| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120598210
Identifier: 120598210
GI number: 120598210
Start: 1576669
End: 1577724
Strand: Direct
Name: 120598210
Synonym: Sputw3181_1387
Alternate gene names: NA
Gene position: 1576669-1577724 (Clockwise)
Preceding gene: 120598209
Following gene: 120598211
Centisome position: 33.49
GC content: 39.77
Gene sequence:
>1056_bases ATGAATTGGCTTTGGGATCACTCCATATTCGCTTTGCCACAGGTTGAGAAGGAAGCGCTGTTATTAGCTGAATTGAATAA GCTGACCTCTCATCACGAGGTCAACTGTCCTAGCTTTGCTAATATATTAAGAGCATTTCACTGGGGACATAGTGAGGATT ATGCCCAGCTACCTTATCTTGCTTGCCGACTTTTTAAGTTGATGAAGTTACAAAGTATTCCCGATGCGAAAATATTCAAA ATGATCAGTTCATCAGGGACTACGGGGGCTGCATCTCAAATAGTGCTTGATAGAGAAACGGCTTCGTTACAGACAAAAGT ATTGGTTAAGATCCTTCAAGAGTTTATCGGAAAACAGCGACTGCCAATGCTGTTGATTGAAAAAACATCACTCGTACAAA ATAGAAATGATTTTTCGGCCAGAGGAGCTGGCGCTGTTGGCCTATCATTTCTCGGTCGAGATCATACCTATGCTCTAGAT AGCAATATGCAACCAGATTGGAAAACCATAGATGCTTTTTGTGAACGGTATTCAAATCAACCCATCATTTTATTTGGTTT TACCTTTATGGTATGGGAACACTTTTTAGAACAAATAAAAAAAAGAGGACACAAATTATCTTTTGAACAAGGAATATTAT TTCACAGTGGCGGATGGAAAAAGTTGCAACATAAGGCAGTTGATAATGCGACATTTAAAATGCAATGTAGCGAATGGTTA GGTATTGCTAAAGTCCATAATTTTTATGGGATGGCTGAGCAAATAGGTTCAATTTTTGTTGAGTGTGAATCGGGCCATTT ACATGCTCCACTTTATTCAGATGTGATAATCAGAGAGCCTACGACCTTAGCCCCTTTACCCATAGGCAAAGAGGGGCTAA TACAAGTGCTTTCGGCAATCCCTAAAAGTTACCCAGGACATTCACTATTAACAGAAGATATTGGGCGAATAATTGGGATT GATAATTGTTGCTGTGGTCGTAAGGGACAGTATTTTGAAGTGATTGGACGTCAAAAAGGCGCAGAGGTCAGGGGATGCAG CGATACATTTCAATAA
Upstream 100 bases:
>100_bases CTATTAACGTGATTAAGTTCATCCTTGTTCCTGTTTTGCCTCGAACTTCAAATCTTAAGATTGACTATAATACGCTGCCG CAATTATTGGAGTCATCATC
Downstream 100 bases:
>100_bases ACCAAGCTTTAGATGCTCCTGAAGTCGAACATTTACTTAGAGGACAAACCGGGACTCGATTTAATCCTGTCCCTTTAGCC TGTTTTGCGCCTGTTATTAG
Product: acyl-protein synthetase, LuxE
Products: NA
Alternate protein names: Long-Chain-Fatty-Acid-Luciferin-Component Ligase; Acyl-Protein Synthetase; Acyl Protein Synthase/Acyl-CoA Reductase RfbN; Acyl Protein Synthase/Acyl-CoA Reductase-Like Protein; LuxE Family Acyl-Protein Synthetase; Acyl Protein Synthase/Acyl-CoA Reductase
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNWLWDHSIFALPQVEKEALLLAELNKLTSHHEVNCPSFANILRAFHWGHSEDYAQLPYLACRLFKLMKLQSIPDAKIFK MISSSGTTGAASQIVLDRETASLQTKVLVKILQEFIGKQRLPMLLIEKTSLVQNRNDFSARGAGAVGLSFLGRDHTYALD SNMQPDWKTIDAFCERYSNQPIILFGFTFMVWEHFLEQIKKRGHKLSFEQGILFHSGGWKKLQHKAVDNATFKMQCSEWL GIAKVHNFYGMAEQIGSIFVECESGHLHAPLYSDVIIREPTTLAPLPIGKEGLIQVLSAIPKSYPGHSLLTEDIGRIIGI DNCCCGRKGQYFEVIGRQKGAEVRGCSDTFQ
Sequences:
>Translated_351_residues MNWLWDHSIFALPQVEKEALLLAELNKLTSHHEVNCPSFANILRAFHWGHSEDYAQLPYLACRLFKLMKLQSIPDAKIFK MISSSGTTGAASQIVLDRETASLQTKVLVKILQEFIGKQRLPMLLIEKTSLVQNRNDFSARGAGAVGLSFLGRDHTYALD SNMQPDWKTIDAFCERYSNQPIILFGFTFMVWEHFLEQIKKRGHKLSFEQGILFHSGGWKKLQHKAVDNATFKMQCSEWL GIAKVHNFYGMAEQIGSIFVECESGHLHAPLYSDVIIREPTTLAPLPIGKEGLIQVLSAIPKSYPGHSLLTEDIGRIIGI DNCCCGRKGQYFEVIGRQKGAEVRGCSDTFQ >Mature_351_residues MNWLWDHSIFALPQVEKEALLLAELNKLTSHHEVNCPSFANILRAFHWGHSEDYAQLPYLACRLFKLMKLQSIPDAKIFK MISSSGTTGAASQIVLDRETASLQTKVLVKILQEFIGKQRLPMLLIEKTSLVQNRNDFSARGAGAVGLSFLGRDHTYALD SNMQPDWKTIDAFCERYSNQPIILFGFTFMVWEHFLEQIKKRGHKLSFEQGILFHSGGWKKLQHKAVDNATFKMQCSEWL GIAKVHNFYGMAEQIGSIFVECESGHLHAPLYSDVIIREPTTLAPLPIGKEGLIQVLSAIPKSYPGHSLLTEDIGRIIGI DNCCCGRKGQYFEVIGRQKGAEVRGCSDTFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39559; Mature: 39559
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWLWDHSIFALPQVEKEALLLAELNKLTSHHEVNCPSFANILRAFHWGHSEDYAQLPYL CCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH ACRLFKLMKLQSIPDAKIFKMISSSGTTGAASQIVLDRETASLQTKVLVKILQEFIGKQR HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHEEEEECHHHHHHHHHHHHHHHHHHCCCC LPMLLIEKTSLVQNRNDFSARGAGAVGLSFLGRDHTYALDSNMQPDWKTIDAFCERYSNQ CCEEEEEHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCC PIILFGFTFMVWEHFLEQIKKRGHKLSFEQGILFHSGGWKKLQHKAVDNATFKMQCSEWL CEEEEHHHHHHHHHHHHHHHHCCCCCCHHCCEEEECCCHHHHHHHHHCCCEEEEEHHHHH GIAKVHNFYGMAEQIGSIFVECESGHLHAPLYSDVIIREPTTLAPLPIGKEGLIQVLSAI HHHHHHHHHHHHHHHCCEEEEECCCCEECCHHHCEEEECCCCCCCCCCCHHHHHHHHHHC PKSYPGHSLLTEDIGRIIGIDNCCCGRKGQYFEVIGRQKGAEVRGCSDTFQ CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNWLWDHSIFALPQVEKEALLLAELNKLTSHHEVNCPSFANILRAFHWGHSEDYAQLPYL CCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH ACRLFKLMKLQSIPDAKIFKMISSSGTTGAASQIVLDRETASLQTKVLVKILQEFIGKQR HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHEEEEECHHHHHHHHHHHHHHHHHHCCCC LPMLLIEKTSLVQNRNDFSARGAGAVGLSFLGRDHTYALDSNMQPDWKTIDAFCERYSNQ CCEEEEEHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCC PIILFGFTFMVWEHFLEQIKKRGHKLSFEQGILFHSGGWKKLQHKAVDNATFKMQCSEWL CEEEEHHHHHHHHHHHHHHHHCCCCCCHHCCEEEECCCHHHHHHHHHCCCEEEEEHHHHH GIAKVHNFYGMAEQIGSIFVECESGHLHAPLYSDVIIREPTTLAPLPIGKEGLIQVLSAI HHHHHHHHHHHHHHHCCEEEEECCCCEECCHHHCEEEECCCCCCCCCCCHHHHHHHHHHC PKSYPGHSLLTEDIGRIIGIDNCCCGRKGQYFEVIGRQKGAEVRGCSDTFQ CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA