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The map label for this gene is fliN

Identifier: 120598258

GI number: 120598258

Start: 1622836

End: 1623219

Strand: Direct

Name: fliN

Synonym: Sputw3181_1435

Alternate gene names: 120598258

Gene position: 1622836-1623219 (Clockwise)

Preceding gene: 120598257

Following gene: 120598259

Centisome position: 34.47

GC content: 44.53

Gene sequence:

>384_bases
ATGAGCACAGAAGATACGGGCGATGATTGGGCTGCCGCGATGGCGGAGCAGGCTTTAGAGGAGGCAAATGCTGTTGCGCT
GGATGAGCTTGTTGATGACTCTCAGCCTATTAGTAAAGCAGATGCTGCTAAATTAGATACGATTTTGGATATTCCGGTGA
CCATTTCAATGGAAGTGGGCCGTAGTTTTATTAGTATCCGCAATTTACTACAGCTAAACCAAGGTTCTGTCGTTGAGCTT
GACCGTGTGGCTGGAGAGCCGTTAGACGTGATGGTCAATGGGACACTTATTGCCCATGGCGAAGTGGTTGTAGTAAATGA
CAAGTTTGGTATTCGTTTAACTGATGTTATCAGTCAAACTGAGCGAATTAAAAAGCTTAAATAA

Upstream 100 bases:

>100_bases
ATGAAAAAATACCCCGTCCAGAAACAGTAAAAACTGAACTCCAATTAGTGACGCGCAAAGGCAAAGCTAGAGATATATCT
GAATTATAAGGTGAAGCAAG

Downstream 100 bases:

>100_bases
TAGATGCACATGAGTTGGTATATGAGATGAGTACATCGGTAATATTCAGTTTAATGCCTGTTACGCAGGCTAATGCCGTG
GGATTAGTTACCGACACTTC

Product: flagellar motor switch protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSTEDTGDDWAAAMAEQALEEANAVALDELVDDSQPISKADAAKLDTILDIPVTISMEVGRSFISIRNLLQLNQGSVVEL
DRVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERIKKLK

Sequences:

>Translated_127_residues
MSTEDTGDDWAAAMAEQALEEANAVALDELVDDSQPISKADAAKLDTILDIPVTISMEVGRSFISIRNLLQLNQGSVVEL
DRVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERIKKLK
>Mature_126_residues
STEDTGDDWAAAMAEQALEEANAVALDELVDDSQPISKADAAKLDTILDIPVTISMEVGRSFISIRNLLQLNQGSVVELD
RVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERIKKLK

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Bacterial flagellum basal body (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=123, Percent_Identity=47.1544715447154, Blast_Score=111, Evalue=1e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 13719; Mature: 13588

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEDTGDDWAAAMAEQALEEANAVALDELVDDSQPISKADAAKLDTILDIPVTISMEVG
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHCEEECCCEEEEHHHH
RSFISIRNLLQLNQGSVVELDRVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQT
HHHHHHHHHHHCCCCCEEEEHHHCCCCEEEEECCEEEECCEEEEEECCCCEEHHHHHHHH
ERIKKLK
HHHHCCC
>Mature Secondary Structure 
STEDTGDDWAAAMAEQALEEANAVALDELVDDSQPISKADAAKLDTILDIPVTISMEVG
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHCEEECCCEEEEHHHH
RSFISIRNLLQLNQGSVVELDRVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQT
HHHHHHHHHHHCCCCCEEEEHHHCCCCEEEEECCEEEECCEEEEEECCCCEEHHHHHHHH
ERIKKLK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622217; 10984043 [H]