Click here to switch to the map view.

The map label for this gene is 120598212

Identifier: 120598212

GI number: 120598212

Start: 1578886

End: 1579731

Strand: Direct

Name: 120598212

Synonym: Sputw3181_1389

Alternate gene names: NA

Gene position: 1578886-1579731 (Clockwise)

Preceding gene: 120598211

Following gene: 120598213

Centisome position: 33.53

GC content: 31.56

Gene sequence:

>846_bases
ATGGTTAAATATTCAGGAGTTTGTATTTTATTTGGTGCTGGCGGCGGCGGAGAAAATGCACTTTCATTATTAAAGCTTGA
AGGATGTAATATTAGCGCTATTGTCGACAATGATCTAAAAAAGCACAATACCTTTTTAGATGATACTCCTATTTATGCTC
CTGAAAAATTGAATTGTGATTTGATTTTTGACAAAATACTTATTGCAAGTGGATACTCTAAGTCAATCTTAGCGCAATTG
GGGCAATATAATATAAGCCAAGAGCGTATTATTGTATTACCTCAATATTACTTAAAGCCTAATCGGTTTTCCGATCAGGT
TTTATACTCTTTAGCTTGGGATTTTATTTTTAGTTTTTCTGAATTAATGAGTAAATTAAATATTCGATATTGGTTGGATT
ATGGGACGTTACTTGGGCTTGTAAGGGATAATGATTTAATTTCATGGGATTCCGATCTTGATTTTTGCATTTTAGATGAG
AATAAAGGTTATTTGATTAATAGTTTTTCTGTTATATCTGAACATATATCCTCCACTATTGGATGTGATGTTAAAATTGA
GCTGATAAAAGGTGTTGAATGTGAGCATTCAAGAGTTTTTATATCTTGTAATCGTGATAATGTGATTCTCGATATTGATG
TATTTATCAAATTTAACTTCTCTAATTTTGTGTGTTTGGAAGTCATGGATAGGGTTGAGCGTTATAATACTGAGCATTAT
GTTGCAGTTGACTTTTTGAATGTAAAAGGAATTTCTTTACCAGTACCCAATAAGTATGATCAATATTTGACAAGAGTATA
CGGTAGTTGGTGTGTTGCCAACAAAGAGTGGACTTTATATTCATAA

Upstream 100 bases:

>100_bases
CGTGTTGTTAAACCTGGCCAAGCACTTGCATTTGATTGGTATTGGGATGGGATCGATATCTTACATTCTTGTAGCCGGAA
AAAATGTAATTGGGGGAACC

Downstream 100 bases:

>100_bases
ATGTAGGAGAAAATTATGGCTAGGATTTATGGCGACGATAAATTAAAACTATCCTACGATAATGTTGTAAAGTTCTTTGA
GGATAGGGCGAGAAAATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MVKYSGVCILFGAGGGGENALSLLKLEGCNISAIVDNDLKKHNTFLDDTPIYAPEKLNCDLIFDKILIASGYSKSILAQL
GQYNISQERIIVLPQYYLKPNRFSDQVLYSLAWDFIFSFSELMSKLNIRYWLDYGTLLGLVRDNDLISWDSDLDFCILDE
NKGYLINSFSVISEHISSTIGCDVKIELIKGVECEHSRVFISCNRDNVILDIDVFIKFNFSNFVCLEVMDRVERYNTEHY
VAVDFLNVKGISLPVPNKYDQYLTRVYGSWCVANKEWTLYS

Sequences:

>Translated_281_residues
MVKYSGVCILFGAGGGGENALSLLKLEGCNISAIVDNDLKKHNTFLDDTPIYAPEKLNCDLIFDKILIASGYSKSILAQL
GQYNISQERIIVLPQYYLKPNRFSDQVLYSLAWDFIFSFSELMSKLNIRYWLDYGTLLGLVRDNDLISWDSDLDFCILDE
NKGYLINSFSVISEHISSTIGCDVKIELIKGVECEHSRVFISCNRDNVILDIDVFIKFNFSNFVCLEVMDRVERYNTEHY
VAVDFLNVKGISLPVPNKYDQYLTRVYGSWCVANKEWTLYS
>Mature_281_residues
MVKYSGVCILFGAGGGGENALSLLKLEGCNISAIVDNDLKKHNTFLDDTPIYAPEKLNCDLIFDKILIASGYSKSILAQL
GQYNISQERIIVLPQYYLKPNRFSDQVLYSLAWDFIFSFSELMSKLNIRYWLDYGTLLGLVRDNDLISWDSDLDFCILDE
NKGYLINSFSVISEHISSTIGCDVKIELIKGVECEHSRVFISCNRDNVILDIDVFIKFNFSNFVCLEVMDRVERYNTEHY
VAVDFLNVKGISLPVPNKYDQYLTRVYGSWCVANKEWTLYS

Specific function: Unknown

COG id: COG3475

COG function: function code M; LPS biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32149; Mature: 32149

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKYSGVCILFGAGGGGENALSLLKLEGCNISAIVDNDLKKHNTFLDDTPIYAPEKLNCD
CEEECCEEEEEECCCCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCE
LIFDKILIASGYSKSILAQLGQYNISQERIIVLPQYYLKPNRFSDQVLYSLAWDFIFSFS
EEEEEEHEECCCCHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHH
ELMSKLNIRYWLDYGTLLGLVRDNDLISWDSDLDFCILDENKGYLINSFSVISEHISSTI
HHHHHCCEEEEEEHHHEEEEEECCCEEEECCCCCEEEEECCCCEEEEHHHHHHHHHHHHC
GCDVKIELIKGVECEHSRVFISCNRDNVILDIDVFIKFNFSNFVCLEVMDRVERYNTEHY
CCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEECCCCEEHHHHHHHHHHCCCCEE
VAVDFLNVKGISLPVPNKYDQYLTRVYGSWCVANKEWTLYS
EEEEEEEECEEECCCCCHHHHHHHHHHHCEEEECCCEEEEC
>Mature Secondary Structure
MVKYSGVCILFGAGGGGENALSLLKLEGCNISAIVDNDLKKHNTFLDDTPIYAPEKLNCD
CEEECCEEEEEECCCCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCE
LIFDKILIASGYSKSILAQLGQYNISQERIIVLPQYYLKPNRFSDQVLYSLAWDFIFSFS
EEEEEEHEECCCCHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHH
ELMSKLNIRYWLDYGTLLGLVRDNDLISWDSDLDFCILDENKGYLINSFSVISEHISSTI
HHHHHCCEEEEEEHHHEEEEEECCCEEEECCCCCEEEEECCCCEEEEHHHHHHHHHHHHC
GCDVKIELIKGVECEHSRVFISCNRDNVILDIDVFIKFNFSNFVCLEVMDRVERYNTEHY
CCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEECCCCEEHHHHHHHHHHCCCCEE
VAVDFLNVKGISLPVPNKYDQYLTRVYGSWCVANKEWTLYS
EEEEEEEECEEECCCCCHHHHHHHHHHHCEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA