| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120598211
Identifier: 120598211
GI number: 120598211
Start: 1577703
End: 1578893
Strand: Direct
Name: 120598211
Synonym: Sputw3181_1388
Alternate gene names: NA
Gene position: 1577703-1578893 (Clockwise)
Preceding gene: 120598210
Following gene: 120598212
Centisome position: 33.51
GC content: 41.31
Gene sequence:
>1191_bases ATGCAGCGATACATTTCAATAAACCAAGCTTTAGATGCTCCTGAAGTCGAACATTTACTTAGAGGACAAACCGGGACTCG ATTTAATCCTGTCCCTTTAGCCTGTTTTGCGCCTGTTATTAGAGAGTTTTTAGCGGATTTATCACAACGTCTTCAACAGC AATATCGGATGGTACCAGAGCTAGCGGCTTTTGGTTTTTGGTTACGTCCACGGCAAGTTGAACAACAGGTCCTTCGCTTA TCAGGTCGTGCGCCACTTGGAATGGTTTTTCATTTGGTACCATCTAACGTCCCGACAATAGCATTTTATTCTTGGATAAT GGCCTTGTTAATGGGAAATTCGAGCATTATCCGATTATCTTCACGTAAACACCCCACTCAAGAGATAATGTTGGAACTAC TCTCTGCAATGTTACTAGAGTCGCGTTGGAGCCCAATAGCAGAGCGAACCCGTTTTATCCGCTACCAGCATAATGATGAA ATAACCAAATGGTTTAGCGAAGAATGTCATCTGAGAGTGATATGGGGAGGAGACAAAACAATCCGTGCGATTAGACAGCT TGGATTATCAGCTACTGCTCAAGAATTGGTATTTCCTGACCGTCGTTCGATGGCGATTATCGATAGTCAATGGGTATCAA CATTGGATACTGATACATGGGCAAGTTTAGTGAGTGAATTTAAACAAGACTGTACGTTATTCGATCAAAAAGCTTGCTCG TCACCCACGATGCTAGTTTGGATTGGGCAGCCTGATATTGCAGTAAAACAAAGGCTATTAGAAGAGACATTTTATACTTT TGGGCTTAATTCTAGTTTGGTAATGGAACGTTTAGTTCAAAGCCAAATGAATGCTGCAATTGTTCAATCTCAAGAGTTAA CGTGCTACAAAGGTGTAAGCGTATTTTCTCATCAAAAACCGACCATTTTAGATTATACAGGCCCAGGCTTATTAACTGAG AGTGTTATGCCAAATTGGCAGGCGATTAGCAATACTTATTGGGATATTCAGACTTGTGTCTATTTAGGTGAGTCACTTGC ACAATGTCGCGATGAGTTAAGTTGTATTGTTGGGCGTGTTGATCGTGTTGTTAAACCTGGCCAAGCACTTGCATTTGATT GGTATTGGGATGGGATCGATATCTTACATTCTTGTAGCCGGAAAAAATGTAATTGGGGGAACCATGGTTAA
Upstream 100 bases:
>100_bases AAGATATTGGGCGAATAATTGGGATTGATAATTGTTGCTGTGGTCGTAAGGGACAGTATTTTGAAGTGATTGGACGTCAA AAAGGCGCAGAGGTCAGGGG
Downstream 100 bases:
>100_bases ATATTCAGGAGTTTGTATTTTATTTGGTGCTGGCGGCGGCGGAGAAAATGCACTTTCATTATTAAAGCTTGAAGGATGTA ATATTAGCGCTATTGTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl-CoA Reductase LuxC; Long-Chain-Fatty-Acyl-CoA Reductase; Acyl-CoA Reductase Superfamily Protein
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MQRYISINQALDAPEVEHLLRGQTGTRFNPVPLACFAPVIREFLADLSQRLQQQYRMVPELAAFGFWLRPRQVEQQVLRL SGRAPLGMVFHLVPSNVPTIAFYSWIMALLMGNSSIIRLSSRKHPTQEIMLELLSAMLLESRWSPIAERTRFIRYQHNDE ITKWFSEECHLRVIWGGDKTIRAIRQLGLSATAQELVFPDRRSMAIIDSQWVSTLDTDTWASLVSEFKQDCTLFDQKACS SPTMLVWIGQPDIAVKQRLLEETFYTFGLNSSLVMERLVQSQMNAAIVQSQELTCYKGVSVFSHQKPTILDYTGPGLLTE SVMPNWQAISNTYWDIQTCVYLGESLAQCRDELSCIVGRVDRVVKPGQALAFDWYWDGIDILHSCSRKKCNWGNHG
Sequences:
>Translated_396_residues MQRYISINQALDAPEVEHLLRGQTGTRFNPVPLACFAPVIREFLADLSQRLQQQYRMVPELAAFGFWLRPRQVEQQVLRL SGRAPLGMVFHLVPSNVPTIAFYSWIMALLMGNSSIIRLSSRKHPTQEIMLELLSAMLLESRWSPIAERTRFIRYQHNDE ITKWFSEECHLRVIWGGDKTIRAIRQLGLSATAQELVFPDRRSMAIIDSQWVSTLDTDTWASLVSEFKQDCTLFDQKACS SPTMLVWIGQPDIAVKQRLLEETFYTFGLNSSLVMERLVQSQMNAAIVQSQELTCYKGVSVFSHQKPTILDYTGPGLLTE SVMPNWQAISNTYWDIQTCVYLGESLAQCRDELSCIVGRVDRVVKPGQALAFDWYWDGIDILHSCSRKKCNWGNHG >Mature_396_residues MQRYISINQALDAPEVEHLLRGQTGTRFNPVPLACFAPVIREFLADLSQRLQQQYRMVPELAAFGFWLRPRQVEQQVLRL SGRAPLGMVFHLVPSNVPTIAFYSWIMALLMGNSSIIRLSSRKHPTQEIMLELLSAMLLESRWSPIAERTRFIRYQHNDE ITKWFSEECHLRVIWGGDKTIRAIRQLGLSATAQELVFPDRRSMAIIDSQWVSTLDTDTWASLVSEFKQDCTLFDQKACS SPTMLVWIGQPDIAVKQRLLEETFYTFGLNSSLVMERLVQSQMNAAIVQSQELTCYKGVSVFSHQKPTILDYTGPGLLTE SVMPNWQAISNTYWDIQTCVYLGESLAQCRDELSCIVGRVDRVVKPGQALAFDWYWDGIDILHSCSRKKCNWGNHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45317; Mature: 45317
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRYISINQALDAPEVEHLLRGQTGTRFNPVPLACFAPVIREFLADLSQRLQQQYRMVPE CCCEEEHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAFGFWLRPRQVEQQVLRLSGRAPLGMVFHLVPSNVPTIAFYSWIMALLMGNSSIIRLS HHHHHHCCCHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHCCCCEEEEC SRKHPTQEIMLELLSAMLLESRWSPIAERTRFIRYQHNDEITKWFSEECHLRVIWGGDKT CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCHH IRAIRQLGLSATAQELVFPDRRSMAIIDSQWVSTLDTDTWASLVSEFKQDCTLFDQKACS HHHHHHHCCCHHHHHHCCCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC SPTMLVWIGQPDIAVKQRLLEETFYTFGLNSSLVMERLVQSQMNAAIVQSQELTCYKGVS CCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCH VFSHQKPTILDYTGPGLLTESVMPNWQAISNTYWDIQTCVYLGESLAQCRDELSCIVGRV HHCCCCCCEEEECCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRVVKPGQALAFDWYWDGIDILHSCSRKKCNWGNHG HHHCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQRYISINQALDAPEVEHLLRGQTGTRFNPVPLACFAPVIREFLADLSQRLQQQYRMVPE CCCEEEHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAFGFWLRPRQVEQQVLRLSGRAPLGMVFHLVPSNVPTIAFYSWIMALLMGNSSIIRLS HHHHHHCCCHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHCCCCEEEEC SRKHPTQEIMLELLSAMLLESRWSPIAERTRFIRYQHNDEITKWFSEECHLRVIWGGDKT CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCHH IRAIRQLGLSATAQELVFPDRRSMAIIDSQWVSTLDTDTWASLVSEFKQDCTLFDQKACS HHHHHHHCCCHHHHHHCCCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC SPTMLVWIGQPDIAVKQRLLEETFYTFGLNSSLVMERLVQSQMNAAIVQSQELTCYKGVS CCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCH VFSHQKPTILDYTGPGLLTESVMPNWQAISNTYWDIQTCVYLGESLAQCRDELSCIVGRV HHCCCCCCEEEECCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRVVKPGQALAFDWYWDGIDILHSCSRKKCNWGNHG HHHCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA