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The map label for this gene is fliM

Identifier: 120598257

GI number: 120598257

Start: 1621793

End: 1622824

Strand: Direct

Name: fliM

Synonym: Sputw3181_1434

Alternate gene names: 120598257

Gene position: 1621793-1622824 (Clockwise)

Preceding gene: 120598256

Following gene: 120598258

Centisome position: 34.44

GC content: 44.48

Gene sequence:

>1032_bases
GTGAGTGATTTATTAAGCCAAGACGAAATTGATGCGCTACTGCATGGGGTTGATGACGTCGATGACGATGATGATCTTGA
TGCTGCTAGCCAAGATGCGCGATCCTACGACTTTTCATCCCAAGATCGTATTGTGCGTGGGCGCATGCCCACACTCGAAA
TTGTTAACGAGCGATTTGCGCGTCATCTACGTATTAGCATGTTCAATATGATGCGCCGTGCGGCTGAAGTGTCGATCAAT
GGCGTACAGATGCTCAAGTTTGGTGAGTACGTACATACCTTATTCGTCCCAACCAGTCTGAACATGGTACGTTTTAGTCC
ACTCAAAGGGACTGCACTTATCACCATGGAAGCTCGCTTAGTGTTTATCCTTGTGGATAACTTTTTTGGCGGTGATGGCC
GGTTCCATGCCAAGATTGAAGGGCGTGAGTTTACCCCTACTGAGCGGCGGATTGTACAGCTTCTTTTAAAAATTATCTTT
GAAGATTATAAAGATGCTTGGGCTCCAGTCATGGATGTCGAATTCGACTATCTTGACTCTGAAGTTAACCCTGCCATGGC
GAATATTGTCAGTCCAACCGAAGTGGTGGTGATAAACTCCTTCCATATTGAGGTGGACGGCGGCGGCGGGGATTTTCACA
TTACTATGCCGTACTCCATGATCGAACCTATTCGAGAGTTGTTGGATGCAGGGGTGCAAAGTGATAAGCAAGATACGGAT
ATGCGCTGGTCACAGGCATTACATGATGAAATCATGGATGTAAAAGTGGGATTCGATGCATGCGTTGTTGAGCATGAGTT
AACGCTCAAAGATGTAATGAACTTTAAAGCCGGTGATATTATTCCAGTTGAATTGCCTGAATATATCATGATGAAAATCG
AAGACCTACCGACTTACCGCTGTAAAATGGGGCGTTCTCGCGATAATTTAGCGCTCAAAATATATGAAAAAATACCCCGT
CCAGAAACAGTAAAAACTGAACTCCAATTAGTGACGCGCAAAGGCAAAGCTAGAGATATATCTGAATTATAA

Upstream 100 bases:

>100_bases
ATCCGTAACGGGACGTAAAGTGGTCGAAAAAGTGCTATTCACCGGTTTTGTGATGCAATAACCCGTAATTTCAGTACCCT
AAAGAGGTTAAGGCAATATA

Downstream 100 bases:

>100_bases
GGTGAAGCAAGATGAGCACAGAAGATACGGGCGATGATTGGGCTGCCGCGATGGCGGAGCAGGCTTTAGAGGAGGCAAAT
GCTGTTGCGCTGGATGAGCT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSDLLSQDEIDALLHGVDDVDDDDDLDAASQDARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSIN
GVQMLKFGEYVHTLFVPTSLNMVRFSPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIF
EDYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTD
MRWSQALHDEIMDVKVGFDACVVEHELTLKDVMNFKAGDIIPVELPEYIMMKIEDLPTYRCKMGRSRDNLALKIYEKIPR
PETVKTELQLVTRKGKARDISEL

Sequences:

>Translated_343_residues
MSDLLSQDEIDALLHGVDDVDDDDDLDAASQDARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSIN
GVQMLKFGEYVHTLFVPTSLNMVRFSPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIF
EDYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTD
MRWSQALHDEIMDVKVGFDACVVEHELTLKDVMNFKAGDIIPVELPEYIMMKIEDLPTYRCKMGRSRDNLALKIYEKIPR
PETVKTELQLVTRKGKARDISEL
>Mature_342_residues
SDLLSQDEIDALLHGVDDVDDDDDLDAASQDARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSING
VQMLKFGEYVHTLFVPTSLNMVRFSPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFE
DYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDM
RWSQALHDEIMDVKVGFDACVVEHELTLKDVMNFKAGDIIPVELPEYIMMKIEDLPTYRCKMGRSRDNLALKIYEKIPRP
ETVKTELQLVTRKGKARDISEL

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=313, Percent_Identity=38.9776357827476, Blast_Score=257, Evalue=8e-70,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 39176; Mature: 39045

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLLSQDEIDALLHGVDDVDDDDDLDAASQDARSYDFSSQDRIVRGRMPTLEIVNERFA
CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHH
RHLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFSPLKGTALITMEARL
HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHEEEEEECCCCCEEEECCCCCEEEEEEECEE
VFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDS
EEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCC
EVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTD
CCCHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHH
MRWSQALHDEIMDVKVGFDACVVEHELTLKDVMNFKAGDIIPVELPEYIMMKIEDLPTYR
HHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHCCCCCCEEEECCCHHHHHHHHCCCCHH
CKMGRSRDNLALKIYEKIPRPETVKTELQLVTRKGKARDISEL
HHCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SDLLSQDEIDALLHGVDDVDDDDDLDAASQDARSYDFSSQDRIVRGRMPTLEIVNERFA
CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHH
RHLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFSPLKGTALITMEARL
HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHEEEEEECCCCCEEEECCCCCEEEEEEECEE
VFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDS
EEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCC
EVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTD
CCCHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHH
MRWSQALHDEIMDVKVGFDACVVEHELTLKDVMNFKAGDIIPVELPEYIMMKIEDLPTYR
HHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHCCCCCCEEEECCCHHHHHHHHCCCCHH
CKMGRSRDNLALKIYEKIPRPETVKTELQLVTRKGKARDISEL
HHCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]