| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120598192
Identifier: 120598192
GI number: 120598192
Start: 1556108
End: 1556344
Strand: Direct
Name: 120598192
Synonym: Sputw3181_1369
Alternate gene names: NA
Gene position: 1556108-1556344 (Clockwise)
Preceding gene: 120598191
Following gene: 120598196
Centisome position: 33.05
GC content: 47.26
Gene sequence:
>237_bases GTGGCTCCCGAAGGGCGGGTTGCAACGCGCTTTATACTGCGTTCAAGGCTTTCGACAGAGCACCACTATGCCTTCAAGCC TTCGCCTTGTCTAAAGCGCGTTGAACTCCCGCTGAATGAACAGATATTTAATACGATTGGTATAATATTCACGGCCAATG GAGTCACGGTAGTCAGATCAAAAGGTTTAAGTGAACGCTTAAGAGGCGTGGTTGCAGTGATTGAGTGTATTGGTTAA
Upstream 100 bases:
>100_bases AATCAGTTCAGAGCCTCACAGGCATCTCAATCCAAGGCGCATTGACGCAGAAATGGTCATTCCCTTTTAAGTCAATGCAA CACGGGAGTGGGATGCCTGT
Downstream 100 bases:
>100_bases GTCAACGCAATAAAAATGCCACCCAATGTGGATGGCATTTGATAAACAACTCATTCATTAGTCAAATTAGGCTTTAAATT GGCTTATTTGACGTTTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MAPEGRVATRFILRSRLSTEHHYAFKPSPCLKRVELPLNEQIFNTIGIIFTANGVTVVRSKGLSERLRGVVAVIECIG
Sequences:
>Translated_78_residues MAPEGRVATRFILRSRLSTEHHYAFKPSPCLKRVELPLNEQIFNTIGIIFTANGVTVVRSKGLSERLRGVVAVIECIG >Mature_77_residues APEGRVATRFILRSRLSTEHHYAFKPSPCLKRVELPLNEQIFNTIGIIFTANGVTVVRSKGLSERLRGVVAVIECIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8665; Mature: 8534
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPEGRVATRFILRSRLSTEHHYAFKPSPCLKRVELPLNEQIFNTIGIIFTANGVTVVRS CCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHEEEECCCEEEEEC KGLSERLRGVVAVIECIG CCHHHHHHHHHHHHHHCC >Mature Secondary Structure APEGRVATRFILRSRLSTEHHYAFKPSPCLKRVELPLNEQIFNTIGIIFTANGVTVVRS CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHEEEECCCEEEEEC KGLSERLRGVVAVIECIG CCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA