| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is fliK [C]
Identifier: 120598255
GI number: 120598255
Start: 1619671
End: 1621146
Strand: Direct
Name: fliK [C]
Synonym: Sputw3181_1432
Alternate gene names: 120598255
Gene position: 1619671-1621146 (Clockwise)
Preceding gene: 120598254
Following gene: 120598256
Centisome position: 34.4
GC content: 43.02
Gene sequence:
>1476_bases ATGCAACAAATGACGAATATATTATTACCAAAAGCGGCAAATAATAATGCAAGCGCAGGTAAAGCATCGACTCCAGAAAC GCGTAGTGAAGATTTTTCTGCAGCTTTAGCCTCAGTTAACAGTGTTTCCTCATCTGCCCAAAAGCCTTCAACGTCTCAAG AACGCGCGATTGAACTGACTAAATCAGCATCCTCCAATGATATATCCCAAGATGAAGAGGATGATTTGAGTTTGATTTTT GCCCAGATTAGCATGGCAAACGAAATGAAAAAAACGGCCGCTGAGGGCGACAAATTGCCGCTACTGCAGGAAATGGATCT GGATATTGGTACTTCTGCCGTTGAAGCTGAGGGTTGTTTTTCCTCTGAGTTAGATAAATTAGCCGAGTTATTAGTTGATT CGTCAGATACGGATGAATCGGGTGTAGCTTTGATTGCTGAGGCTGATGCCACTAACTTACCCGACATTAATTTGGCTTTA CCCCTATCAACGCCAAGCATGCTAGATGGAGCTATTGCGTCACAAAACAATGGGGAACTGCCAGAGCAGAGCGTATTGGT TGAAGAAAGCACGGTCGAACTGGTTAGCCAAGAAGCCGCTAAACAACAGAAGCAAGGGATAGTAGATGCTCAACCTATTA TGGGAGAAAATGATAGTAGCAGGTCTTTTTCTGCAGATAAGTCGTCTATTGCCCAACAAAATGCTTTTACAACGGGTCTA AAAGATACAAACAGTATTGATGGTACAAAGAAGGAATCTTTTGTTAGTGCAACCACTGCAGCCTTAAATACATTAGGGAC TGCGGAGGATGTGGCAACTCCGAAAAACATTGAGCTAGATGGATCAGAACGGCTTGTGACAAACGTACAACTTAAAGATG CCAAGTTAGCTGTTACATTAGAGTCAAGTTCACCGACTTCATTTAATCTTGATGACGAAGTCGCCTCTGAGTTTAAACCC GTTTCAGTGACAACATCACCTACTCAACCGCAAGTGAATCGTCAAGATATCCCGCAAATTCAACTTTCACTGCGTCAAGG CGTTGAAACGCCAAATCAGATGCAGGAGATGATCCAACGATTTTCTCCGGTGATGAAACAACAGCTCATTACGATGGTGA GTAATGGTATCCAACACGCTGAAATTCGTCTTGATCCACCTGAGCTTGGCCATATGACGGTCAAAATCCAAGTGCACGGC GATCAAACCCAAGTACAGTTTCATGTGACTCAATCTCAAACCCGTGACATGGTTGAGCAAGCTATCCCTCGATTACGTGA ATTATTGCAAGAGCAAGGAATGCAACTCGCAGATAGTCATGTATCACAAGGTGAGCAAGAACAAGGTCGCGATGGTGGTT TTGGCGAAAGTAACGGTTCTGGAAGCACAAATTTGGATGAATTCTCAGCAGAAGAACTGGATTTAGGTTTAAATCAAACT ACTAGTCTGCATTCTGGTATAGATTATTACGCTTAA
Upstream 100 bases:
>100_bases TTTTATTTGCTTAACTTCATACACAACATTGCTGTTACAGCATAAATTGACGTTTTACTCCGTTACTGTTGAGTTTAACT GGGGTGGTTTGGGAGCCGAT
Downstream 100 bases:
>100_bases GCGGGTAACCTATAGGATTAAATAGCATTGTTACATTTTGATATGATGCATAAAATGTAAAGACTTAAGTCTAAATTGAA GAGCACAGTGAATGGCCAAC
Product: flagellar hook-length control protein
Products: NA
Alternate protein names: Flagellar Hook-Length Control Protein FliK; Polar Flagellar Hook-Length Control Protein FliK; Flagellar Protein; Flagellar Hook-Length Control Protein-Like Protein; Flagellar Hook Length Control Protein FliK; Polar Flagellar Hook-Length Control Protein
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MQQMTNILLPKAANNNASAGKASTPETRSEDFSAALASVNSVSSSAQKPSTSQERAIELTKSASSNDISQDEEDDLSLIF AQISMANEMKKTAAEGDKLPLLQEMDLDIGTSAVEAEGCFSSELDKLAELLVDSSDTDESGVALIAEADATNLPDINLAL PLSTPSMLDGAIASQNNGELPEQSVLVEESTVELVSQEAAKQQKQGIVDAQPIMGENDSSRSFSADKSSIAQQNAFTTGL KDTNSIDGTKKESFVSATTAALNTLGTAEDVATPKNIELDGSERLVTNVQLKDAKLAVTLESSSPTSFNLDDEVASEFKP VSVTTSPTQPQVNRQDIPQIQLSLRQGVETPNQMQEMIQRFSPVMKQQLITMVSNGIQHAEIRLDPPELGHMTVKIQVHG DQTQVQFHVTQSQTRDMVEQAIPRLRELLQEQGMQLADSHVSQGEQEQGRDGGFGESNGSGSTNLDEFSAEELDLGLNQT TSLHSGIDYYA
Sequences:
>Translated_491_residues MQQMTNILLPKAANNNASAGKASTPETRSEDFSAALASVNSVSSSAQKPSTSQERAIELTKSASSNDISQDEEDDLSLIF AQISMANEMKKTAAEGDKLPLLQEMDLDIGTSAVEAEGCFSSELDKLAELLVDSSDTDESGVALIAEADATNLPDINLAL PLSTPSMLDGAIASQNNGELPEQSVLVEESTVELVSQEAAKQQKQGIVDAQPIMGENDSSRSFSADKSSIAQQNAFTTGL KDTNSIDGTKKESFVSATTAALNTLGTAEDVATPKNIELDGSERLVTNVQLKDAKLAVTLESSSPTSFNLDDEVASEFKP VSVTTSPTQPQVNRQDIPQIQLSLRQGVETPNQMQEMIQRFSPVMKQQLITMVSNGIQHAEIRLDPPELGHMTVKIQVHG DQTQVQFHVTQSQTRDMVEQAIPRLRELLQEQGMQLADSHVSQGEQEQGRDGGFGESNGSGSTNLDEFSAEELDLGLNQT TSLHSGIDYYA >Mature_491_residues MQQMTNILLPKAANNNASAGKASTPETRSEDFSAALASVNSVSSSAQKPSTSQERAIELTKSASSNDISQDEEDDLSLIF AQISMANEMKKTAAEGDKLPLLQEMDLDIGTSAVEAEGCFSSELDKLAELLVDSSDTDESGVALIAEADATNLPDINLAL PLSTPSMLDGAIASQNNGELPEQSVLVEESTVELVSQEAAKQQKQGIVDAQPIMGENDSSRSFSADKSSIAQQNAFTTGL KDTNSIDGTKKESFVSATTAALNTLGTAEDVATPKNIELDGSERLVTNVQLKDAKLAVTLESSSPTSFNLDDEVASEFKP VSVTTSPTQPQVNRQDIPQIQLSLRQGVETPNQMQEMIQRFSPVMKQQLITMVSNGIQHAEIRLDPPELGHMTVKIQVHG DQTQVQFHVTQSQTRDMVEQAIPRLRELLQEQGMQLADSHVSQGEQEQGRDGGFGESNGSGSTNLDEFSAEELDLGLNQT TSLHSGIDYYA
Specific function: Controls The Length Of The Flagellar Hook. [C]
COG id: COG3144
COG function: function code N; Flagellar hook-length control protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52678; Mature: 52678
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQMTNILLPKAANNNASAGKASTPETRSEDFSAALASVNSVSSSAQKPSTSQERAIELT CCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KSASSNDISQDEEDDLSLIFAQISMANEMKKTAAEGDKLPLLQEMDLDIGTSAVEAEGCF HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHCCCH SSELDKLAELLVDSSDTDESGVALIAEADATNLPDINLALPLSTPSMLDGAIASQNNGEL HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCC PEQSVLVEESTVELVSQEAAKQQKQGIVDAQPIMGENDSSRSFSADKSSIAQQNAFTTGL CCHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC KDTNSIDGTKKESFVSATTAALNTLGTAEDVATPKNIELDGSERLVTNVQLKDAKLAVTL CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCEEECCCCEEEEEEEEECCEEEEEE ESSSPTSFNLDDEVASEFKPVSVTTSPTQPQVNRQDIPQIQLSLRQGVETPNQMQEMIQR ECCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH FSPVMKQQLITMVSNGIQHAEIRLDPPELGHMTVKIQVHGDQTQVQFHVTQSQTRDMVEQ HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCEEEEEEECHHHHHHHHHH AIPRLRELLQEQGMQLADSHVSQGEQEQGRDGGFGESNGSGSTNLDEFSAEELDLGLNQT HHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHCHHHHHCCCCCC TSLHSGIDYYA HHHHCCCCCCC >Mature Secondary Structure MQQMTNILLPKAANNNASAGKASTPETRSEDFSAALASVNSVSSSAQKPSTSQERAIELT CCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KSASSNDISQDEEDDLSLIFAQISMANEMKKTAAEGDKLPLLQEMDLDIGTSAVEAEGCF HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHCCCH SSELDKLAELLVDSSDTDESGVALIAEADATNLPDINLALPLSTPSMLDGAIASQNNGEL HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCC PEQSVLVEESTVELVSQEAAKQQKQGIVDAQPIMGENDSSRSFSADKSSIAQQNAFTTGL CCHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC KDTNSIDGTKKESFVSATTAALNTLGTAEDVATPKNIELDGSERLVTNVQLKDAKLAVTL CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCEEECCCCEEEEEEEEECCEEEEEE ESSSPTSFNLDDEVASEFKPVSVTTSPTQPQVNRQDIPQIQLSLRQGVETPNQMQEMIQR ECCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH FSPVMKQQLITMVSNGIQHAEIRLDPPELGHMTVKIQVHGDQTQVQFHVTQSQTRDMVEQ HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCEEEEEEECHHHHHHHHHH AIPRLRELLQEQGMQLADSHVSQGEQEQGRDGGFGESNGSGSTNLDEFSAEELDLGLNQT HHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHCHHHHHCCCCCC TSLHSGIDYYA HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA