| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is fliL
Identifier: 120598256
GI number: 120598256
Start: 1621238
End: 1621753
Strand: Direct
Name: fliL
Synonym: Sputw3181_1433
Alternate gene names: NA
Gene position: 1621238-1621753 (Clockwise)
Preceding gene: 120598255
Following gene: 120598257
Centisome position: 34.43
GC content: 41.67
Gene sequence:
>516_bases ATGGCCAACGAAGAATCGTTAGAACTTGAAAATACTGATACGCCTAAAAGTAAGAAAAAACTTTTTATTTTTATTGGTAT CGGTGTACTCGTTGCACTATTGATTGGTGGTGCATTATGGTTTTTTCTCGGCAGTTCAGATGAGTCATCCTCTGAAGCTG TAGAGGCTGTGGTTGAAACACCTTCAAATGATAAACTGGTCGCCTCTTATGTGCCCATGCCTCGTCCTTTTCTCTTTAAT TTACCCGGGCCAGATCGGGCTCGTTTAGTCGAAATTAAAGTACAGCTGATGGTCCGAGGTTCCGATGATGAGGTCCTGAT ACAAAAACATATTCCGCTCATTGAAGATGCTCTCCTGACAACTTTTAGCAGTTCAGATGTGCAAAAGTTAAGCACTCAAG CAGGTAAGGATGAAGCTCGTCAATTAGCACTTCTTAGTGTTCAAAATACACTGCAATCCGTAACGGGACGTAAAGTGGTC GAAAAAGTGCTATTCACCGGTTTTGTGATGCAATAA
Upstream 100 bases:
>100_bases TACGCTTAAGCGGGTAACCTATAGGATTAAATAGCATTGTTACATTTTGATATGATGCATAAAATGTAAAGACTTAAGTC TAAATTGAAGAGCACAGTGA
Downstream 100 bases:
>100_bases CCCGTAATTTCAGTACCCTAAAGAGGTTAAGGCAATATAGTGAGTGATTTATTAAGCCAAGACGAAATTGATGCGCTACT GCATGGGGTTGATGACGTCG
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: Flagellar Protein FliL; Flagellar Biosynthesis Protein FliL
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MANEESLELENTDTPKSKKKLFIFIGIGVLVALLIGGALWFFLGSSDESSSEAVEAVVETPSNDKLVASYVPMPRPFLFN LPGPDRARLVEIKVQLMVRGSDDEVLIQKHIPLIEDALLTTFSSSDVQKLSTQAGKDEARQLALLSVQNTLQSVTGRKVV EKVLFTGFVMQ
Sequences:
>Translated_171_residues MANEESLELENTDTPKSKKKLFIFIGIGVLVALLIGGALWFFLGSSDESSSEAVEAVVETPSNDKLVASYVPMPRPFLFN LPGPDRARLVEIKVQLMVRGSDDEVLIQKHIPLIEDALLTTFSSSDVQKLSTQAGKDEARQLALLSVQNTLQSVTGRKVV EKVLFTGFVMQ >Mature_170_residues ANEESLELENTDTPKSKKKLFIFIGIGVLVALLIGGALWFFLGSSDESSSEAVEAVVETPSNDKLVASYVPMPRPFLFNL PGPDRARLVEIKVQLMVRGSDDEVLIQKHIPLIEDALLTTFSSSDVQKLSTQAGKDEARQLALLSVQNTLQSVTGRKVVE KVLFTGFVMQ
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18736; Mature: 18605
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANEESLELENTDTPKSKKKLFIFIGIGVLVALLIGGALWFFLGSSDESSSEAVEAVVET CCCCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC PSNDKLVASYVPMPRPFLFNLPGPDRARLVEIKVQLMVRGSDDEVLIQKHIPLIEDALLT CCCCCEEEECCCCCCCEEEECCCCCCCEEEEEEEEEEEECCCCCEEHHHCCCHHHHHHHH TFSSSDVQKLSTQAGKDEARQLALLSVQNTLQSVTGRKVVEKVLFTGFVMQ HCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANEESLELENTDTPKSKKKLFIFIGIGVLVALLIGGALWFFLGSSDESSSEAVEAVVET CCCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC PSNDKLVASYVPMPRPFLFNLPGPDRARLVEIKVQLMVRGSDDEVLIQKHIPLIEDALLT CCCCCEEEECCCCCCCEEEECCCCCCCEEEEEEEEEEEECCCCCEEHHHCCCHHHHHHHH TFSSSDVQKLSTQAGKDEARQLALLSVQNTLQSVTGRKVVEKVLFTGFVMQ HCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA