGGGATGAACTTTTCAACCCAAGCTATGATGCCCAAAGCCAGTAAAATGAGTCCTCTTGCTGGTT
TTAAGCGTATGTTTGGGGTGCAAGCGCTCGTTGAGTTGACTAAGGGAATTGCTAAGTTCTCCGTAGTTGCTTTTTCGGCT
TACTTTCTTTTAAGTTACTATTTTAATGATATTTTATTGTTATCAAGTGATCACTTACCAGGGAATGTTCACCATGCGTT
AGATCTGTTGATATGGATGTTCATTTTACTCTGTTCTTCTGTGTTATTGATTGTGGTCATTGATGTGCCATTTCAGATTT
GGAATCACAATAAACAACTGAAAATGACCAAACAAGAAGTCAAAGATGAATATAAAGACACAGAAGGTAAGCCTGAAGTT
AAAGGACGCGTTCGACAAATGCAGCGAGAGCTTGCACAGCGTCGAATGATGGCCGAAGTACCCAATGCGGACGTGATTGT
CGTCAATCCTGAGCATTATGCCGTGGCGGTCAAATACGATGTCAAGCGCTCTGCTGCACCGTTTGTCATTGCCAAGGGTG
TAGATGATGTGGCGTTTAAGATCCGCGAAGTCGCCCGTGAGTACAATATTGCGATTGTGTCAGCTCCCCCATTGGCAAGG
GCAATCTATCATACGACTAAATTAGATCAGCAAATACCTGAGGGGTTATTTACTGCCGTGGCTCAGGTTTTAGCCTATGT
TTTCCAATTGCGTCAATACCAAAAGGGACGGGGACGTAAACCTATTCCTATCCCATTAAATCAGCCTATCCCTGATGATT
TAAAATATTAA

Upstream 100 bases:

>100_bases
ATTTTGACGAAGTATGGGCTGCAGCTCAGGTTTTGCTATGTGATATTTTGGGTCTTCAATGTCAAGCCGATGGCTTGATA
TAAGGTTATAGGAACTCAGT

Downstream 100 bases:

>100_bases
TGGCTTGCTCGTTCACTCTTCAAATTTTAAGTGTCCTCTTGGCGCGATTTTTGCTTTTCCGCTTTTATACGTCAAAGTTT
AGGTAATAGTGAATGGATGT

Product: flagellar biosynthesis protein FlhB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MAEESSGERSEEPTGRRLEQAREKGQVARSKELGTAAVLLSAATGFYMLGPGIATALSHVFERVFTMDRAQIYDTNQMFN
VWGLVAGEIAWPMLKIMLLIVVVAFIGNVSLGGMNFSTQAMMPKASKMSPLAGFKRMFGVQALVELTKGIAKFSVVAFSA
YFLLSYYFNDILLLSSDHLPGNVHHALDLLIWMFILLCSSVLLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEV
KGRVRQMQRELAQRRMMAEVPNADVIVVNPEHYAVAVKYDVKRSAAPFVIAKGVDDVAFKIREVAREYNIAIVSAPPLAR
AIYHTTKLDQQIPEGLFTAVAQVLAYVFQLRQYQKGRGRKPIPIPLNQPIPDDLKY

Sequences:

>Translated_376_residues
MAEESSGERSEEPTGRRLEQAREKGQVARSKELGTAAVLLSAATGFYMLGPGIATALSHVFERVFTMDRAQIYDTNQMFN
VWGLVAGEIAWPMLKIMLLIVVVAFIGNVSLGGMNFSTQAMMPKASKMSPLAGFKRMFGVQALVELTKGIAKFSVVAFSA
YFLLSYYFNDILLLSSDHLPGNVHHALDLLIWMFILLCSSVLLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEV
KGRVRQMQRELAQRRMMAEVPNADVIVVNPEHYAVAVKYDVKRSAAPFVIAKGVDDVAFKIREVAREYNIAIVSAPPLAR
AIYHTTKLDQQIPEGLFTAVAQVLAYVFQLRQYQKGRGRKPIPIPLNQPIPDDLKY
>Mature_375_residues
AEESSGERSEEPTGRRLEQAREKGQVARSKELGTAAVLLSAATGFYMLGPGIATALSHVFERVFTMDRAQIYDTNQMFNV
WGLVAGEIAWPMLKIMLLIVVVAFIGNVSLGGMNFSTQAMMPKASKMSPLAGFKRMFGVQALVELTKGIAKFSVVAFSAY
FLLSYYFNDILLLSSDHLPGNVHHALDLLIWMFILLCSSVLLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEVK
GRVRQMQRELAQRRMMAEVPNADVIVVNPEHYAVAVKYDVKRSAAPFVIAKGVDDVAFKIREVAREYNIAIVSAPPLARA
IYHTTKLDQQIPEGLFTAVAQVLAYVFQLRQYQKGRGRKPIPIPLNQPIPDDLKY

Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]

COG id: COG1377

COG function: function code NU; Flagellar biosynthesis pathway, component FlhB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family [H]

Homologues:

Organism=Escherichia coli, GI1788188, Length=376, Percent_Identity=41.2234042553192, Blast_Score=261, Evalue=7e-71,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006136
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 42124; Mature: 41993

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEESSGERSEEPTGRRLEQAREKGQVARSKELGTAAVLLSAATGFYMLGPGIATALSHV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHH
FERVFTMDRAQIYDTNQMFNVWGLVAGEIAWPMLKIMLLIVVVAFIGNVSLGGMNFSTQA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
MMPKASKMSPLAGFKRMFGVQALVELTKGIAKFSVVAFSAYFLLSYYFNDILLLSSDHLP
HCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
GNVHHALDLLIWMFILLCSSVLLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH
KGRVRQMQRELAQRRMMAEVPNADVIVVNPEHYAVAVKYDVKRSAAPFVIAKGVDDVAFK
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCCCEEEECCCHHHHHH
IREVAREYNIAIVSAPPLARAIYHTTKLDQQIPEGLFTAVAQVLAYVFQLRQYQKGRGRK
HHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PIPIPLNQPIPDDLKY
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEESSGERSEEPTGRRLEQAREKGQVARSKELGTAAVLLSAATGFYMLGPGIATALSHV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHH
FERVFTMDRAQIYDTNQMFNVWGLVAGEIAWPMLKIMLLIVVVAFIGNVSLGGMNFSTQA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
MMPKASKMSPLAGFKRMFGVQALVELTKGIAKFSVVAFSAYFLLSYYFNDILLLSSDHLP
HCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
GNVHHALDLLIWMFILLCSSVLLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH
KGRVRQMQRELAQRRMMAEVPNADVIVVNPEHYAVAVKYDVKRSAAPFVIAKGVDDVAFK
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCCCEEEECCCHHHHHH
IREVAREYNIAIVSAPPLARAIYHTTKLDQQIPEGLFTAVAQVLAYVFQLRQYQKGRGRK
HHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PIPIPLNQPIPDDLKY
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8002587; 11677609; 3298217 [H]